Email l.a.kelley@imperial.ac.uk Description P40710 Date Thu Jan 5 12:01:13 GMT 2012 Unique Job ID e36d1a927fa628c6

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2z4hB_ 100.0 100 PDB header:signaling protein activator Chain: B: PDB Molecule:copper homeostasis protein cutf; PDBTitle: crystal structure of the cpx pathway activator nlpe from2 escherichia coli 2 c3lhnB_ 100.0 36 PDB header:lipid binding protein Chain: B: PDB Molecule:lipoprotein; PDBTitle: crystal structure of putative lipoprotein (np_718719.1) from2 shewanella oneidensis at 1.42 a resolution 3 d1jiwi_ 74.1 16 Fold:Streptavidin-like Superfamily:beta-Barrel protease inhibitors Family:Metalloprotease inhibitor 4 c3ge2A_ 65.8 16 PDB header:lipoprotein Chain: A: PDB Molecule:lipoprotein, putative; PDBTitle: crystal structure of putative lipoprotein sp_0198 from streptococcus2 pneumoniae 5 c3p02A_ 34.4 8 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a protein of unknown function (bacova_00267) from2 bacteroides ovatus at 1.55 a resolution 6 d2q4ma1 27.2 29 Fold:Tubby C-terminal domain-like Superfamily:Tubby C-terminal domain-like Family:At5g01750-like 7 c1zxuA_ 27.2 29 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:at5g01750 protein; PDBTitle: x-ray structure of protein from arabidopsis thaliana2 at5g01750 8 c3o0rC_ 22.9 11 PDB header:immune system/oxidoreductase Chain: C: PDB Molecule:nitric oxide reductase subunit c; PDBTitle: crystal structure of nitric oxide reductase from pseudomonas2 aeruginosa in complex with antibody fragment 9 c1brvA_ 18.2 47 PDB header:glycoprotein Chain: A: PDB Molecule:protein g; PDBTitle: solution nmr structure of the immunodominant region of2 protein g of bovine respiratory syncytial virus, 483 structures 10 d1jhna4 18.0 21 Fold:Concanavalin A-like lectins/glucanases Superfamily:Concanavalin A-like lectins/glucanases Family:Calnexin/calreticulin 11 d1hxra_ 17.6 86 Fold:Mss4-like Superfamily:Mss4-like Family:RabGEF Mss4 12 c3p43A_ 17.4 19 PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: structure and activities of archaeal members of the ligd 3'2 phosphoesterase dna repair enzyme superfamily 13 d2fu5a1 17.4 86 Fold:Mss4-like Superfamily:Mss4-like Family:RabGEF Mss4 14 d1rc9a2 15.3 57 Fold:Crisp domain-like Superfamily:Crisp domain-like Family:Crisp domain 15 c1nuiA_ 15.3 24 PDB header:replication Chain: A: PDB Molecule:dna primase/helicase; PDBTitle: crystal structure of the primase fragment of bacteriophage t7 primase-2 helicase protein 16 d2fm8a1 15.2 17 Fold:Secretion chaperone-like Superfamily:Type III secretory system chaperone-like Family:Type III secretory system chaperone 17 d2hh8a1 15.1 6 Fold:YdfO-like Superfamily:YdfO-like Family:YdfO-like 18 c2l6nA_ 14.1 43 PDB header:structure genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein yp_001092504.1; PDBTitle: nmr solution structure of the protein yp_001092504.1 19 c3hyxC_ 13.9 56 PDB header:oxidoreductase Chain: C: PDB Molecule:sulfide-quinone reductase; PDBTitle: 3-d x-ray structure of the sulfide:quinone oxidoreductase from aquifex2 aeolicus in complex with aurachin c 20 c3rg0A_ 13.8 21 PDB header:chaperone Chain: A: PDB Molecule:calreticulin; PDBTitle: structural and functional relationships between the lectin and arm2 domains of calreticulin 21 c2bx9J_ not modelled 12.9 38 PDB header:transcription regulation Chain: J: PDB Molecule:tryptophan rna-binding attenuator protein-inhibitory PDBTitle: crystal structure of b.subtilis anti-trap protein, an2 