Job Description P52062 Confidence 68.70% Date Thu Jan 5 12:05:07 GMT 2012 Rank 223 Aligned Residues 145 % Identity 16% Template c1vliA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:spore coat polysaccharide biosynthesis protein spse; PDBTitle: crystal structure of spore coat polysaccharide biosynthesis protein2 spse (bsu37870) from bacillus subtilis at 2.38 a resolution Resolution 2.38 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																																						.																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.																		.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	G	P	A	M	Q	T	L	L	D	G	V	R	A	R	L	P	L	A	A	D	A	E	I	T	M	E	A	N	P	G	T	V	E	A	D	R	F	V	D	Y	Q	R	A	G	V	N	R	I	S	I	.	G	V	Q	S	F	S	E	E	K	L	K	R	L	G	R	I	H	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																						.																		.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.																													.																		.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.
Template Sequence		X	P	A	E	W	I	L	P	L	L	D	Y	C	R	E	.	.	.	.	.	.	.	.	.	K	Q	V	I	F	L	S	T	V	C	D	E	G	S	A	D	L	L	Q	S	T	S	P	S	A	F	K	I	A	S	Y	E	I	N	H	L	P	L	L	K	Y	V	A	R	L	N	R	P	X	I	F	S	T	A	G	A
Template Known Secondary structure		S		G	G	G											.	.	.	.	.	.	.	.	.	T	T						B			S									T	T			S						G	G	G	T	T										T	T		S							T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100										.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																												.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Query Sequence		G	P	Q	E	A	K	R	A	A	K	L	A	S	G	L	G	L	R	S	F	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	M	H	G	L	P	D	Q	S	L	E	E	A	L	G	D	L	R	Q	A	I	E	L	N	P	P	.	.	.	.
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.								.	.	.	.
Template Conservation																																																																						.
Template Sequence		E	I	S	D	V	H	E	A	W	R	T	I	R	A	E	G	N	N	Q	I	A	I	X	H	C	V	A	K	Y	P	A	P	P	E	Y	S	N	L	S	V	I	P	X	L	A	A	A	F	P	E	A	V	I	G	F	S	D	H	S	E	H	P	T	E	A	P	C	A	.	A	V	R	L	G	A	K	L	I	E	K
Template Known Secondary structure															T	T	T											S	S	S	S			G	G	G			T	T									S	T	T	S									S	S	S	S						.				T	T		S
Template Predicted Secondary structure																																																																						.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	S	W	Y	Q	L	T	I	E	P	N	T	L	F	G	S	R	P	P	V	L	P	D	D	D	A	L	W	D	I	F	E	Q	G	H	Q	L	L	T	A	A	G
Query Conservation
Alig confidence																	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.
Template Sequence		H	F	T	I	D	K	N	L	P	G	A	D	H	S	F	.	.	.	.	.	.	A	L	N	P	D	E	L	K	E	X	V	D	G	I	R	K	T	E	A	E	L	K
Template Known Secondary structure			B		S		T	T	S	S		S	S		T	T	.	.	.	.	.	.	S	B
Template Predicted Secondary structure																	.	.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250							.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions