Return to main results Retrieve Phyre Job Id

Job DescriptionP0A959
Confidence100.00%DateThu Jan 5 11:09:27 GMT 2012
Rank79Aligned Residues330
% Identity16%Templated2hoxa1
SCOP infoPLP-dependent transferase-like PLP-dependent transferases AAT-like
Resolution1.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.. .......70. ........80.........90.........100...
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Query Sequence  GNKVLKLNIGNPAPFGFDAPDEILVDVIRNL. . . . . . PTAQGYCDS. . KGLYSARKAIMQHYQARGMRDVTVEDIYIGNG
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Template Sequence  QGCSADVASGDGL. . . FLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVG
Template Known Secondary structure  TT



S


G...GGTTS




TTTT
SSS
SS

TT

T
B

TT
S
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   55....60....... ..70.........80.........90.........100.........110.........120.........130.
 
   104.....110.........120. ........130.........140.........150.........160.........170.....
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Query Sequence  VSELIVQAMQALLNSGDE. . . . . . . . MLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDDIRAKITPRTRGIVII
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Template Sequence  VTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVWAGNAAN. . . . . . . . YVNVSNPEQYIEMVT
Template Known Secondary structure  S

TTT
TTS


SS

S

TTGGG........GTT
S
GGG
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   132.......140.........150.........160.........170.........180........ .190.........200...
 
   176...180.........190.........200.........210.........220.........230.........240.........250.....
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Query Sequence  NPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDAEHHSIAPLAPDLLTITFNGLSKTYRVAGFRQGWMVLN
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Template Sequence  SPNNPEGLLRH. . . . . . . . . . AVIKGCKSIYDMVYYWPHYTPIKYKA. . . . . . . DEDILLFTMSKFTGHSGSRFGWALIK
Template Known Secondary structure  SS
TTT




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SSTT

TT
STTTS


S
B.......

STS
GGG


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   204.....210.... .....220.........230.........240 .........250.........260......
 
   256...260.........270.........280.........290.. .......300.........310.........320..
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Query Sequence  . GPKKHAKGYIEGLEMLASMRLCANVPAQHAIQTALGG. . . . . . . . . YQSISEFITPGGRLYEQRNRAWELINDIPG. . .
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Template Sequence  DESVYNNLLNYMT. . . . . KNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSY
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TTSTTSTTSSS
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   267..270......... 280.........290.........300.........310.........320.........330.........340.
 
   323......330.........340.........350.........360.........370.........380.........390.
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Query Sequence  . . . . . . . . . . . VSCVKPRGALYMFPKIDAKRFNIHDDQKMVLDFLLQEKVLLVQGTAFNWPWPDHFRIVTLPRVDDIELS
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Template Sequence  QELPQSEYCNYFRRMRPPSPSYAWVKCEW. . . . . . EEDKDCYQTFQNGRINTQNGVGFE. ASSRYVRLSLIKTQDDFDQL
Template Known Secondary structure 



S
TTTT



S
S......GGG
STT
GGGGT.S
TT
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   342.......350.........360.........370 .........380.........390.... .....400.........410....
 
   392.......400.
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Query Sequence  LSKFARFLSG
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Template Sequence  MYYLKDMVKA
Template Known Secondary structure  T
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   415....420....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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