PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2zkrk_

Fold library id	PDB Header	Molecule	Title
c2zkrk_	PDB header: ribosomal protein/rna	Chain: K: PDB Molecule: rna expansion segment es19;	PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map

Links to external resources
Added to library: Tue Mar 16 12:54:53 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence I S L G L P V G A V I N C A D N T G A K N L Y I I S V K G I K G R L N R L P A A G V G D M V M A T V K K G K P E L R K K V H P A V V I R Q R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
B S S S T T
T T
T T
T T T T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . .

Sequence K S Y R R K D G V F L Y F E D N A G V I V N N K G E M K G S A I T G P V A K E C A D L W P R I A S N A G S I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T S
S S
B
T T S
B S S S
B
S
T T
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	I	S	L	G	L	P	V	G	A	V	I	N	C	A	D	N	T	G	A	K	N	L	Y	I	I	S	V	K	G	I	K	G	R	L	N	R	L	P	A	A	G	V	G	D	M	V	M	A	T	V	K	K	G	K	P	E	L	R	K	K	V	H	P	A	V	V	I	R	Q	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T							B	S	S	S										T	T					T	T							T	T												T	T	T	T	T											S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Sequence	K	S	Y	R	R	K	D	G	V	F	L	Y	F	E	D	N	A	G	V	I	V	N	N	K	G	E	M	K	G	S	A	I	T	G	P	V	A	K	E	C	A	D	L	W	P	R	I	A	S	N	A	G	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					T	T	S						S	S						B		T	T	S		B	S	S	S		B		S															T	T		S