Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	G	D	S	I	L	S	Q	A	E	I	D	A	L	L	N	G	D	S	E	V	K	D	E	P	T	A	S	V	S	G	E	S	D	I	R	P	Y	D	P	N	T	Q	R	R	V	V	R	E	R	L	Q	A	L	E	I	I	N	E	R
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?									?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?								?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		F	A	R	H	F	R	M	G	L	F	N	L	L	R	R	S	P	D	I	T	V	G	A	I	R	I	Q	P	Y	H	E	F	A	R	N	L	P	V	P	T	N	L	N	L	I	H	L	K	P	L	R	G	T	G	L	V	V	F	S	P
Secondary structure
SS confidence
Disorder														?	?								?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		S	L	V	F	I	A	V	D	N	L	F	G	G	D	G	R	F	P	T	K	V	E	G	R	E	F	T	H	T	E	Q	R	V	I	N	R	M	L	K	L	A	L	E	G	Y	S	D	A	W	K	A	I	N	P	L	E	V	E	Y	V
Secondary structure
SS confidence
Disorder																	?	?	?	?	?	?	?	?	?	?																								?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		R	S	E	M	Q	V	K	F	T	N	I	T	T	S	P	N	D	I	V	V	N	T	P	F	H	V	E	I	G	N	L	T	G	E	F	N	I	C	L	P	F	S	M	I	E	P	L	R	E	L	L	V	N	P	P	L	E	N	S	R
Secondary structure
SS confidence
Disorder			?								?	?	?																																							?	?	?	?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Sequence		N	E	D	Q	N	W	R	D	N	L	V	R	Q	V	Q	H	S	Q	L	E	L	V	A	N	F	A	D	I	S	L	R	L	S	Q	I	L	K	L	N	P	G	D	V	L	P	I	E	K	P	D	R	I	I	A	H	V	D	G	V	P
Secondary structure
SS confidence
Disorder		?	?	?	?	?																					?	?	?	?								?			?
Disorder confidence
		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Sequence		V	L	T	S	Q	Y	G	T	L	N	G	Q	Y	A	L	R	I	E	H	L	I	N	P	I	L	N	S	L	N	E	E	Q	P	K
Secondary structure
SS confidence
Disorder																								?	?	?	?	?	?	?	?	?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 2hp7 chain A Region: 43 - 230 Aligned: 179 Modelled: 188 Confidence: 100.0% Identity: 26% PDB header:signaling protein Chain: A: PDB Molecule:flagellar motor switch protein flim; PDBTitle: structure of flim provides insight into assembly of the2 switch complex in the bacterial flagella motor Phyre2 PDB 1o6a chain A Region: 251 - 330 Aligned: 80 Modelled: 80 Confidence: 99.7% Identity: 18% Fold: Surface presentation of antigens (SPOA) Superfamily: Surface presentation of antigens (SPOA) Family: Surface presentation of antigens (SPOA) Phyre2 PDB 1xkr chain A Region: 45 - 231 Aligned: 182 Modelled: 187 Confidence: 99.6% Identity: 12% Fold: CheC-like Superfamily: CheC-like Family: CheC-like Phyre2 PDB 3qta chain A Region: 41 - 239 Aligned: 192 Modelled: 197 Confidence: 99.6% Identity: 10% PDB header:attractant Chain: A: PDB Molecule:chemotaxis protein chec; PDBTitle: crystal structure of a hypothetical chec-like protein (rrnac0528) from2 haloarcula marismortui atcc 43049 at 2.00 a resolution Phyre2 PDB 1o9y chain A Region: 253 - 321 Aligned: 69 Modelled: 69 Confidence: 99.6% Identity: 19% Fold: Surface presentation of antigens (SPOA) Superfamily: Surface presentation of antigens (SPOA) Family: Surface presentation of antigens (SPOA) Phyre2 PDB 1xko chain A Region: 55 - 219 Aligned: 145 Modelled: 165 Confidence: 97.7% Identity: 11% Fold: CheC-like Superfamily: CheC-like Family: CheC-like Phyre2 PDB 3hzh chain B Region: 59 - 219 Aligned: 145 Modelled: 161 Confidence: 97.6% Identity: 11% PDB header:signaling protein