Job Description P06864 Confidence 99.86% Date Thu Jan 5 10:59:27 GMT 2012 Rank 41 Aligned Residues 242 % Identity 19% Template c3civA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endo-beta-1,4-mannanase; PDBTitle: crystal structure of the endo-beta-1,4-mannanase from2 alicyclobacillus acidocaldarius Resolution 1.90 Å

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		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380																						.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	L	H	G	V	N	R	H	D	N	D	H	R	K	G	R	A	V	G	M	D	R	V	E	K	D	L	Q	L	M	K	Q	H	N	I	N	S	V	R	T	A	H	Y	P	N	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	R	F	Y	E	L	C	D	I	Y	G	L	F
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.
Template Sequence		F	I	R	G	M	T	F	G	F	V	G	Q	H	G	T	W	.	.	G	T	D	E	A	R	A	S	M	R	A	L	A	E	Q	P	F	N	W	V	T	L	A	F	A	G	L	M	E	H	P	G	D	P	A	I	A	Y	G	P	P	V	T	V	S	D	D	E	I	A	S	M	A	E	L	A	H	A	L	G	L	K
Template Known Secondary structure									S	T	T		B	T	T	G	G	.	.	G	S													S	S		S											S	S	T	T					B		S	T	T	T	B																T	T
Template Predicted Secondary structure																		.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450												.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	M	A	E	T	D	V	E	S	H	G	F	A	N	V	G	D	I	S	R	I	T	D	D	P	Q	W	E	K	V	Y	V	E	R	I	V	R	H	I	H	A	Q	K	N	H	P	S	I	I	I	W	S	L	G	N	E	S	.	.	.	.	.	.	.	.	.	.	.	G	Y	G	C	N	I	R	A	M	Y	H	A
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.																																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.
Template Sequence		V	C	L	K	P	T	V	N	C	R	D	G	T	W	R	G	E	I	R	.	F	E	K	E	H	G	P	D	L	E	S	W	E	A	W	F	G	S	Y	S	D	M	M	A	H	Y	A	H	V	A	K	R	T	G	C	E	M	F	C	V	G	C	E	M	T	T	A	E	P	H	E	A	M	W	R	E	T	I	A	R
Template Known Secondary structure											T	T				G	G	G			.		S	B	S			T	T	S	S	B																						T	T		S							S		T	T	T	T	T
Template Predicted Secondary structure																					.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		463	.	.	.	.	.	.	470	.	.	.							.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.		490	.	.	.	.	.	.	.	.	.	500	.							.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
Predicted Secondary structure													.	.	.	.	.	.																	.													.	.	.	.	.	.																							.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.																	.													.	.	.	.	.	.																							.	.	.	.	.	.
Query Sequence		A	K	A	L	D	D	T	R	L	V	H	.	.	.	.	.	.	Y	E	E	D	R	D	A	E	V	V	D	I	I	S	T	M	.	Y	T	R	V	P	L	M	N	E	F	G	E	.	.	.	.	.	.	Y	P	H	P	K	P	R	I	I	C	E	Y	A	H	A	M	G	N	G	P	G	G	.	.	.	.	.	.
Query Conservation													.	.	.	.	.	.																	.													.	.	.	.	.	.																							.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.																	.													.	.	.	.	.	.																							.	.	.	.	.	.
Template Conservation
Template Sequence		V	R	T	E	Y	D	G	L	V	T	Y	N	C	N	H	G	R	E	E	H	V	R	F	W	D	A	V	D	L	I	S	S	S	A	Y	Y	P	I	D	R	W	R	D	R	V	P	V	L	R	E	V	A	E	A	H	E	K	P	L	F	F	M	E	V	G	C	P	S	R	S	G	S	G	A	C	P	W	D	Y	R
Template Known Secondary structure								S								T	T		T	T	T		S		G	G	G	S	S										G	G	G																T												S	B	T	T	G	G	G	S	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
															524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	E	Y	Q	N	V	F	Y	K	H	D	C	I	Q	G	H	Y	V	W	E	W	C	D	H	G	I	Q	A	Q	D	D	H	G	N	V	W	Y	K	F	G	G	D	Y	G	D	Y	P	N	N	Y	N	F	C	L	D	G	L	I	Y	S	D	Q	T	P	G	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template Sequence		H	P	G	A	V	C	L	D	E	Q	A	R	F	Y	E	A	M	F	A	A	M	P	D	E	P	W	F	K	G	Y	M	L	W	E	W	P	W	K	L	Y	P	R	E	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	D	G	S	Y	C	I	Y	G	.	.	.	.	.	.	.	.	K	P
Template Known Secondary structure						B																S				T	T											S	S				G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G			S	S			T	T	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.																.	.	.	.	.	.	300	.	.	.									.	.
		591	.	.	.	.	.	.	.	.	600	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	K	E	Y	K	Q	V	I	A	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	D	V	V	A	R	A	F	S	A	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions