Email l.a.kelley@imperial.ac.uk Description P0AB06 Date Thu Jan 5 11:14:17 GMT 2012 Unique Job ID cb9bc0cc529f56ee

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1lbua2 100.0 26 Fold:Hedgehog/DD-peptidase Superfamily:Hedgehog/DD-peptidase Family:Muramoyl-pentapeptide carboxypeptidase 2 c1lbuA_ 99.9 25 PDB header:hydrolase Chain: A: PDB Molecule:muramoyl-pentapeptide carboxypeptidase; PDBTitle: hydrolase metallo (zn) dd-peptidase 3 c2vo9C_ 98.2 21 PDB header:hydrolase Chain: C: PDB Molecule:l-alanyl-d-glutamate peptidase; PDBTitle: crystal structure of the enzymatically active domain of the2 listeria monocytogenes bacteriophage 500 endolysin ply500 4 d2vo9a1 98.1 25 Fold:Hedgehog/DD-peptidase Superfamily:Hedgehog/DD-peptidase Family:VanY-like 5 d2ibge1 97.2 16 Fold:Hedgehog/DD-peptidase Superfamily:Hedgehog/DD-peptidase Family:Hedgehog (development protein), N-terminal signaling domain 6 c3m1nB_ 97.2 22 PDB header:signaling protein Chain: B: PDB Molecule:sonic hedgehog protein; PDBTitle: crystal structure of human sonic hedgehog n-terminal domain 7 d3d1ma1 97.1 20 Fold:Hedgehog/DD-peptidase Superfamily:Hedgehog/DD-peptidase Family:Hedgehog (development protein), N-terminal signaling domain 8 d1r44a_ 96.0 27 Fold:Hedgehog/DD-peptidase Superfamily:Hedgehog/DD-peptidase Family:VanX-like 9 c2e76D_ 59.7 17 PDB header:photosynthesis Chain: D: PDB Molecule:cytochrome b6-f complex iron-sulfur subunit; PDBTitle: crystal structure of the cytochrome b6f complex with tridecyl-2 stigmatellin (tds) from m.laminosus 10 c2f2fC_ 53.4 23 PDB header:toxin Chain: C: PDB Molecule:cytolethal distending toxin c; PDBTitle: crystal structure of cytolethal distending toxin (cdt) from2 actinobacillus actinomycetemcomitans 11 d2f2fc1 53.4 23 Fold:beta-Trefoil Superfamily:Ricin B-like lectins Family:Ricin B-like 12 d1gtma2 43.3 29 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 13 c1p84E_ 39.2 13 PDB header:oxidoreductase Chain: E: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur PDBTitle: hdbt inhibited yeast cytochrome bc1 complex 14 d1sr4c_ 36.1 21 Fold:beta-Trefoil Superfamily:Ricin B-like lectins Family:Ricin B-like 15 c3g7kD_ 30.3 15 PDB header:isomerase Chain: D: PDB Molecule:3-methylitaconate isomerase; PDBTitle: crystal structure of methylitaconate-delta-isomerase 16 d1bvua2 29.7 28 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 17 c2h31A_ 29.1 9 PDB header:ligase, lyase Chain: A: PDB Molecule:multifunctional protein ade2; PDBTitle: crystal structure of human paics, a bifunctional carboxylase and2 synthetase in purine biosynthesis 18 c3k8zD_ 28.0 20 PDB header:oxidoreductase Chain: D: PDB Molecule:nad-specific glutamate dehydrogenase; PDBTitle: crystal structure of gudb1 a decryptified secondary glutamate2 dehydrogenase from b. subtilis 19 d1am7a_ 26.8 21 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Lambda lysozyme 20 d1euza2 23.8 25 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 21 d1m0wa1 not modelled 22.5 19 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:Eukaryotic glutathione synthetase, substrate-binding domain 22 c2fynO_ not modelled 21.5 21 PDB header:oxidoreductase Chain: O: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur PDBTitle: crystal structure analysis of the double mutant rhodobacter2 sphaeroides bc1 complex 23 d2hgsa1 not modelled 20.6 26 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:Eukaryotic glutathione synthetase, substrate-binding domain 24 c2fyuE_ not modelled 19.5 7 PDB header:oxidoreductase Chain: E: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur subunit, PDBTitle: crystal structure of bovine heart mitochondrial bc1 with jg1442 inhibitor 25 c3kalB_ not modelled 18.4 22 PDB header:ligase Chain: B: PDB Molecule:homoglutathione synthetase; PDBTitle: structure of homoglutathione synthetase from glycine max in2 closed conformation with homoglutathione, adp, a sulfate3 ion, and three magnesium ions bound 26 c3a7kD_ not modelled 14.3 11 PDB header:membrane protein Chain: D: PDB Molecule:halorhodopsin; PDBTitle: crystal structure of halorhodopsin from natronomonas2 pharaonis 27 c3aoeC_ not modelled 14.3 27 PDB header:oxidoreductase Chain: C: PDB Molecule:glutamate dehydrogenase; PDBTitle: crystal structure of hetero-hexameric glutamate dehydrogenase from2 thermus thermophilus (leu bound form) 28 c2pw0A_ not modelled 12.7 9 PDB header:unknown function Chain: A: PDB Molecule:prpf methylaconitate isomerase; PDBTitle: crystal structure of trans-aconitate bound to methylaconitate2 isomerase prpf from shewanella oneidensis 29 c2pq4B_ not modelled 12.4 29 PDB header:chaperone/oxidoreductase Chain: B: PDB Molecule:periplasmic nitrate reductase precursor; PDBTitle: nmr solution structure of napd in complex with napa1-352 signal peptide 30 c2c7hA_ not modelled 12.4 33 PDB header:ubiquitin-like protein Chain: A: PDB Molecule:retinoblastoma-binding protein 6, isoform 3; PDBTitle: solution nmr structure of the dwnn domain from human rbbp6 31 c3n6jA_ not modelled 11.2 10 PDB header:isomerase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of