Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	A	T	H	F	A	R	G	I	L	T	E	G	H	L	I	S	V	R	L	P	S	Q	C	H	Q	E	A	R	N	I	P	P	H	R	Q	S	R	F	L	A	S	R	G	L	L	A	E	L	M	F	M	L	Y	G	I	G	E	L	P
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?						?	?	?				?		?									?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		E	I	V	T	L	P	K	G	K	P	V	F	S	D	K	N	L	P	S	F	S	I	S	Y	A	G	N	M	V	G	V	A	L	T	T	E	G	E	C	G	L	D	M	E	L	Q	R	A	T	R	G	F	H	S	P	H	A	P	D	N
Secondary structure
SS confidence
Disorder																																																	?		?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		H	T	F	S	S	N	E	S	L	W	I	S	K	Q	N	D	P	N	E	A	R	A	Q	L	I	T	L	R	R	S	V	L	K	L	T	G	D	V	L	N	D	D	P	R	D	L	Q	L	L	P	I	A	G	R	L	K	C	A	H	V
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		N	H	V	E	A	L	C	D	A	E	D	V	L	V	W	S	V	A	V	T	P	T	I	E	K	L	S	V	W	E	L	D	G	K	H	G	W	K	S	L	P	D	I	H	S	R	A	N	N	P	T	S	R	M	M	R	F	A	Q	L
Secondary structure
SS confidence
Disorder																																			?	?		?	?	?	?		?	?	?	?	?	?			?	?	?	?				?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.
Sequence		S	T	V	K	A	F	S	P	N
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 2cg5 chain A Region: 2 - 213 Aligned: 212 Modelled: 212 Confidence: 100.0% Identity: 18% PDB header:transferase/hydrolase Chain: A: PDB Molecule:l-aminoadipate-semialdehyde dehydrogenase- PDBTitle: structure of aminoadipate-semialdehyde dehydrogenase-2 phosphopantetheinyl transferase in complex with cytosolic3 acyl carrier protein and coenzyme a Phyre2 PDB 1qr0 chain A Region: 14 - 203 Aligned: 184 Modelled: 190 Confidence: 100.0% Identity: 17% PDB header:transferase Chain: A: PDB Molecule:4'-phosphopantetheinyl transferase sfp; PDBTitle: crystal structure of the 4'-phosphopantetheinyl transferase sfp-2 coenzyme a complex Phyre2 PDB 1qr0 chain A domain 2 Region: 98 - 203 Aligned: 101 Modelled: 106 Confidence: 99.8% Identity: 15% Fold: 4'-phosphopantetheinyl transferase Superfamily: 4'-phosphopantetheinyl transferase Family: 4'-Phosphopantetheinyl transferase SFP Phyre2 PDB 1qr0 chain A domain 1 Region: 19 - 95 Aligned: 77 Modelled: 77 Confidence: 99.8% Identity: 22% Fold: 4'-phosphopantetheinyl transferase Superfamily: 4'-phosphopantetheinyl transferase Family: 4'-Phosphopantetheinyl transferase SFP Phyre2 PDB 2was chain A Region: 97 - 204 Aligned: 102 Modelled: 108 Confidence: 99.4% Identity: 16% PDB header:transferase Chain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] synthase; PDBTitle: structure of the fungal type i fas ppt domain Phyre2 PDB 3h88 chain A Region: 99 - 200 Aligned: 102 Modelled: 102 Confidence: 99.4% Identity: 10% PDB header:transferase Chain: A: PDB Molecule:holo-[acyl-carrier-protein] synthase; PDBTitle: crystal structure of 4'-phosphopantetheinyl transferase acps from2 vibrio cholerae o1 biovar eltor Phyre2 PDB 2jbz chain A Region: 99 - 200 Aligned: 102 Modelled: 102 Confidence: 99.3% Identity: 17% PDB header:transferase Chain: A: PDB Molecule:holo-[acyl-carrier-protein] synthase; PDBTitle: crystal structure of the streptomyces coelicolor holo-2 [acyl-carrier-protein] synthase (acps) in complex with3 coenzyme a at 1.6 a Phyre2 PDB 3hyk chain B Region: 99 - 199 Aligned: 96 Modelled: 101 Confidence: 99.2% Identity: 13% PDB header:transferase Chain: B: PDB Molecule:holo-[acyl-carrier-protein] synthase; PDBTitle: 2.31 angstrom resolution crystal structure of a holo-(acyl-carrier-2 protein) synthase from bacillus anthracis str. ames in complex with3 coa (3',5'-adp) Phyre2 PDB 1f7l chain A Region: 99 - 204 Aligned: 101 Modelled: 106 Confidence: 99.2% Identity: 15% Fold: 4'-phosphopantetheinyl