Job Description P24186 Confidence 98.06% Date Thu Jan 5 11:41:04 GMT 2012 Rank 96 Aligned Residues 151 % Identity 23% Template c3u62A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from thermotoga maritima Resolution 1.45 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.								.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.
Query Sequence		K	A	C	E	E	V	G	F	V	S	R	S	Y	D	L	P	E	T	T	S	E	A	E	L	L	E	L	I	D	T	L	N	A	D	N	T	I	D	G	I	L	V	Q	L	P	L	P	A	G	I	.	.	.	.	.	.	.	D	N	V	K	V	L	E	R	I	H	P	D	K	D	V	D	G	F	H	P	Y	N	V
Query Conservation																																																				.	.	.	.	.	.	.
Alig confidence																		.	.																.	.																.	.	.	.	.	.	.
Template Conservation																		.	.																.	.
Template Sequence		E	Y	F	K	R	A	G	M	N	H	S	Y	G	M	E	E	.	.	I	P	P	E	S	F	D	T	E	I	R	R	I	L	E	.	.	E	Y	D	G	F	N	A	T	I	P	H	K	E	R	V	M	R	Y	V	E	P	S	E	D	A	Q	R	I	K	A	V	N	C	V	F	R	G	K	G	Y	N	T	D	W	V
Template Known Secondary structure								T										.	.			G	G	G											.	.			S						T	T		T	T	G	G	G	G	G	S										T							T	T
Template Predicted Secondary structure																		.	.																.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.
Predicted Secondary structure																																																											.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	R	L	C	Q	R	A	P	R	L	R	P	C	T	P	R	G	I	V	T	L	L	E	R	Y	N	I	D	T	F	G	L	N	A	V	V	I	G	A	S	N	I	V	G	R	P	M	S	M	E	L	L	L	A	G	C	T	.	T	T	V	T	H	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																											.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.												.																.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.												.
Template Sequence		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	K	S	L	E	G	V	E	V	.	.	.	K	E	P	V	V	V	V	G	A	G	G	.	A	A	R	A	V	I	Y	A	L	L	Q	M	G	V	K	D	I	W	V	V	N	R	T	I	E	R	A	K	A	L	D	F	P	V	K	I	F	S
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	T				.	.	.		S	S							S		.												T	T									S							T			S	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.												.
Template SS confidence
		97																	.	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.						.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																									.	.	.	.	.
Query SS confidence																									.	.	.	.	.
Query Sequence		T	K	N	L	R	H	H	V	E	N	A	D	L	L	I	V	A	V	G	K	P	G	F	.	.	.	.	.	I	P	G	D	W	I	K	E	G	A	I	V	I	D	V
Query Conservation																									.	.	.	.	.
Alig confidence																									.	.	.	.	.
Template Conservation
Template Sequence		L	D	Q	L	D	E	V	V	K	K	A	K	S	L	F	N	T	T	S	V	G	M	K	G	E	E	L	P	V	S	D	D	S	L	K	N	L	S	L	V	Y	D	V
Template Known Secondary structure		G	G	G							T		S						S	S	T	T	T	T	S				S							T	T		S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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