Chain: B: PDB Molecule:chemotaxis operon protein (chex); PDBTitle: crystal structure of the chex-chey-bef3-mg+2 complex from2 borrelia burgdorferi Phyre2 PDB 3hm4 chain A Region: 57 - 217 Aligned: 145 Modelled: 153 Confidence: 97.5% Identity: 14% PDB header:hydrolase Chain: A: PDB Molecule:chemotaxis protein chex; PDBTitle: crystal structure of a chemotaxis protein chex (dde_0281) from2 desulfovibrio desulfuricans subsp. at 1.30 a resolution Phyre2 PDB 3h2d chain A Region: 56 - 217 Aligned: 146 Modelled: 155 Confidence: 96.1% Identity: 14% PDB header:signaling protein Chain: A: PDB Molecule:chec-like superfamily protein; PDBTitle: crystal structure of a chemotactic chec-like protein (so_3915) from2 shewanella oneidensis mr-1 at 1.86 a resolution Phyre2 PDB 1bu3 chain A Region: 1 - 54 Aligned: 53 Modelled: 54 Confidence: 58.0% Identity: 15% Fold: EF Hand-like Superfamily: EF-hand Family: Parvalbumin Phyre2 PDB 2w85 chain A Region: 6 - 24 Aligned: 19 Modelled: 19 Confidence: 46.1% Identity: 32% PDB header:protein transport Chain: A: PDB Molecule:peroxisomal membrane anchor protein pex14; PDBTitle: structure of pex14 in compex with pex19 Phyre2 PDB 3fs7 chain D Region: 1 - 54 Aligned: 53 Modelled: 54 Confidence: 39.3% Identity: 21% PDB header:metal binding protein Chain: D: PDB Molecule:parvalbumin, thymic; PDBTitle: crystal structure of gallus gallus beta-parvalbumin (avian2 thymic hormone) Phyre2 PDB 2evr chain A domain 2 Region: 277 - 326 Aligned: 49 Modelled: 50 Confidence: 37.0% Identity: 16% Fold: Cysteine proteinases Superfamily: Cysteine proteinases Family: NlpC/P60 Phyre2 PDB 2pl9 chain D Region: 5 - 19 Aligned: 15 Modelled: 15 Confidence: 28.3% Identity: 33% PDB header:signaling protien Chain: D: PDB Molecule:chemotaxis protein chez; PDBTitle: crystal structure of chey-mg(2+)-bef(3)(-) in complex with chez(c19)2 peptide solved from a p2(1)2(1)2 crystal Phyre2 PDB 2pl9 chain E Region: 7 - 19 Aligned: 13 Modelled: 13 Confidence: 27.9% Identity: 38% PDB header:signaling protien Chain: E: PDB Molecule:chemotaxis protein chez; PDBTitle: crystal structure of chey-mg(2+)-bef(3)(-) in complex with chez(c19)2 peptide solved from a p2(1)2(1)2 crystal Phyre2 PDB 2pl9 chain F Region: 7 - 19 Aligned: 13 Modelled: 13 Confidence: 27.9% Identity: 38% PDB header:signaling protien Chain: F: PDB Molecule:chemotaxis protein chez; PDBTitle: crystal structure of chey-mg(2+)-bef(3)(-) in complex with chez(c19)2 peptide solved from a p2(1)2(1)2 crystal Phyre2 PDB 2fg0 chain B Region: 277 - 326 Aligned: 49 Modelled: 50 Confidence: 24.0% Identity: 16% PDB header:hydrolase Chain: B: PDB Molecule:cog0791: cell wall-associated hydrolases (invasion- PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (npun_r0659) from nostoc punctiforme pcc 73102 at 1.793 a resolution Phyre2 PDB 2isb chain A domain 1 Region: 267 - 287 Aligned: 21 Modelled: 21 Confidence: 23.7% Identity: 48% Fold: The "swivelling" beta/beta/alpha domain Superfamily: FumA C-terminal domain-like Family: FumA C-terminal domain-like Phyre2 PDB 2jij chain A Region: 3 - 16 Aligned: 14 Modelled: 14 Confidence: 18.3% Identity: 29% PDB header:hydrolase Chain: A: PDB Molecule:prolyl-4 hydroxylase; PDBTitle: crystal structure of the apo form of chlamydomonas2 reinhardtii prolyl-4 hydroxylase type i Phyre2 PDB 2kyc chain A Region: 1 - 54 Aligned: 53 Modelled: 53 Confidence: 17.2% Identity: 25% PDB header:calcium binding protein Chain: A: PDB Molecule:parvalbumin, thymic cpv3; PDBTitle: solution structure of ca-free chicken parvalbumin 3 (cpv3) Phyre2 1 c2hp7A_ 2 d1o6aa_ 3 d1xkra_ 4 c3qtaA_ 5 d1o9ya_ 6 d1xkoa_ 7 c3hzhB_ 8 c3hm4A_ 9 c3h2dA_ 10 d1bu3a_ 11 c2w85A_ 12 c3fs7D_ 13 d2evra2 14 c2pl9D_ 15 c2pl9E_ 16 c2pl9F_ 17 c2fg0B_ 18 d2isba1 19 c2jijA_ 20 c2kycA_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2hp7A_ 100.0 26 PDB header:signaling protein Chain: A: PDB Molecule:flagellar motor switch protein flim; PDBTitle: structure of flim provides insight into assembly of the2 switch complex in the bacterial flagella motor 2 d1o6aa_ 99.7 18 Fold:Surface presentation of antigens (SPOA) Superfamily:Surface presentation of antigens (SPOA) Family:Surface presentation of antigens (SPOA) 3 d1xkra_ 99.6 12 Fold:CheC-like Superfamily:CheC-like Family:CheC-like 4 c3qtaA_ 99.6 10 PDB header:attractant Chain: A: PDB Molecule:chemotaxis protein chec; PDBTitle: crystal structure of a hypothetical chec-like protein (rrnac0528) from2 haloarcula marismortui atcc 43049 at 2.00 a resolution 5 d1o9ya_ 99.6 19 Fold:Surface presentation of antigens (SPOA) Superfamily:Surface presentation of antigens (SPOA) Family:Surface presentation of antigens (SPOA) 6 d1xkoa_ 97.7 11 Fold:CheC-like Superfamily:CheC-like Family:CheC-like 7 c3hzhB_ 97.6 11 PDB header:signaling protein Chain: B: PDB Molecule:chemotaxis operon protein (chex); PDBTitle: crystal structure of the chex-chey-bef3-mg+2 complex from2 borrelia burgdorferi 8 c3hm4A_ 97.5 14 PDB header:hydrolase Chain: A: PDB Molecule:chemotaxis protein chex; PDBTitle: crystal structure of a chemotaxis protein chex (dde_0281) from2 desulfovibrio desulfuricans subsp. at 1.30 a resolution 9 c3h2dA_ 96.1 14 PDB header:signaling protein Chain: A: PDB Molecule:chec-like superfamily protein; PDBTitle: crystal structure of a chemotactic chec-like protein (so_3915) from2 shewanella oneidensis mr-1 at 1.86 a resolution 10 d1bu3a_ 58.0 15 Fold:EF Hand-like Superfamily:EF-hand Family:Parvalbumin 11 c2w85A_ 46.1 32 PDB header:protein transport Chain: A: PDB Molecule:peroxisomal membrane anchor protein pex14; PDBTitle: structure of pex14 in compex with pex19 12 c3fs7D_ 39.3 21 PDB header:metal binding protein Chain: D: PDB Molecule:parvalbumin, thymic; PDBTitle: crystal structure of gallus gallus beta-parvalbumin (avian2 thymic hormone) 13 d2evra2 37.0 16 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:NlpC/P60 14 c2pl9D_ 28.3 33 PDB header:signaling protien Chain: D: PDB Molecule:chemotaxis protein chez; PDBTitle: crystal structure of chey-mg(2+)-bef(3)(-) in complex with chez(c19)2 peptide solved from a p2(1)2(1)2 crystal 15 c2pl9E_ 27.9 38 PDB header:signaling protien Chain: E: PDB Molecule:chemotaxis protein chez; PDBTitle: crystal structure of chey-mg(2+)-bef(3)(-) in complex with chez(c19)2 peptide solved from a p2(1)2(1)2 crystal 16 c2pl9F_ 27.9 38 PDB header:signaling protien Chain: F: PDB Molecule:chemotaxis protein chez; PDBTitle: crystal structure of chey-mg(2+)-bef(3)(-) in complex with chez(c19)2 peptide solved from a p2(1)2(1)2 crystal 17 c2fg0B_ 24.0 16 PDB header:hydrolase Chain: B: PDB Molecule:cog0791: cell wall-associated hydrolases (invasion- PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (npun_r0659) from nostoc punctiforme pcc 73102 at 1.793 a resolution 18 d2isba1 23.7 48 Fold:The "swivelling" beta/beta/alpha domain Superfamily:FumA C-terminal domain-like Family:FumA C-terminal domain-like 19 c2jijA_ 18.3 29 PDB header:hydrolase Chain: A: PDB Molecule:prolyl-4 hydroxylase; PDBTitle: crystal structure of the apo form of chlamydomonas2 reinhardtii prolyl-4 hydroxylase type i 20 c2kycA_ 17.2 25 PDB header:calcium binding protein Chain: A: PDB Molecule:parvalbumin, thymic cpv3; PDBTitle: solution structure of ca-free chicken parvalbumin 3 (cpv3) 21 c3jstA_ not modelled 14.8 20 PDB header:lyase Chain: A: PDB Molecule:putative pterin-4-alpha-carbinolamine dehydratase; PDBTitle: crystal structure of transcriptional coactivator/pterin dehydratase2 from brucella melitensis 22 d1rwya_ not modelled 14.5 15 Fold:EF Hand-like Superfamily:EF-hand Family:Parvalbumin 23 d1a0pa2 not modelled 13.9 33 Fold:DNA breaking-rejoining enzymes Superfamily:DNA breaking-rejoining enzymes Family:Lambda integrase-like, catalytic core 24 c3ff5B_ not modelled 13.4 36 PDB header:protein transport Chain: B: PDB Molecule:peroxisomal biogenesis factor 14; PDBTitle: crystal structure of the conserved n-terminal domain of the2 peroxisomal matrix-protein-import receptor, pex14p 25 c2vywA_ not modelled 13.2 38 PDB header:oxygen binding Chain: A: PDB Molecule:hemoglobin; PDBTitle: hemoglobin (hb2) from trematode fasciola hepatica 26 c2e63A_ not modelled 13.0 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:kiaa1787 protein; PDBTitle: solution structure of the neuz domain in kiaa1787 protein 27 d1vyua1 not modelled 12.6 21 Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain 28 d1pvaa_ not modelled 11.9 16 Fold:EF Hand-like Superfamily:EF-hand Family:Parvalbumin 29 c2f9jP_ not modelled 11.8 50 PDB header:rna binding protein Chain: P: PDB Molecule:splicing factor 3b subunit 1; PDBTitle: 3.0 angstrom resolution structure of a y22m mutant of the spliceosomal2 protein p14 bound to a region of sf3b155 30 d1d1na_ not modelled 11.8 25 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Translation proteins Family:Elongation factors 31 c3nkhB_ not modelled 11.0 18 PDB header:recombination Chain: B: PDB Molecule:integrase; PDBTitle: crystal structure of integrase from mrsa strain staphylococcus aureus 32 c2glwA_ not modelled 10.6 27 PDB header:transcription Chain: A: PDB Molecule:92aa long hypothetical protein; PDBTitle: the solution structure of phs018 from pyrococcus horikoshii 33 d2cqaa1 not modelled 10.5 33 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:TIP49 domain 34 c3peiA_ not modelled 9.9 21 PDB header:hydrolase Chain: A: PDB Molecule:cytosol aminopeptidase; PDBTitle: crystal structure of cytosol aminopeptidase from francisella2 tularensis 35 d1wpga1 not modelled 9.7 24 Fold:Double-stranded beta-helix Superfamily:Calcium ATPase, transduction domain A Family:Calcium ATPase, transduction