mandelate racemase/muconate lactonizing protein2 from actinobacillus succinogenes 130z 32 c3mfnD_ not modelled 11.2 20 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:uncharacterized protein; PDBTitle: dfer_2879 protein of unknown function from dyadobacter fermentans 33 d2h9fa1 not modelled 10.0 18 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PA0793-like 34 d1b26a2 not modelled 10.0 34 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 35 c2hgsA_ not modelled 9.9 26 PDB header:amine/carboxylate ligase Chain: A: PDB Molecule:protein (glutathione synthetase); PDBTitle: human glutathione synthetase 36 d2hrkb1 not modelled 9.9 47 Fold:GST C-terminal domain-like Superfamily:GST C-terminal domain-like Family:Arc1p N-terminal domain-like 37 c3bbnP_ not modelled 9.7 20 PDB header:ribosome Chain: P: PDB Molecule:ribosomal protein s16; PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome. 38 d1u02a_ not modelled 9.5 21 Fold:HAD-like Superfamily:HAD-like Family:Trehalose-phosphatase 39 d2r25b1 not modelled 9.4 14 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 40 c1bvuF_ not modelled 9.3 29 PDB header:oxidoreductase Chain: F: PDB Molecule:protein (glutamate dehydrogenase); PDBTitle: glutamate dehydrogenase from thermococcus litoralis 41 c1nr1A_ not modelled 9.2 17 PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase 1; PDBTitle: crystal structure of the r463a mutant of human glutamate2 dehydrogenase 42 d1okga3 not modelled 8.6 44 Fold:FKBP-like Superfamily:FKBP-like Family:3-mercaptopyruvate sulfurtransferase, C-terminal domain 43 d1qw1a1 not modelled 8.6 18 Fold:SH3-like barrel Superfamily:C-terminal domain of transcriptional repressors Family:FeoA-like 44 d1v9la2 not modelled 8.4 25 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 45 c1xf7A_ not modelled 8.4 57 PDB header:transcription Chain: A: PDB Molecule:wilms' tumor protein; PDBTitle: high resolution nmr structure of the wilms' tumor2 suppressor protein (wt1) finger 3 46 d1xf7a_ not modelled 8.4 57 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 47 c1m0tB_ not modelled 7.7 19 PDB header:ligase Chain: B: PDB Molecule:glutathione synthetase; PDBTitle: yeast glutathione synthase 48 c3s2xB_ not modelled 7.7 32 PDB header:transferase Chain: B: PDB Molecule:acetyl-coa synthase subunit alpha; PDBTitle: structure of acetyl-coenzyme a synthase alpha subunit c-terminal2 domain 49 c3hdvB_ not modelled 7.0 12 PDB header:transcription regulator Chain: B: PDB Molecule:response regulator; PDBTitle: crystal structure of response regulator receiver protein from2 pseudomonas putida 50 d1bgva2 not modelled 7.0 23 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 51 c2wyoC_ not modelled 7.0 19 PDB header:ligase Chain: C: PDB Molecule:glutathione synthetase; PDBTitle: trypanosoma brucei glutathione synthetase 52 d1sp2a_ not modelled 6.6 57 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 53 d1dz3a_ not modelled 6.6 16 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 54 d1qcza_ not modelled 6.5 19 Fold:Flavodoxin-like Superfamily:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) Family:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 55 c2jx5A_ not modelled 6.5 35 PDB header:ribosomal protein Chain: A: PDB Molecule:glub(s27a); PDBTitle: solution structure of the ubiquitin domain n-terminal to2 the s27a ribosomal subunit of giardia lamblia 56 c1arfA_ not modelled 6.1 43 PDB header:transcription regulation Chain: A: PDB Molecule:yeast transcription factor adr1; PDBTitle: structures of dna-binding mutant zinc finger domains:2 implications for dna binding 57 d2adra1 not modelled 5.8 43 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 58 c3dclC_ not modelled 5.8 40 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:tm1086; PDBTitle: crystal structure of tm1086 59 d1x6ha2 not modelled 5.7 57 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 60 c1areA_ not modelled 5.7 43 PDB header:transcription regulation Chain: A: PDB Molecule:yeast transcription factor adr1; PDBTitle: structures of dna-binding mutant zinc finger domains:2 implications for dna binding 61 d1ynja1 not modelled 5.5 7 Fold:DCoH-like Superfamily:RBP11-like subunits of RNA polymerase Family:RNA polymerase alpha subunit dimerisation domain 62 c3rggD_ not modelled 5.3 13 PDB header:lyase Chain: D: PDB Molecule:phosphoribosylaminoimidazole carboxylase, pure protein; PDBTitle: crystal structure of treponema denticola pure bound to air 63 c3thaB_ not modelled 5.3 13 PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: tryptophan synthase subunit alpha from campylobacter jejuni. 64 c3lk2B_ not modelled 5.3 44 PDB header:protein binding Chain: B: PDB Molecule:f-actin-capping protein subunit beta isoforms 1 and 2; PDBTitle: crystal structure of capz bound to the uncapping motif from carmil 65 c2g9mB_ not modelled 5.1 11 PDB header:electron transport Chain: B: PDB Molecule:phycoerythrin; PDBTitle: crystal structure of the pigment protein phycoerythrin from2 cyanobacterium at 2.6a resolution