231 d2hoxa1 Probab=99.69   E-value=1.4e-15  Score=108.52  Aligned_columns=295  Identities=10%

Q ss_pred             HHHHHHHHHHH--------CCCEEEEECCHHHHHHHHHHHHCCCCE---------EEECCCCCCCCCHHHHHHHHHHHCC
Q ss_conf             99999999983--------898799974917999999985058982---------9984874325322677888898619
Q batch____       132 RALAQLLCRIT--------GAEDACIVNNNAAAVLLMLAATASGKE---------VVVSRGELVEIGGAFRIPDVMRQAG  194 (463)
Q Consensus       132 ~~~~~~ia~l~--------g~e~a~v~~sg~~A~~lal~al~~~~e---------viv~~~~~~~~~~~~~~~~~~~~~G  194 (463)
                      .++++.|+++.        -....+++||+++++.++++++.++++         +++....+..+      .+.+...|
T Consensus       103 ~~L~~~i~~l~~~~g~~~~~~~~iv~t~G~~~~l~~a~~aL~~pGd~v~~~~p~~v~~~~p~y~~~------~~~~~~~~  176 (425)
T d2hoxa1         103 FELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVF------REQTKYFD  176 (425)
T ss_dssp             HHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHH------HHHHHHSC
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHH------HHHHHHCC
T ss_conf             899999999988508867887769994688999999999864888612356774357300237789------99998559


Q ss_pred             CEEEECCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf             86887589988898899985396870899974767566677775798999999998298799988620123345567655
Q batch____       195 CTLHEVGTTNRTHANDYRQAVNENTALLMKVHTSNYSIQGFTKAIDEAELVALGKELDVPVVTDLGSGSLVDLSQYGLPK  274 (463)
Q Consensus       195 ~~~~~v~~~~~~~~~~~~~ai~~~t~~i~~~~~~n~~~~~~~~~~~l~~l~~la~~~gi~li~D~~~~~~~~~~~~~~~~  274 (463)
                      .+...+.    .|.+.++.+++++|+++++.+|+||++....           |.+||+++|+|+++.......      
T Consensus       177 ~~~~~~~----~d~~~~~~~~~~~~~~~~i~~P~NPtG~v~~-----------a~~~~~~~i~De~y~~~~~~~------  235 (425)
T d2hoxa1         177 KKGYVWA----GNAANYVNVSNPEQYIEMVTSPNNPEGLLRH-----------AVIKGCKSIYDMVYYWPHYTP------  235 (425)
T ss_dssp             CTTEEEE----EEGGGGTTCSCGGGEEEEEESSCTTTCCCCC-----------CSSTTCEEEEECTTCSTTTSC------
T ss_pred             CCCCCCC----CCHHHHHHHCCCCCEEEEECCCCCCCCEEEE-----------EEECCCEEEEECCCCCCCCCC------
T ss_conf             9744424----7988999724888579998178888560654-----------232396899714323433233------


Q ss_pred             CCHHHHHHHCCCEEEEECCCCCCCCCEEEE-EEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf             310233554396199954776667870599-9738999988762666665657714788998777663593466669889
Q batch____       275 EPMPQELIAAGVSLVSFSGDKLLGGPQAGI-IVGKKEMIARLQSHPLKRALRADKMTLAALEATLRLYLHPEALSEKLPT  353 (463)
Q Consensus       275 ~~~~~~~~~~gadlv~~s~~k~~gg~~~g~-i~g~~~~i~~~~~~~~~~~~~~~~~~~~~l~~tl~~~~~~~~a~~~~~~  353 (463)
                         .....+.-+.+.+||+...+.|...|+ +++++++++++.+........++.....+....++.     ........
T Consensus       236 ---~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~~~i~~~l~~~~~~~~~~~s~~~Q~aA~~~L~~-----~~~~~~~~  307 (425)
T d2hoxa1         236 ---IKYKADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKE-----VVAMVKTQ  307 (425)
T ss_dssp             ---CCSCBCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHH-----HHHHHHHH
T ss_pred             ---CCCCCCCEEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC-----CHHHHHHH
T ss_conf             ---3345685499981551012332310189968989999999864105777368999999999602-----01345655


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCC
Q ss_conf             98767719999999999999986251311583562564323655210124562069998547887898999987413899
Q batch____       354 LRLLTRSAEVIQIQAQRLQAPLAAHYGAEFAVQVMPCLSQIGSGSLPVDRLPSAALTFTPHDGRGSHLESLAARWRELPV  433 (463)
Q Consensus       354 l~~L~~~~~~l~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~g~gs~p~~~l~~~~i~~~~~~~~~~~~~~~~~~Lr~~~~  433 (463)
                      ........+..++...+-.+.+.+.+.......+.................+.-..........  +.+.+...|+...+
T Consensus       308 ~~~~~~~~~~~r~~l~~r~~~l~~~L~~~~~~~l~~~p~~~~~~~~~~~~~~~~~f~w~~~~~~--~~~~~~~lL~e~GI  385 (425)
T d2hoxa1         308 KGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWE--EDKDCYQTFQNGRI  385 (425)
T ss_dssp             TTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECSG--GGCSHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC--CHHHHHHHHHHCCE
T ss_conf             5548999999999999999999999863576300345655432210013778761699867898--08999999996694


Q ss_pred             CEEEE----EECCEEEEECCCCCCH-HHHHHHHHC
Q ss_conf             78989----7298799807878808-999998719
Q batch____       434 PVIGR----IYDGRLWLDLRCLEDE-QRFLEMLLK  463 (463)
Q Consensus       434 pV~~r----i~~~~i~l~~rtl~d~-e~ii~~llk  463 (463)
                      -+...    ..++.+++.+.+-.|+ +++++.|-|
T Consensus       386 ~v~pGs~FG~~~~~vRiSl~~~~e~ld~~l~rL~~  420 (425)
T d2hoxa1         386 NTQNGVGFEASSRYVRLSLIKTQDDFDQLMYYLKD  420 (425)
T ss_dssp             ECEEGGGGTSCTTEEEEECSSCHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHH
T ss_conf             99717023898865999913998999999999999