antagonist of trap-rna interactions 22 d1j8ra_ not modelled 12.6 16 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:Bacterial adhesins Family:PapG adhesin receptor-binding domain 23 c2l6pA_ not modelled 11.5 43 PDB header:structure genomics, unknown function Chain: A: PDB Molecule:phac1, phac2 and phad genes; PDBTitle: nmr solution structure of the protein np_253742.1 24 c2ktsA_ not modelled 10.8 25 PDB header:chaperone Chain: A: PDB Molecule:heat shock protein hslj; PDBTitle: nmr structure of the protein np_415897.1 25 c1jhnA_ not modelled 10.4 21 PDB header:chaperone Chain: A: PDB Molecule:calnexin; PDBTitle: crystal structure of the lumenal domain of calnexin 26 d1oyvi_ not modelled 10.0 29 Fold:Plant proteinase inhibitors Superfamily:Plant proteinase inhibitors Family:Plant proteinase inhibitors 27 d1r7aa1 not modelled 9.9 30 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain 28 c2ovsB_ not modelled 9.8 8 PDB header:gene regulation, ligand binding protein Chain: B: PDB Molecule:l0044; PDBTitle: crystal strcuture of a type three secretion system protein 29 d2eppa1 not modelled 9.2 45 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 30 d2dsya1 not modelled 8.8 24 Fold:TTHA1013/TTHA0281-like Superfamily:TTHA1013/TTHA0281-like Family:TTHA0281-like 31 c2dcrA_ not modelled 8.2 18 PDB header:transferase Chain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase fes/fps; PDBTitle: fully automated solution structure determination of the fes2 sh2 domain 32 c3kg9A_ not modelled 8.1 11 PDB header:lyase Chain: A: PDB Molecule:curk; PDBTitle: dehydratase domain from curk module of curacin polyketide synthase 33 d1vlya1 not modelled 8.1 16 Fold:Elongation factor/aminomethyltransferase common domain Superfamily:Aminomethyltransferase beta-barrel domain Family:Aminomethyltransferase beta-barrel domain 34 d2aqaa1 not modelled 8.1 40 Fold:Rubredoxin-like Superfamily:Nop10-like SnoRNP Family:Nucleolar RNA-binding protein Nop10-like 35 d2bpa2_ not modelled 8.0 29 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:ssDNA viruses Family:Microviridae-like VP 36 c3luuA_ not modelled 7.9 60 PDB header:biosynthetic protein Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of protein with unknown function which belongs to2 pfam duf971 family (afe_2189) from acidithiobacillus ferrooxidans3 atcc 23270 at 1.93 a resolution 37 d1w0na_ not modelled 7.9 25 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:Family 36 carbohydrate binding module, CBM36 38 d1o6da_ not modelled 7.9 24 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:YbeA-like 39 d1wgea1 not modelled 7.9 38 Fold:Rubredoxin-like Superfamily:CSL zinc finger Family:CSL zinc finger 40 d1gff2_ not modelled 7.8 36 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:ssDNA viruses Family:Microviridae-like VP 41 c1n1uA_ not modelled 7.6 25 PDB header:antibiotic Chain: A: PDB Molecule:kalata b1; PDBTitle: nmr structure of [ala1,15]kalata b1 42 d1n1ua_ not modelled 7.6 25 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Cyclotides Family:Kalata B1 43 c1r8oA_ not modelled 7.6 38 PDB header:hydrolase inhibitor Chain: A: PDB Molecule:kunitz trypsin inhibitor; PDBTitle: crystal structure of an unusual kunitz-type trypsin inhibitor from2 copaifera langsdorffii seeds 44 c3cjtP_ not modelled 7.5 6 PDB header:transferase/ribosomal protein Chain: P: PDB Molecule:50s ribosomal protein l11; PDBTitle: ribosomal protein l11 methyltransferase (prma) in complex with2 dimethylated ribosomal protein l11 45 c3ld0Q_ not modelled 7.4 38 PDB header:gene regulation Chain: Q: PDB Molecule:inhibitor of trap, regulated by t-box (trp) sequence rtpa; PDBTitle: crystal structure of b.licheniformis anti-trap protein, an antagonist2 of trap-rna interactions 46 d2gvia2 not modelled 7.4 67 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:FwdE C-terminal domain-like 47 c3n9dA_ not modelled 7.3 17 PDB header:ligase Chain: A: PDB Molecule:probable atp-dependent dna ligase; PDBTitle: monoclinic structure of p. aeruginosa ligd phosphoesterase domain 48 d1mila_ not modelled 7.2 25 Fold:SH2-like Superfamily:SH2 domain Family:SH2 domain 49 d1ns5a_ not modelled 7.2 24 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:YbeA-like 50 c2knnA_ not modelled 7.2 50 PDB header:plant protein Chain: A: PDB Molecule:cycloviolacin-o2; PDBTitle: solution structure of the cyclotide cycloviolacin o2 with2 glu6 methylated (cyo2me) 51 c2qn4B_ not modelled 7.2 29 PDB header:hydrolase inhibitor Chain: B: PDB Molecule:alpha-amylase/subtilisin inhibitor; PDBTitle: structure and function study of rice bifunctional alpha-2 amylase/subtilisin inhibitor from oryza sativa 52 d1to0a_ not modelled 7.1 24 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:YbeA-like 53 d1vh0a_ not modelled 7.1 18 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:YbeA-like 54 c2f2iA_ not modelled 6.8 25 PDB header:antimicrobial protein Chain: A: PDB Molecule:kalata-b1; PDBTitle: solution structure of [p20d,v21k]-kalata b1 55 d1avwb_ not modelled 6.7 57 Fold:beta-Trefoil Superfamily:STI-like Family:Kunitz (STI) inhibitors 56 d1nb1a_ not modelled 6.6 25 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Cyclotides Family:Kalata B1 57 d1ha8a_ not modelled 6.6 63 Fold:Pheromone ER-23 Superfamily:Pheromone ER-23 Family:Pheromone ER-23 58 d1lrva_ not modelled 6.6 38 Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:Leucine-rich repeat variant 59 c3o6uB_ not modelled 6.6 15 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein cpe2226; PDBTitle: crystal structure of cpe2226 protein from clostridium perfringens.2 northeast structural genomics consortium target cpr195 60 d1fnoa3 not modelled 6.5 9 Fold:Ferredoxin-like Superfamily:Bacterial exopeptidase dimerisation domain Family:Bacterial exopeptidase dimerisation domain 61 d1pt4a_ not modelled 6.5 25 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Cyclotides Family:Kalata B1 62 c2l6lA_ not modelled 6.5 18 PDB header:chaperone Chain: A: PDB Molecule:dnaj homolog subfamily c member 24; PDBTitle: solution structure of human j-protein co-chaperone, dph4 63 c2kzxA_ not modelled 6.5 8 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of a3dht5 from clostridium thermocellum,2 northeast structural genomics consortium target cmr116 64 d1cf1a1 not modelled 6.4 29 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Arrestin/Vps26-like 65 c2f2jA_ not modelled 6.4 25 PDB header:antimicrobial protein Chain: A: PDB Molecule:kalata-b1; PDBTitle: solution structure of [w19k, p20n, v21k]-kalata b1 66 c2zkrk_ not modelled 6.3 9 PDB header:ribosomal protein/rna Chain: K: PDB Molecule:rna expansion segment es19; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 67 c2khbA_ not modelled 6.3 25 PDB header:antimicrobial protein Chain: A: PDB Molecule:kalata-b1; PDBTitle: solution structure of linear kalata b1 (loop 6) 68 c1iebD_ not modelled 6.0 20 PDB header:histocompatibility antigen Chain: D: PDB Molecule:mhc class ii i-ek; PDBTitle: histocompatibility