Email l.a.kelley@imperial.ac.uk Description Q46920 Date Thu Jan 5 12:35:53 GMT 2012 Unique Job ID da6b85928219f7a4

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3bp1A_ 100.0 64 PDB header:oxidoreductase Chain: A: PDB Molecule:nadph-dependent 7-cyano-7-deazaguanine reductase; PDBTitle: crystal structure of putative 7-cyano-7-deazaguanine2 reductase quef from vibrio cholerae o1 biovar eltor 2 c1wm9D_ 97.8 19 PDB header:hydrolase Chain: D: PDB Molecule:gtp cyclohydrolase i; PDBTitle: structure of gtp cyclohydrolase i from thermus thermophilus hb8 3 d1wura1 97.8 19 Fold:T-fold Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like Family:GTP cyclohydrolase I 4 c1is7F_ 95.5 20 PDB header:hydrolase/protein binding Chain: F: PDB Molecule:gtp cyclohydrolase i; PDBTitle: crystal structure of rat gtpchi/gfrp stimulatory complex 5 d1wpla_ 95.5 20 Fold:T-fold Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like Family:GTP cyclohydrolase I 6 d1a8ra_ 95.2 19 Fold:T-fold Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like Family:GTP cyclohydrolase I 7 c1rg9D_ 77.9 16 PDB header:transferase Chain: D: PDB Molecule:s-adenosylmethionine synthetase; PDBTitle: s-adenosylmethionine synthetase complexed with sam and ppnp 8 c3imlB_ 60.2 18 PDB header:transferase Chain: B: PDB Molecule:s-adenosylmethionine synthetase; PDBTitle: crystal structure of s-adenosylmethionine synthetase from burkholderia2 pseudomallei 9 c2obvA_ 52.0 16 PDB header:transferase Chain: A: PDB Molecule:s-adenosylmethionine synthetase isoform type-1; PDBTitle: crystal structure of the human s-adenosylmethionine synthetase 1 in2 complex with the product 10 c2f42A_ 49.5 19 PDB header:chaperone Chain: A: PDB Molecule:stip1 homology and u-box containing protein 1; PDBTitle: dimerization and u-box domains of zebrafish c-terminal of hsp702 interacting protein 11 c3hjhA_ 48.9 53 PDB header:hydrolase Chain: A: PDB Molecule:transcription-repair-coupling factor; PDBTitle: a rigid n-terminal clamp restrains the motor domains of the bacterial2 transcription-repair coupling factor 12 d3bz6a2 32.7 30 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:PSPTO2686-like 13 c3pg6D_ 32.6 25 PDB header:ligase Chain: D: PDB Molecule:e3 ubiquitin-protein ligase dtx3l; PDBTitle: the carboxyl terminal domain of human deltex 3-like 14 d2b2na1 31.1 54 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Tandem AAA-ATPase domain 15 d1j6ra_ 31.0 27 Fold:Methionine synthase activation domain-like Superfamily:Methionine synthase activation domain-like Family:Hypothetical protein TM0269 16 d2eyqa4 30.7 54 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Tandem AAA-ATPase domain 17 d2o4ta1 29.2 13 Fold:Left-handed superhelix Superfamily:BH3980-like Family:BH3980-like 18 c3gzfD_ 28.7 18 PDB header:viral protein Chain: D: PDB Molecule:replicase polyprotein 1ab; PDBTitle: structure of the c-terminal domain of nsp4 from feline coronavirus 19 c3rv2B_ 27.0 18 PDB header:transferase Chain: B: PDB Molecule:s-adenosylmethionine synthase; PDBTitle: crystal structure of s-adenosylmethionine synthetase from2 mycobacterium marinum 20 c3fpnB_ 26.2 31 PDB header:dna binding protein Chain: B: PDB Molecule:geobacillus stearothermophilus uvrb interaction PDBTitle: crystal structure of uvra-uvrb interaction domains 21 c3ty1B_ not modelled 19.7 16 PDB header:isomerase Chain: B: PDB Molecule:hypothetical aldose 1-epimerase; PDBTitle: crystal structure of a hypothetical aldose 1-epimerase (kpn_04629)2 from klebsiella pneumoniae subsp. pneumoniae mgh 78578 at 1.90 a3 resolution 22 d1nb9a_ not modelled 16.4 10 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin kinase-like Family:ATP-dependent riboflavin kinase-like 23 d2pvaa_ not modelled 15.6 18 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Penicillin V acylase 24 d1t5la1 not modelled 15.5 31 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Tandem AAA-ATPase domain 25 c2hezB_ not modelled 15.3 21 PDB header:hydrolase Chain: B: PDB Molecule:bile salt hydrolase; PDBTitle: bifidobacterium longum bile salt hydrolase 26 c3bz6A_ not modelled 15.1 30 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0502 protein pspto_2686; PDBTitle: crystal structure of a conserved protein of unknown function from2 