223 c1vliA_ Probab=68.70   E-value=8.2  Score=18.09  Aligned_columns=145  Identities=16%

Q ss_pred             CCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHCCCC----------
Q ss_conf             8989999999999985798650464200576788999999998579742346-64347978998728898----------
Q batch____        72 LSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISI-GVQSFSEEKLKRLGRIH----------  140 (378)
Q Consensus        72 l~~~~l~~l~~~i~~~~~~~~~~~~~~e~~~~~l~~~~l~~l~~~G~~~isi-Gvqs~~~~~l~~i~r~~----------  140 (378)
                      ++.+++.+|.+..++         ..+..-..-.+.+.++.+.+.|+..+.+ +-+-.+-.+|+.+.+..          
T Consensus        76 l~~e~~~~L~~~~~~---------~Gi~f~sTpfd~~svd~l~~~~v~~~KIaS~el~n~pLL~~~A~~gkPvilSTGma  146 (358)
T c1vliA_          76 XPAEWILPLLDYCRE---------KQVIFLSTVCDEGSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPXIFSTAGA  146 (358)
T ss_dssp             SCGGGHHHHHHHHHH---------TTCEEECBCCSHHHHHHHHTTCCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTC
T ss_pred             CCHHHHHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHCCCCEEEECHHHCCCHHHHHHHHHCCCCEEEECCCC
T ss_conf             998999999999997---------59829983479999999986399869984122798899999963189718513546


Q ss_pred             CHHHHHHHHHHHHHCCCCEEEE---------------------------EEEECCCCCCHHHHHHHHHHHHHCCCC----
Q ss_conf             9899999999998639946999---------------------------898848776999999999999860756----
Q batch____       141 GPQEAKRAAKLASGLGLRSFNL---------------------------DLMHGLPDQSLEEALGDLRQAIELNPP----  189 (378)
Q Consensus       141 ~~~~~~~~i~~l~~~g~~~v~~---------------------------dlI~GlPgqt~e~~~~~l~~~~~l~~~----  189 (378)
                      +.+++.++++.+++.|-..+.+                           +..+|+.+.|...+.-.+- ++.++..    
T Consensus       147 tl~Ei~~Av~~i~~~g~~~i~llhC~s~YP~p~~~~nL~~i~~L~~~f~~~~vG~SDHt~g~~~~~~a-AvalGA~vIEK  225 (358)
T c1vliA_         147 EISDVHEAWRTIRAEGNNQIAIXHCVAKYPAPPEYSNLSVIPXLAAAFPEAVIGFSDHSEHPTEAPCA-AVRLGAKLIEK  225 (358)
T ss_dssp             CHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTSEEEEEECCSSSSHHHHH-HHHTTCSEEEE
T ss_pred             CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCHHHHHHHHHHCCCCEECCCCCCCCCCHHHHH-HHHCCCEEEEE
T ss_conf             88999999999996799848999558888988667374678999975178602147766554035688-86303000022


Q ss_pred             CEEEEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf             4268865523889656203200495679999999999999779
Q batch____       190 HLSWYQLTIEPNTLFGSRPPVLPDDDALWDIFEQGHQLLTAAG  232 (378)
Q Consensus       190 ~i~~y~l~~~p~T~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G  232 (378)
                      |+++-.-.+-|+-..      ..++++..+|...+++.-...|
T Consensus       226 Hftldk~~~G~Dh~~------Sl~P~el~~lv~~ir~~~~alG  262 (358)
T c1vliA_         226 HFTIDKNLPGADHSF------ALNPDELKEXVDGIRKTEAELK  262 (358)
T ss_dssp             EBCSCTTSSCSSCTT------SBCHHHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCCCEEE------ECCHHHHHHHHHHHHHHHHHCC
T ss_conf             421463478998023------3387999999999999999739