transferase Superfamily: 4'-phosphopantetheinyl transferase Family: Holo-(acyl carrier protein) synthase ACPS Phyre2 PDB 1fth chain A Region: 99 - 199 Aligned: 98 Modelled: 101 Confidence: 99.2% Identity: 13% Fold: 4'-phosphopantetheinyl transferase Superfamily: 4'-phosphopantetheinyl transferase Family: Holo-(acyl carrier protein) synthase ACPS Phyre2 PDB 3ne9 chain B Region: 98 - 172 Aligned: 75 Modelled: 75 Confidence: 99.1% Identity: 13% PDB header:transferase Chain: B: PDB Molecule:phosphopantethiene protein transferase, ppt1p; PDBTitle: mycobacterium tuberculosis acyl carrier protein synthase adopts two2 different structural conformations: ph driven conformational changes3 of acps enzyme Phyre2 PDB 2qg8 chain A Region: 99 - 200 Aligned: 102 Modelled: 102 Confidence: 98.9% Identity: 10% PDB header:transferase Chain: A: PDB Molecule:acyl carrier protein synthase py06285; PDBTitle: plasmodium yoelii acyl carrier protein synthase py06285 with adp bound Phyre2 PDB 3f09 chain B Region: 11 - 93 Aligned: 82 Modelled: 83 Confidence: 98.8% Identity: 17% PDB header:transferase Chain: B: PDB Molecule:holo-[acyl-carrier-protein] synthase; PDBTitle: 1.82 angstrom resolution crystal structure of holo-(acyl-carrier-2 protein) synthase (acps) from staphylococcus aureus Phyre2 PDB 3hqj chain A Region: 21 - 98 Aligned: 72 Modelled: 78 Confidence: 98.1% Identity: 22% PDB header:transferase Chain: A: PDB Molecule:holo-[acyl-carrier-protein] synthase; PDBTitle: structure-function analysis of mycobacterium tuberculosis2 acyl carrier protein synthase (acps). Phyre2 PDB 2ch4 chain A Region: 68 - 159 Aligned: 81 Modelled: 89 Confidence: 79.8% Identity: 22% PDB header:transferase/chemotaxis Chain: A: PDB Molecule:chemotaxis protein chea; PDBTitle: complex between bacterial chemotaxis histidine kinase chea2 domains p4 and p5 and receptor-adaptor protein chew Phyre2 PDB 2q8f chain A Region: 73 - 124 Aligned: 42 Modelled: 52 Confidence: 56.9% Identity: 14% PDB header:transferase Chain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 1; PDBTitle: structure of pyruvate dehydrogenase kinase isoform 1 Phyre2 PDB 1y8o chain A Region: 74 - 124 Aligned: 41 Modelled: 51 Confidence: 54.7% Identity: 12% PDB header:transferase Chain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 3; PDBTitle: crystal structure of the pdk3-l2 complex Phyre2 PDB 3k8a chain A Region: 58 - 88 Aligned: 25 Modelled: 31 Confidence: 47.5% Identity: 24% PDB header:dna binding protein Chain: A: PDB Molecule:putative primosomal replication protein; PDBTitle: neisseria gonorrhoeae prib Phyre2 PDB 2bu8 chain A Region: 73 - 124 Aligned: 42 Modelled: 52 Confidence: 45.2% Identity: 10% PDB header:transferase Chain: A: PDB Molecule:pyruvate dehydrogenase kinase isoenzyme 2; PDBTitle: crystal structures of human pyruvate dehydrogenase kinase 22 containing physiological and synthetic ligands Phyre2 PDB 3d2r chain B Region: 73 - 124 Aligned: 42 Modelled: 52 Confidence: 44.3% Identity: 12% PDB header:transferase Chain: B: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 4; PDBTitle: crystal structure of pyruvate dehydrogenase kinase isoform 4 in2 complex with adp Phyre2 1 c2cg5A_ 2 c1qr0A_ 3 d1qr0a2 4 d1qr0a1 5 c2wasA_ 6 c3h88A_ 7 c2jbzA_ 8 c3hykB_ 9 d1f7la_ 10 d1ftha_ 11 c3ne9B_ 12 c2qg8A_ 13 c3f09B_ 14 c3hqjA_ 15 c2ch4A_ 16 c2q8fA_ 17 c1y8oA_ 18 c3k8aA_ 19 c2bu8A_ 20 c3d2rB_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2cg5A_ 100.0 18 PDB header:transferase/hydrolase Chain: A: PDB Molecule:l-aminoadipate-semialdehyde dehydrogenase- PDBTitle: structure of aminoadipate-semialdehyde