pseudomonas syringae pv. tomato str. dc3000 27 c3op1A_ not modelled 14.5 21 PDB header:transferase Chain: A: PDB Molecule:macrolide-efflux protein; PDBTitle: crystal structure of macrolide-efflux protein sp_1110 from2 streptococcus pneumoniae 28 d1n08a_ not modelled 13.9 10 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin kinase-like Family:ATP-dependent riboflavin kinase-like 29 c3bnwA_ not modelled 12.9 16 PDB header:transferase Chain: A: PDB Molecule:riboflavin kinase, putative; PDBTitle: crystal structure of riboflavin kinase from trypanosoma brucei 30 d1tyja1 not modelled 12.6 25 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:Carbohydrate-binding domain Family:Cellulose-binding domain family III 31 d1zv9a1 not modelled 12.4 32 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:Carbohydrate-binding domain Family:Cellulose-binding domain family III 32 c3izcW_ not modelled 12.2 22 PDB header:ribosome Chain: W: PDB Molecule:60s ribosomal protein rpl22 (l22e); PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome 33 c2eyqA_ not modelled 11.8 54 PDB header:hydrolase Chain: A: PDB Molecule:transcription-repair coupling factor; PDBTitle: crystal structure of escherichia coli transcription-repair2 coupling factor 34 c2im9A_ not modelled 11.2 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of protein lpg0564 from legionella pneumophila str.2 philadelphia 1, pfam duf1460 35 d2im9a1 not modelled 11.2 19 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Lpg0564-like 36 c3h8mB_ not modelled 11.0 19 PDB header:transferase Chain: B: PDB Molecule:ephrin type-a receptor 7; PDBTitle: sam domain of human ephrin type-a receptor 7 (epha7) 37 c3lhiA_ not modelled 10.5 21 PDB header:hydrolase Chain: A: PDB Molecule:putative 6-phosphogluconolactonase; PDBTitle: crystal structure of putative 6-2 phosphogluconolactonase(yp_207848.1) from neisseria3 gonorrhoeae fa 1090 at 1.33 a resolution 38 c4a1dM_ not modelled 10.3 26 PDB header:ribosome Chain: M: PDB Molecule:ribosomal protein l22; PDBTitle: t.thermophila 60s ribosomal subunit in complex with initiation2 factor 6. this file contains 26s rrna and proteins of3 molecule 4. 39 c3kkaD_ not modelled 10.1 23 PDB header:transferase Chain: D: PDB Molecule:ephrin type-a receptor 2; PDBTitle: co-crystal structure of the sam domains of epha1 and epha2 40 c2b59A_ not modelled 9.7 44 PDB header:hydrolase/structural protein Chain: A: PDB Molecule:cog1196: chromosome segregation atpases; PDBTitle: the type ii cohesin dockerin complex 41 d2c2la2 not modelled 9.7 17 Fold:RING/U-box Superfamily:RING/U-box Family:U-box 42 d2bm3a1 not modelled 9.6 44 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:Carbohydrate-binding domain Family:Cellulose-binding domain family III 43 c2kreA_ not modelled 9.6 17 PDB header:protein binding Chain: A: PDB Molecule:ubiquitin conjugation factor e4 b; PDBTitle: solution structure of e4b/ufd2a u-box domain 44 c3o2kA_ not modelled 9.5 23 PDB header:transferase Chain: A: PDB Molecule:brevianamide f prenyltransferase; PDBTitle: crystal structure of brevianamide f prenyltransferase complexed with2 brevianamide f and dimethylallyl s-thiolodiphosphate 45 c2x0kB_ not modelled 9.4 11 PDB header:transferase Chain: B: PDB Molecule:riboflavin biosynthesis protein ribf; PDBTitle: crystal structure of modular fad synthetase from2 corynebacterium ammoniagenes 46 c1m0kA_ not modelled 9.3 50 PDB header:ion transport Chain: A: PDB Molecule:bacteriorhodopsin; PDBTitle: bacteriorhodopsin k intermediate at 1.43 a resolution 47 d1m0ka_ not modelled 9.3 50 Fold:Family A G protein-coupled receptor-like Superfamily:Family A G protein-coupled receptor-like Family:Bacteriorhodopsin-like 48 c3fnkA_ not modelled 9.2 56 PDB header:structural protein Chain: A: PDB Molecule:cellulosomal scaffoldin adaptor protein b; PDBTitle: crystal structure of the second type ii cohesin module from2 the cellulosomal adaptor scaa scaffoldin of acetivibrio3 cellulolyticus 49 c2y9xC_ not modelled 9.1 14 PDB header:oxidoreductase Chain: C: PDB Molecule:polyphenol oxidase; PDBTitle: crystal structure of ppo3, a tyrosinase from agaricus bisporus, in2 deoxy-form that contains additional unknown lectin-like subunit,3 with inhibitor tropolone 50 c2xfmA_ not modelled 8.6 33 PDB header:rna/protein Chain: A: PDB Molecule:piwi-like protein 1; PDBTitle: complex structure of the miwi paz domain bound to methylated single2 stranded rna 51 d1gwya_ not modelled 8.2 12 Fold:Cytolysin/lectin Superfamily:Cytolysin/lectin Family:Anemone pore-forming cytolysin 52 d2phcb2 not modelled 8.1 29 Fold:DCoH-like Superfamily:PH0987 N-terminal domain-like Family:PH0987 N-terminal domain-like 53 d1iyca_ not modelled 8.0 50 Fold:Invertebrate chitin-binding proteins Superfamily:Invertebrate chitin-binding proteins Family:Antifungal peptide scarabaecin 54 c3ghpA_ not modelled 7.9 56 PDB header:structural protein Chain: A: PDB Molecule:cellulosomal scaffoldin adaptor protein b; PDBTitle: structure of the second type ii cohesin module from the2 adaptor scaa scaffoldin of acetivibrio cellulolyticus3 (including long c-terminal linker) 55 d1v2ya_ not modelled 7.8 25 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 56 c3i4zA_ not modelled 7.6 23 PDB header:transferase Chain: A: PDB Molecule:tryptophan dimethylallyltransferase; PDBTitle: crystal structure of the dimethylallyl tryptophan synthase fgapt2 from2 aspergillus fumigatus 57 d2cqpa1 not modelled 7.6 9 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 58 c1t6zB_ not modelled 7.6 14 PDB header:transferase Chain: B: PDB Molecule:riboflavin kinase/fmn adenylyltransferase; PDBTitle: crystal structure of riboflavin bound tm379 59 c2quoA_ not modelled 7.4 29 PDB header:toxin Chain: A: PDB Molecule:heat-labile enterotoxin b chain; PDBTitle: crystal structure of c terminal fragment of clostridium2 perfringens enterotoxin 60 c3htkC_ not modelled 7.3 17 PDB header:recombination/replication/ligase Chain: C: PDB Molecule:e3 sumo-protein ligase mms21; PDBTitle: crystal structure of mms21 and smc5 complex 61 d1p42a1 not modelled 6.9 10 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC 62 c3dclC_ not modelled 6.8 10 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:tm1086; PDBTitle: crystal structure of tm1086 63 d2gpia1 not modelled 6.8 27 Fold:Shew3726-like Superfamily:Shew3726-like Family:Shew3726-like 64 c2dbhA_ not modelled 6.6 56 PDB header:signaling protein Chain: A: PDB Molecule:tumor necrosis factor receptor superfamily PDBTitle: solution structure of the carboxyl-terminal card-like2 domain in human tnfr-related death receptor-6 65 d1mxaa2 not modelled 6.5 33 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 66 d2hiya1 not modelled 6.4 20 Fold:SP0830-like Superfamily:SP0830-like Family:SP0830-like 67 c1zc1A_ not modelled 6.1 21 PDB header:protein turnover Chain: A: PDB Molecule:ubiquitin fusion degradation protein 1; PDBTitle: ufd1 exhibits the aaa-atpase fold with two distinct2 ubiquitin interaction sites 68 d2d9ra1 not modelled 5.9 25 Fold:Double-split beta-barrel Superfamily:AF2212/PG0164-like Family:PG0164-like 69 d1ogya1 not modelled 5.8 25 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 70 d1c8sa_ not modelled 5.8 50 Fold:Family A G protein-coupled receptor-like Superfamily:Family A G protein-coupled receptor-like Family:Bacteriorhodopsin-like 71 c3vcbB_ not modelled 5.8 16 PDB header:viral protein Chain: B: PDB Molecule:rna-directed rna polymerase; PDBTitle: c425s mutant of the c-terminal cytoplasmic domain of non-structural2 protein 4 from mouse hepatitis virus a59 72 d2baya1 not modelled 5.8 40 Fold:RING/U-box Superfamily:RING/U-box Family:U-box 73 d2p02a2 not modelled 5.6 40 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 74 c1zbe1_ not modelled 5.4 23 PDB header:virus Chain: 1: PDB Molecule:coat protein vp1; PDBTitle: foot-and mouth disease virus serotype a1061 75 d2dira1 not modelled 5.4 15 Fold:THUMP domain Superfamily:THUMP domain-like Family:Minimal THUMP 76 d1x6ma_ not modelled 5.3 25 Fold:Mss4-like Superfamily:Mss4-like Family:Glutathione-dependent formaldehyde-activating enzyme, Gfa 77 d1usua_ not modelled 5.2 21 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Hsp90 middle domain 78 c2hz7A_ not modelled 5.2 17 PDB header:ligase Chain: A: PDB Molecule:glutaminyl-trna synthetase; PDBTitle: crystal structure of the glutaminyl-trna synthetase from2 deinococcus radiodurans 79 d1qm4a2 not modelled 5.1 40 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase