24 c1oidA_ Probab=99.63   E-value=4e-14  Score=104.29  Aligned_columns=246  Identities=16%

Q ss_pred             CEEEEEEHHH--CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE-ECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCE
Q ss_conf             9679950010--68854582247999999999999998639979999-58444899999899999999999998469959
Q batch____         1 MRILHTSDWH--LGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIV-AGDVFDTGSPPSYARTLYNRFVVNLQQTGCHL   77 (400)
Q Consensus         1 Mkilh~sDlH--LG~~~~~~~r~~~~~~~~~~i~~~a~~~~vD~vli-aGDlfd~~~~~~~~~~~~~~~l~~l~~~~ipv   77 (400)
                      ++|||+||+|  +....+...........++++.+.+..++++.+++ +||+|+..  ....+......++.|...++.+
T Consensus         9 l~il~~sD~H~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~i~~GD~~~gs--~~~~~~~g~~~~~~ln~~g~d~   86 (525)
T c1oidA_           9 ITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGV--PESDLQDAEPDFRGMNLVGYDA   86 (525)
T ss_dssp             EEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSC--HHHHTTTTHHHHHHHHHHTCCE
T ss_pred             EEEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC--CHHHHCCCHHHHHHHHHCCCCE
T ss_conf             99999828023011577655785668999999999987259989999758777787--3553128678999997479979


Q ss_pred             EEECCCCCCCCCCHHHHHHHHHCCCEEEC----------CCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHCCCCCCC
Q ss_conf             99858887753101356555318969922----------57766158884069720799830257734310101467753
Q batch____        78 VVLAGNHDSVATLNESRDIMAFLNTTVVA----------SAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGI  147 (400)
Q Consensus        78 ~~i~GNHD~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  147 (400)
                      + ++||||.......+..+....+...+.          ....+..++........+.-...+............+....
T Consensus        87 ~-~~GNHefd~g~~~l~~~~~~~~~~~l~aNi~~~~~~~~~~~p~~i~~~~g~ki~iiG~~~~~~~~~~~~~~~~~~~~~  165 (525)
T c1oidA_          87 M-AIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTDIEFR  165 (525)
T ss_dssp             E-ECCGGGGSSCHHHHHHHHHHCSSCEECSSEEETTTCCBSSCCEEEEEETTEEEEEEEEECTTHHHHSCGGGGTTEEEC
T ss_pred             E-EECCCCCCCCHHHHHHHHHHCCCCEEEECCEECCCCCCCCCCEEEEEECCEEEEEEEEECCCCCCCCCCCCCCCEEEC
T ss_conf             9-945730018999999999872998898222006788654166699996891799999632454433475555881882


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCHHHCCCCCEEEEECCCCCE
Q ss_conf             10245776688899888998874025778659999823225877768600012387533596773898199991475427
Q batch____       148 EKQQHLLAAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQ  227 (400)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~~H~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~dyvalGH~H~~~  227 (400)
                      ...+.....+.....          ......+|+++|.++..........+........+...   ++|+++.||.|.+.
T Consensus       166 d~~e~~~~~~~~l~~----------~~~~D~iI~l~H~g~~~~~~~~~~~~~~~~~~~~~~~~---~vD~ii~GH~H~~~  232 (525)
T c1oidA_         166 KPADEAKLVIQELQQ----------TEKPDIIIAATHMGHYDNGEHGCNAPGDVEMARALPAG---SLAMIVGGHSQDPV  232 (525)
T ss_dssp             CHHHHHHHHHHHHHH----------TTCCSEEEEEEESCCCGGGCCTTSCCCHHHHHHHSCTT---SSSEEECCSSCCBC
T ss_pred             CHHHHHHHHHHHHHH----------CCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCC---CCEEEEECCCCCEE
T ss_conf             799999999999985----------28986999983178877676643342058889732447---94199867877331


Q ss_pred             EECCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf             8779973675598410465535788628999964997
Q batch____       228 IIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGK  264 (400)
Q Consensus       228 ~~~~~~~~~Y~GSp~~~~f~E~~~~kg~~lv~~~~~~  264 (400)
                      .....  -....+..+....+.+..+|+.+|......
T Consensus       233 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~vv~ag~~~  267 (525)
T c1oidA_         233 CMAAE--NKKQVDYVPGTPCKPDQQNGIWIVQAHEWG  267 (525)
T ss_dssp             CEEET--TEECSSCCTTSCCCCEEETTEEEECBCSTT
T ss_pred             CCCCC--CCCCCCCCCCCCCCCCCCCCEEEEECCCCC
T ss_conf             13466--765555456653355677742899607882