dehydrogenase-2 phosphopantetheinyl transferase in complex with cytosolic3 acyl carrier protein and coenzyme a 2 c1qr0A_ 100.0 17 PDB header:transferase Chain: A: PDB Molecule:4'-phosphopantetheinyl transferase sfp; PDBTitle: crystal structure of the 4'-phosphopantetheinyl transferase sfp-2 coenzyme a complex 3 d1qr0a2 99.8 15 Fold:4'-phosphopantetheinyl transferase Superfamily:4'-phosphopantetheinyl transferase Family:4'-Phosphopantetheinyl transferase SFP 4 d1qr0a1 99.8 22 Fold:4'-phosphopantetheinyl transferase Superfamily:4'-phosphopantetheinyl transferase Family:4'-Phosphopantetheinyl transferase SFP 5 c2wasA_ 99.4 16 PDB header:transferase Chain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] synthase; PDBTitle: structure of the fungal type i fas ppt domain 6 c3h88A_ 99.4 10 PDB header:transferase Chain: A: PDB Molecule:holo-[acyl-carrier-protein] synthase; PDBTitle: crystal structure of 4'-phosphopantetheinyl transferase acps from2 vibrio cholerae o1 biovar eltor 7 c2jbzA_ 99.3 17 PDB header:transferase Chain: A: PDB Molecule:holo-[acyl-carrier-protein] synthase; PDBTitle: crystal structure of the streptomyces coelicolor holo-2 [acyl-carrier-protein] synthase (acps) in complex with3 coenzyme a at 1.6 a 8 c3hykB_ 99.2 13 PDB header:transferase Chain: B: PDB Molecule:holo-[acyl-carrier-protein] synthase; PDBTitle: 2.31 angstrom resolution crystal structure of a holo-(acyl-carrier-2 protein) synthase from bacillus anthracis str. ames in complex with3 coa (3',5'-adp) 9 d1f7la_ 99.2 15 Fold:4'-phosphopantetheinyl transferase Superfamily:4'-phosphopantetheinyl transferase Family:Holo-(acyl carrier protein) synthase ACPS 10 d1ftha_ 99.2 13 Fold:4'-phosphopantetheinyl transferase Superfamily:4'-phosphopantetheinyl transferase Family:Holo-(acyl carrier protein) synthase ACPS 11 c3ne9B_ 99.1 13 PDB header:transferase Chain: B: PDB Molecule:phosphopantethiene protein transferase, ppt1p; PDBTitle: mycobacterium tuberculosis acyl carrier protein synthase adopts two2 different structural conformations: ph driven conformational changes3 of acps enzyme 12 c2qg8A_ 98.9 10 PDB header:transferase Chain: A: PDB Molecule:acyl carrier protein synthase py06285; PDBTitle: plasmodium yoelii acyl carrier protein synthase py06285 with adp bound 13 c3f09B_ 98.8 17 PDB header:transferase Chain: B: PDB Molecule:holo-[acyl-carrier-protein] synthase; PDBTitle: 1.82 angstrom resolution crystal structure of holo-(acyl-carrier-2 protein) synthase (acps) from staphylococcus aureus 14 c3hqjA_ 98.1 22 PDB header:transferase Chain: A: PDB Molecule:holo-[acyl-carrier-protein] synthase; PDBTitle: structure-function analysis of mycobacterium tuberculosis2 acyl carrier protein synthase (acps). 15 c2ch4A_ 79.8 22 PDB header:transferase/chemotaxis Chain: A: PDB Molecule:chemotaxis protein chea; PDBTitle: complex between bacterial chemotaxis histidine kinase chea2 domains p4 and p5 and receptor-adaptor protein chew 16 c2q8fA_ 56.9 14 PDB header:transferase Chain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 1; PDBTitle: structure of pyruvate dehydrogenase kinase isoform 1 17 c1y8oA_ 54.7 12 PDB header:transferase Chain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 3; PDBTitle: crystal structure of the pdk3-l2 complex 18 c3k8aA_ 47.5 24 PDB header:dna binding protein Chain: A: PDB Molecule:putative primosomal replication protein; PDBTitle: neisseria gonorrhoeae prib 19 c2bu8A_ 45.2 10 PDB header:transferase Chain: A: PDB Molecule:pyruvate dehydrogenase kinase isoenzyme 2; PDBTitle: crystal structures of human pyruvate dehydrogenase kinase 22 containing physiological and synthetic ligands 20 c3d2rB_ 44.3 12 PDB header:transferase Chain: B: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 4; PDBTitle: crystal structure of pyruvate dehydrogenase kinase isoform 4 in2 complex with adp 21 c3a0rA_ not modelled 40.0 17 PDB header:transferase Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of histidine kinase thka (tm1359) in complex with2 response regulator protein trra (tm1360) 22 d1txya_ not modelled 33.2 20 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB 23 c3en2A_ not modelled 28.2 30 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:probable primosomal replication protein n; PDBTitle: three-dimensional structure of the protein prib from2 ralstonia solanacearum at the resolution 2.3a. northeast3 structural genomics consortium target rsr213c. 24 c3fhwB_ not modelled 22.8 24 PDB header:dna binding protein Chain: B: PDB Molecule:primosomal replication protein n; PDBTitle: crystal structure of the protein prib from bordetella parapertussis.2 northeast structural genomics consortium target bpr162. 25 d1v1qa_ not modelled 20.0 20 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB 26 c2z0rA_ not modelled 17.7 27 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative uncharacterized protein ttha0547; PDBTitle: crystal structure of hypothetical protein ttha0547 27 c1gjvA_ not modelled 17.4 12 PDB header:transferase Chain: A: PDB Molecule:[3-methyl-2-oxobutanoate dehydrogenase PDBTitle: branched-chain alpha-ketoacid dehydrogenase kinase (bck)2 complxed with atp-gamma-s 28 c2og4A_ not modelled 16.2 19 PDB header:protein binding Chain: A: PDB Molecule:pre-mrna-splicing factor 8; PDBTitle: structure of an expanded jab1-mpn-like domain of splicing factor prp8p2 from yeast 29 d1i58a_ not modelled 15.5 20 Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Family:Histidine kinase 30 c1pfoA_ not modelled 12.8 20 PDB header:toxin Chain: A: PDB Molecule:perfringolysin o; PDBTitle: perfringolysin o 31 d1pfoa_ not modelled 12.8 20 Fold:Perfringolysin Superfamily:Perfringolysin Family:Perfringolysin 32 d2cb2a1 not modelled 9.8 18 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:SOR-like 33 c3fqmA_ not modelled 8.9 12 PDB header:metal binding protein Chain: A: PDB Molecule:non-structural protein 5a; PDBTitle: crystal structure of a novel dimeric form of hcv ns5a domain i protein 34 d1gxra_ not modelled 8.8 24 Fold:7-bladed beta-propeller Superfamily:WD40 repeat-like Family:WD40-repeat 35 d1ggla_ not modelled 8.8 18 Fold:Lipocalins Superfamily:Lipocalins Family:Fatty acid binding protein-like 36 d2fr2a1 not modelled 8.8 18 Fold:Lipocalins Superfamily:Lipocalins Family:Rv2717c-like 37 d1i8ya_ not modelled 8.2 21 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Granulin repeat Family:Granulin repeat 38 c1i8yA_ not modelled 8.2 21 PDB header:cytokine Chain: A: PDB Molecule:granulin-1; PDBTitle: semi-automatic structure determination of the cg1 3-302 peptide based on aria 39 d2a90a1 not modelled 7.6 33 Fold:WWE domain Superfamily:WWE domain Family:WWE domain 40 d1kqwa_ not modelled 7.4 20 Fold:Lipocalins Superfamily:Lipocalins Family:Fatty acid binding protein-like 41 d2a13a1 not modelled 7.4 25 Fold:Lipocalins Superfamily:Lipocalins Family:Rv2717c-like 42 c2lazA_ not modelled 7.3 22 PDB header:signaling protein/transcription Chain: A: PDB Molecule:e3 ubiquitin-protein ligase smurf1; PDBTitle: structure of the first ww domain of human smurf1 in complex with a2 mono-phosphorylated human smad1 derived peptide 43 c2lb0A_ not modelled 7.3 22 PDB header:signaling protein/transcription Chain: A: PDB Molecule:e3 ubiquitin-protein ligase smurf1; PDBTitle: structure of the first ww domain of human smurf1 in complex with a di-2 phosphorylated human smad1 derived peptide 44 d1gpra_ not modelled 7.0 23 Fold:Barrel-sandwich hybrid Superfamily:Duplicated hybrid motif Family:Glucose permease-like 45 c1zy7A_ not modelled 6.9 16 PDB header:hydrolase Chain: A: PDB Molecule:rna-specific adenosine deaminase b1, isoform PDBTitle: crystal structure of the catalytic domain of an adenosine2 deaminase that acts on rna (hadar2) bound to inositol3 hexakisphosphate (ihp) 46 d1opaa_ not modelled 6.8 10 Fold:Lipocalins Superfamily:Lipocalins Family:Fatty acid binding protein-like 47 d1ftpa_ not modelled 6.7 20 Fold:Lipocalins Superfamily:Lipocalins Family:Fatty acid binding protein-like 48 c2yvqA_ not modelled 6.5 10 PDB header:ligase Chain: A: PDB Molecule:carbamoyl-phosphate synthase; PDBTitle: crystal structure of mgs domain of carbamoyl-phosphate2 synthetase from homo sapiens 49 d1fdqa_ not modelled 6.1 20 Fold:Lipocalins Superfamily:Lipocalins Family:Fatty acid binding protein-like 50 c3pptA_ not modelled 6.0 20 PDB header:lipid binding protein Chain: A: PDB Molecule:sodium-calcium exchanger; PDBTitle: rep1-nxsq fatty acid transporter 51 d1p6pa_ not modelled 5.9 20 Fold:Lipocalins Superfamily:Lipocalins Family:Fatty acid binding protein-like 52 d2ftba1 not modelled 5.9 20 Fold:Lipocalins Superfamily:Lipocalins Family:Fatty acid binding protein-like 53 d1mdca_ not modelled 5.9 30 Fold:Lipocalins Superfamily:Lipocalins Family:Fatty acid binding protein-like 54 d2cbra_ not modelled 5.9 30 Fold:Lipocalins Superfamily:Lipocalins Family:Fatty acid binding protein-like 55 d1lpja_ not modelled 5.9 10 Fold:Lipocalins Superfamily:Lipocalins Family:Fatty acid binding protein-like 56 d1zq1a1 not modelled 5.9 22 Fold:Sm-like fold Superfamily:GatD N-terminal domain-like Family:GatD N-terminal domain-like 57 d2fs6a1 not modelled 5.8 30 Fold:Lipocalins Superfamily:Lipocalins Family:Fatty acid binding protein-like 58 c3ia8A_ not modelled 5.7 34 PDB header:metal binding protein Chain: A: PDB Molecule:thap domain-containing protein 4; PDBTitle: the structure of the c-terminal heme nitrobindin domain of thap2 domain-containing protein 4 from homo sapiens 59 d1pmpa_ not modelled 5.7 20 Fold:Lipocalins Superfamily:Lipocalins Family:Fatty acid binding protein-like 60 d2k4xa1 not modelled 5.5 38 Fold:Rubredoxin-like Superfamily:Zn-binding ribosomal proteins Family:Ribosomal protein S27a 61 d1g7na_ not modelled 5.4 20 Fold:Lipocalins Superfamily:Lipocalins Family:Fatty acid binding protein-like 62 d2f3ga_ not modelled 5.4 23 Fold:Barrel-sandwich hybrid Superfamily:Duplicated hybrid motif Family:Glucose permease-like 63 d1tw4a_ not modelled 5.4 20 Fold:Lipocalins Superfamily:Lipocalins Family:Fatty acid binding protein-like 64 c2lbaA_ not modelled 5.3 20 PDB header:lipid binding protein Chain: A: PDB Molecule:babp protein; PDBTitle: solution structure of chicken ileal babp in complex with2 glycochenodeoxycholic acid 65 d1yiva1 not modelled 5.3 20 Fold:Lipocalins Superfamily:Lipocalins Family:Fatty acid binding protein-like 66 d2gpra_ not modelled 5.2 27 Fold:Barrel-sandwich hybrid Superfamily:Duplicated hybrid motif Family:Glucose permease-like 67 d1glaf_ not modelled 5.2 23 Fold:Barrel-sandwich hybrid Superfamily:Duplicated hybrid motif Family:Glucose permease-like 68 c1e0mA_ not modelled 5.2 17 PDB header:de novo protein Chain: A: PDB Molecule:wwprototype; PDBTitle: prototype ww domain

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0