domain A 36 d5pala_ not modelled 9.6 16 Fold:EF Hand-like Superfamily:EF-hand Family:Parvalbumin 37 d1khda1 not modelled 9.4 18 Fold:Methionine synthase domain-like Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 38 c2uzhB_ not modelled 9.0 25 PDB header:lyase Chain: B: PDB Molecule:2c-methyl-d-erythritol 2,4-cyclodiphosphate PDBTitle: mycobacterium smegmatis 2c-methyl-d-erythritol-2,4-2 cyclodiphosphate synthase (ispf) 39 d1jz8a3 not modelled 8.8 14 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:beta-Galactosidase/glucuronidase, N-terminal domain 40 d1s04a_ not modelled 8.7 21 Fold:PUA domain-like Superfamily:PUA domain-like Family:ProFAR isomerase associated domain 41 c3fkhB_ not modelled 8.5 29 PDB header:oxidoreductase Chain: B: PDB Molecule:putative pyridoxamine 5'-phosphate oxidase; PDBTitle: crystal structure of putative pyridoxamine 5'-phosphate oxidase2 (np_601736.1) from corynebacterium glutamicum atcc 13032 kitasato at3 2.51 a resolution 42 c2pmzV_ not modelled 8.5 10 PDB header:translation, transferase Chain: V: PDB Molecule:dna-directed rna polymerase subunit h; PDBTitle: archaeal rna polymerase from sulfolobus solfataricus 43 d2elca1 not modelled 8.2 13 Fold:Methionine synthase domain-like Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 44 c3q4nA_ not modelled 8.1 30 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein mj0754; PDBTitle: crystal structure of hypothetical protein mj0754 from methanococcus2 jannaschii dsm 2661 45 c2kx2A_ not modelled 8.0 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: the solution structure of mth1821 46 d1nr9a_ not modelled 8.0 33 Fold:FAH Superfamily:FAH Family:FAH 47 c1i7oC_ not modelled 7.9 35 PDB header:isomerase, lyase Chain: C: PDB Molecule:4-hydroxyphenylacetate degradation bifunctional PDBTitle: crystal structure of hpce 48 c3ouiA_ not modelled 7.8 11 PDB header:oxidoreductase Chain: A: PDB Molecule:egl nine homolog 1; PDBTitle: phd2-r717 with 40787422 49 c2krgA_ not modelled 7.4 36 PDB header:signaling protein Chain: A: PDB Molecule:na(+)/h(+) exchange regulatory cofactor nhe-rf1; PDBTitle: solution structure of human sodium/ hydrogen exchange2 regulatory factor 1(150-358) 50 c2dfuB_ not modelled 7.2 32 PDB header:isomerase Chain: B: PDB Molecule:probable 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; PDBTitle: crystal structure of the 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase2 from thermus thermophilus hb8 51 d1eika_ not modelled 7.0 10 Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5 52 c2ebbA_ not modelled 7.0 33 PDB header:lyase Chain: A: PDB Molecule:pterin-4-alpha-carbinolamine dehydratase; PDBTitle: crystal structure of pterin-4-alpha-carbinolamine2 dehydratase (pterin carbinolamine dehydratase) from3 geobacillus kaustophilus hta426 53 c3itqB_ not modelled 7.0 36 PDB header:oxidoreductase Chain: B: PDB Molecule:prolyl 4-hydroxylase, alpha subunit domain protein; PDBTitle: crystal structure of a prolyl 4-hydroxylase from bacillus anthracis 54 c2hc8A_ not modelled 6.7 17 PDB header:transport protein Chain: A: PDB Molecule:cation-transporting atpase, p-type; PDBTitle: structure of the a. fulgidus copa a-domain 55 c3cp3A_ not modelled 6.7 24 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of conserved protein of unknown function dip18742 from corynebacterium diphtheriae 56 d1jjcb4 not modelled 6.7 14 Fold:Ferredoxin-like Superfamily:Anticodon-binding domain of PheRS Family:Anticodon-binding domain of PheRS 57 d1dzfa2 not modelled 6.6 13 Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5 58 c2oxgE_ not modelled 6.6 20 PDB header:transport protein Chain: E: PDB Molecule:soxz protein; PDBTitle: the soxyz complex of paracoccus pantotrophus 59 d1hmja_ not modelled 6.5 19 Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5 60 c3rfuC_ not modelled 6.4 13 PDB header:hydrolase, membrane protein Chain: C: PDB Molecule:copper efflux atpase; PDBTitle: crystal structure of a copper-transporting pib-type atpase 61 d1u5la_ not modelled 6.4 19 Fold:Prion-like Superfamily:Prion-like Family:Prion-like 62 d1b10a_ not modelled 6.1 25 Fold:Prion-like Superfamily:Prion-like Family:Prion-like 63 d1yq2a3 not modelled 6.0 16 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:beta-Galactosidase/glucuronidase, N-terminal domain 64 d1v8ga1 not modelled 5.9 14 Fold:Methionine synthase domain-like Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 65 d1v8ha1 not modelled 5.8 17 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:SoxZ-like 66 d1tqba_ not modelled 5.8 25 Fold:Prion-like Superfamily:Prion-like Family:Prion-like 67 d1dcpa_ not modelled 5.8 19 Fold:DCoH-like Superfamily:PCD-like Family:PCD-like 68 d1uw3a_ not modelled 5.7 25 Fold:Prion-like Superfamily:Prion-like Family:Prion-like 69 d1u69a_ not modelled 5.7 40 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:3-demethylubiquinone-9 3-methyltransferase 70 d1xyua_ not modelled 5.7 25 Fold:Prion-like Superfamily:Prion-like Family:Prion-like 71 d1xyka_ not modelled 5.5 25 Fold:Prion-like Superfamily:Prion-like Family:Prion-like 72 d1sawa_ not modelled 5.5 32 Fold:FAH Superfamily:FAH Family:FAH 73 c2zjtB_ not modelled 5.4 21 PDB header:isomerase Chain: B: PDB Molecule:dna gyrase subunit b; PDBTitle: crystal structure of dna gyrase b' domain sheds lights on2 the mechanism for t-segment navigation 74 d2vbua1 not modelled 5.3 32 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin kinase-like Family:CTP-dependent riboflavin kinase-like 75 d1vgga_ not modelled 5.3 17 Fold:Ta1353-like Superfamily:Ta1353-like Family:Ta1353-like 76 d1ibxa_ not modelled 5.2 21 Fold:beta-Grasp (ubiquitin-like) Superfamily:CAD & PB1 domains Family:CAD domain 77 c2gl0A_ not modelled 5.1 21 PDB header:transferase Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: structure of pae2307 in complex with adenosine 78 d1b8la_ not modelled 5.1 26 Fold:EF Hand-like Superfamily:EF-hand Family:Parvalbumin 79 d1uoua1 not modelled 5.1 17 Fold:Methionine synthase domain-like Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 80 d1ru0a_ not modelled 5.0 15 Fold:DCoH-like Superfamily:PCD-like Family:PCD-like 81 d1xnea_ not modelled 5.0 29 Fold:PUA domain-like Superfamily:PUA domain-like Family:ProFAR isomerase associated domain 82 d2tpta1 not modelled 5.0 25 Fold:Methionine synthase domain-like Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0