Job Description P0A821 Confidence 99.69% Date Thu Jan 5 11:06:39 GMT 2012 Rank 231 Aligned Residues 295 % Identity 10% Template d2hoxa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.40

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		132	.	.	.	.	.	.	.	140	.	.									.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.										170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Query Sequence		R	A	L	A	Q	L	L	C	R	I	T	.	.	.	.	.	.	.	.	G	A	E	D	A	C	I	V	N	N	N	A	A	A	V	L	L	M	L	A	A	T	A	S	G	K	E	.	.	.	.	.	.	.	.	.	V	V	V	S	R	G	E	L	V	E	I	G	G	A	F	R	I	P	D	V	M	R	Q	A	G
Query Conservation													.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.
Template Sequence		F	E	L	E	K	T	I	K	E	L	H	E	V	V	G	N	A	A	A	K	D	R	Y	I	V	F	G	V	G	V	T	Q	L	I	H	G	L	V	I	S	L	S	P	N	M	T	A	T	P	D	A	P	E	S	K	V	V	A	H	A	P	F	Y	P	V	F	.	.	.	.	.	.	R	E	Q	T	K	Y	F	D
Template Known Secondary structure																T		B			T	T							S														S			T	T	T		T	T	S									S	S						.	.	.	.	.	.							S
Template Predicted Secondary structure																																																																				.	.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.							.	170	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	T	L	H	E	V	G	T	T	N	R	T	H	A	N	D	Y	R	Q	A	V	N	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L	V	A	L	G	K	E	L	D	V	P	V	V	T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K
Query Conservation
Alig confidence									.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation									.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Sequence		K	K	G	Y	V	W	A	.	.	.	.	G	N	A	A	N	Y	V	N	V	S	N	P	E	Q	Y	I	E	M	V	T	S	P	N	N	P	E	G	L	L	R	H	.	.	.	.	.	.	.	.	.	.	.	A	V	I	K	G	C	K	S	I	Y	D	M	V	Y	Y	W	P	H	Y	T	P	.	.	.	.	.	.
Template Known Secondary structure			T	T					.	.	.	.			G	G	G	G	T	T		S		G	G	G							S	S		T	T	T						.	.	.	.	.	.	.	.	.	.	.		S	S	T	T								T	T		S	T	T	T	S		.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.					.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.												.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D	K	L	L	G	G	P	Q	A	G	I	.	I	V	G	K	K	E	M	I	A	R	L	Q	S	H	P	L	K	R	A	L	R	A	D	K	M	T	L	A	A	L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T
Query Conservation																																.
Alig confidence		.	.	.																												.																																					.	.	.	.	.
Template Conservation		.	.	.																																																																	.	.	.	.	.
Template Sequence		.	.	.	I	K	Y	K	A	D	E	D	I	L	L	F	T	M	S	K	F	T	G	H	S	G	S	R	F	G	W	A	L	I	K	D	E	S	V	Y	N	N	L	L	N	Y	M	T	K	N	T	E	G	T	P	R	E	T	Q	L	R	S	L	K	V	L	K	E	.	.	.	.	.	V	V	A	M	V	K	T	Q
Template Known Secondary structure		.	.	.			S		B			S										T	S		G	G	G																								T	S	S																.	.	.	.	.
Template Predicted Secondary structure		.	.	.																																																																	.	.	.	.	.
Template SS confidence
					236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.						300	.	.	.	.	.	.	.
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	L	L	T	R	S	A	E	V	I	Q	I	Q	A	Q	R	L	Q	A	P	L	A	A	H	Y	G	A	E	F	A	V	Q	V	M	P	C	L	S	Q	I	G	S	G	S	L	P	V	D	R	L	P	S	A	A	L	T	F	T	P	H	D	G	R	G	S	H	L	E	S	L	A	A	R	W	R	E	L	P	V
Query Conservation
Alig confidence																																																																		.	.
Template Conservation																																																																		.	.
Template Sequence		K	G	T	M	R	D	L	N	T	F	G	F	K	K	L	R	E	R	W	V	N	I	T	A	L	L	D	Q	S	D	R	F	S	Y	Q	E	L	P	Q	S	E	Y	C	N	Y	F	R	R	M	R	P	P	S	P	S	Y	A	W	V	K	C	E	W	E	.	.	E	D	K	D	C	Y	Q	T	F	Q	N	G	R	I
Template Known Secondary structure		T	T	S	T	T	S																					T	T	S	S	S								S					T	T	T	T								S								S	G	.	.	G	G		S								T	T
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.			.	.	.	.	.	.	.	.	380	.	.	.	.	.
		434	.	.	.	.					.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.		.	.	.	.	.	460	.	.	.
Predicted Secondary structure							.	.	.	.																	.
Query SS confidence							.	.	.	.																	.
Query Sequence		P	V	I	G	R	.	.	.	.	I	Y	D	G	R	L	W	L	D	L	R	C	L	E	D	E	.	Q	R	F	L	E	M	L	L	K
Query Conservation							.	.	.	.																	.
Alig confidence							.	.	.	.																	.
Template Conservation
Template Sequence		N	T	Q	N	G	V	G	F	E	A	S	S	R	Y	V	R	L	S	L	I	K	T	Q	D	D	F	D	Q	L	M	Y	Y	L	K	D
Template Known Secondary structure						G	G	G	G	T	S		T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions