Job Description P15254 Confidence 100.00% Date Thu Jan 5 11:34:41 GMT 2012 Rank 13 Aligned Residues 288 % Identity 15% Template c3mcqA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thiamine-monophosphate kinase; PDBTitle: crystal structure of thiamine-monophosphate kinase (mfla_0573) from2 methylobacillus flagellatus kt at 1.91 a resolution Resolution 1.91 Å

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		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.					.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.
Query SS confidence																																																								.	.	.	.
Query Sequence		M	I	K	N	T	F	E	T	T	P	D	H	V	L	S	A	Y	K	D	N	A	A	V	M	E	G	S	E	V	G	R	Y	F	A	D	H	E	T	G	R	Y	D	F	H	Q	E	P	A	H	I	L	M	K	V	.	.	.	.	E	T	H	N	H	P	T	A	I	S	P	W	P	G	A	A	T	G	S	G	G	E
Query Conservation																																																								.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	Q	R	Y	F	R	R	A	H	P	S	A	V	L	G	V	G	D	D	A	A	L	I	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	P	G	X	E	L	A	V	S	A	D	X	L	V	A	N	T	H	F	Y	P	N	I	D	P	W	L	I	G	W	K	S	L	A	V	N
Template Known Secondary structure						S								T	T	T				G	G	G	G				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T														T	T	S				S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.																			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	D	E	G	A	T	G	R	G	A	K	P	K	A	G	L	V	G	F	S	V	S	N	L	R	I	P	G	F	E	Q	P	W	E	E	D	F	G	K	P	E	R	I	V	T	A	L	D	I	M	T	E	G	P	L	G	G	A	A	F	N	N	E	F	G	R	P	A	L	N	G	Y	F	R	T	Y	E	E	K
Query Conservation
Alig confidence										.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.					.
Template Conservation										.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.					.
Template Sequence		I	S	D	X	A	A	X	G	.	.	A	Q	P	R	W	A	T	L	T	I	A	L	P	E	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	W	I	S	K	F	A	A	G	F	F	A	C	A	A	Q	F	D	I	A	L	I	G	G	D	T	.	T	R	G	P	.
Template Known Secondary structure								T	T	.	.													S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		T	T									.			S	S	.
Template Predicted Secondary structure										.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.					.
Template SS confidence
		69	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.																						.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		V	N	S	H	N	G	E	E	L	R	G	Y	H	K	P	I	M	L	A	G	G	I	G	N	I	R	A	D	H	.	V	Q	K	G	E	I	N	V	G	A	K	L	V	V	L	G	G	P	A	M	N	I	G	L	G	G	G	A	A	S	S	M	A	S	G	Q	S	D	A	D	L	D	F	A	S	V	Q	R	D	N
Query Conservation																															.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.															.	.	.	.																							.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.																							.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	I	S	V	Q	I	X	G	E	T	P	P	G	A	S	L	L	R	S	T	A	R	A	D	D	D	I	W	V	.	.	.	.	S	G	P	L	G	D	A	A	L	A	L	A	A	I	Q	G	R	Y	P	L	S	D	.	.	.	T	E	L	A	A	C	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T					S	S				T	T						.	.	.	.		S			S										T	T	S	S					.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.																							.	.	.
Template SS confidence
																124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.					.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.				.	.	.	.	180	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.							.	.	.	.	.	540	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.
Query Sequence		P	E	M	E	R	R	C	Q	E	V	I	D	R	C	W	Q	L	G	D	A	N	P	I	L	F	I	H	D	V	G	A	G	G	L	S	N	A	M	P	E	L	V	S	D	G	G	R	G	G	K	F	E	L	R	E	I	L	S	D	E	.	.	.	.	.	.	P	G	M	S	P	L	E	I	W	C	N	E	S	Q
Query Conservation																																																														.	.	.	.	.	.
Alig confidence									.	.	.																					.																														.	.	.	.	.	.
Template Conservation									.	.	.																					.
Template Sequence		K	A	L	H	Q	P	Q	.	.	.	P	R	V	V	L	G	Q	A	L	R	G	L	A	H	S	A	L	D	I	S	.	D	G	L	L	A	D	L	G	H	I	L	E	H	S	Q	V	G	A	E	V	W	L	K	A	I	P	K	S	E	V	V	S	A	H	S	Q	E	V	A	I	Q	K	X	I	L	S	G	G	D
Template Known Secondary structure									.	.	.									T	T	T	T								S	.	S														T							G	G	G	S									T	T	T	S											S
Template Predicted Secondary structure									.	.	.																					.
Template SS confidence
		183	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		549		550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		E	.	R	Y	V	L	A	V	A	A	D	Q	L	P	L	F	D	E	L	C	K	R	E	R	A	P	Y	A	V	I	G	E	A	T	E	E	L	H	L	S	L	H	D	R	H	F	D	N
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		D	Y	E	L	C	F	T	A	S	T	Q	H	R	Q	Q	I	A	D	I	G	R	Q	L	S	L	D	X	A	V	I	G	R	I	T	D	T	Q	Q	L	V	I	H	G	L	D	D	A	P
Template Known Secondary structure											G	G	G											T	T											S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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