antigen 69 d1m3va1 not modelled 6.0 57 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain 70 d1r8na_ not modelled 5.8 36 Fold:beta-Trefoil Superfamily:STI-like Family:Kunitz (STI) inhibitors 71 d1mmsa2 not modelled 5.7 6 Fold:Ribosomal L11/L12e N-terminal domain Superfamily:Ribosomal L11/L12e N-terminal domain Family:Ribosomal L11/L12e N-terminal domain 72 c2xvoB_ not modelled 5.7 32 PDB header:structural genomics Chain: B: PDB Molecule:sso1725; PDBTitle: sso1725, a protein involved in the crispr/cas pathway 73 d1vqok1 not modelled 5.7 14 Fold:Ribosomal protein L14 Superfamily:Ribosomal protein L14 Family:Ribosomal protein L14 74 c3swrA_ not modelled 5.6 14 PDB header:transferase Chain: A: PDB Molecule:dna (cytosine-5)-methyltransferase 1; PDBTitle: structure of human dnmt1 (601-1600) in complex with sinefungin 75 d3cjsb1 not modelled 5.6 6 Fold:Ribosomal L11/L12e N-terminal domain Superfamily:Ribosomal L11/L12e N-terminal domain Family:Ribosomal L11/L12e N-terminal domain 76 d1v1qa_ not modelled 5.5 14 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB 77 d2hz5a1 not modelled 5.4 26 Fold:Profilin-like Superfamily:Roadblock/LC7 domain Family:Roadblock/LC7 domain 78 c2jmbA_ not modelled 5.4 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein atu4866; PDBTitle: solution structure of the protein atu4866 from agrobacterium2 tumefaciens 79 d1whia_ not modelled 5.4 23 Fold:Ribosomal protein L14 Superfamily:Ribosomal protein L14 Family:Ribosomal protein L14 80 d1sg1x2 not modelled 5.3 31 Fold:TNF receptor-like Superfamily:TNF receptor-like Family:TNF receptor-like 81 c2p57A_ not modelled 5.3 55 PDB header:metal binding protein Chain: A: PDB Molecule:gtpase-activating protein znf289; PDBTitle: gap domain of znf289, an id1-regulated zinc finger protein 82 c2p3yA_ not modelled 5.3 25 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein vpa0735; PDBTitle: crystal structure of vpa0735 from vibrio parahaemolyticus. northeast2 structural genomics target vpr109 83 d2p3ya1 not modelled 5.3 25 Fold:VPA0735-like Superfamily:VPA0735-like Family:VPA0735-like 84 d2f2ha1 not modelled 5.3 27 Fold:Putative glucosidase YicI, C-terminal domain Superfamily:Putative glucosidase YicI, C-terminal domain Family:Putative glucosidase YicI, C-terminal domain 85 d1tiea_ not modelled 5.3 29 Fold:beta-Trefoil Superfamily:STI-like Family:Kunitz (STI) inhibitors 86 d1eyla_ not modelled 5.3 43 Fold:beta-Trefoil Superfamily:STI-like Family:Kunitz (STI) inhibitors 87 c3g12A_ not modelled 5.2 38 PDB header:lyase Chain: A: PDB Molecule:putative lactoylglutathione lyase; PDBTitle: crystal structure of a putative lactoylglutathione lyase2 from bdellovibrio bacteriovorus 88 d3bx1c1 not modelled 5.1 29 Fold:beta-Trefoil Superfamily:STI-like Family:Kunitz (STI) inhibitors 89 c1y7jA_ not modelled 5.1 80 PDB header:signaling protein Chain: A: PDB Molecule:agouti signaling protein; PDBTitle: nmr structure family of human agouti signalling protein (80-2 132: q115y, s124y) 90 c2owaB_ not modelled 5.1 27 PDB header:protein transport Chain: B: PDB Molecule:arfgap-like finger domain containing protein; PDBTitle: crystal structure of putative gtpase activating protein for2 adp ribosylation factor from cryptosporidium parvum3 (cgd5_1040) 91 c2dreA_ not modelled 5.1 36 PDB header:plant protein Chain: A: PDB Molecule:water-soluble chlorophyll protein; PDBTitle: crystal structure of water-soluble chlorophyll protein from2 lepidium virginicum at 2.00 angstrom resolution