Job Description P0AGL7 Confidence 80.21% Date Thu Jan 5 11:29:27 GMT 2012 Rank 34 Aligned Residues 144 % Identity 13% Template c1ipaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:rna 2'-o-ribose methyltransferase; PDBTitle: crystal structure of rna 2'-o ribose methyltransferase Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	D	D	R	E	S	P	L	H	I	H	L	G	Q	V	M	S	R	G	E	K	M	E	F	T	I	Q	K	S	I	E	L	G	V	S	L	I	T	P	L	F	S	E	R	C	G	V	K	L	D	S	E	R	L	N	K	K	L	Q	Q	W	Q	K	I	A	I	A	A	C	E	Q	C	G	R	N	R	V	P	E
Query Conservation
Alig confidence																																								.	.							.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template Conservation																																								.	.							.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template Sequence		E	E	Y	R	P	S	P	D	A	L	I	L	V	A	V	G	L	E	K	P	G	N	L	G	A	V	L	R	S	A	D	A	A	G	A	E	A	V	.	.	L	V	A	G	G	V	.	.	.	.	.	.	D	L	Y	S	P	Q	V	I	R	.	.	.	.	.	.	.	.	N	S	T	G	V	V	F	S	L	R	T
Template Known Secondary structure								T	T								S																		T		S			.	.				S			.	.	.	.	.	.		T	T							.	.	.	.	.	.	.	.		T	T	T	G	G	G	T	S
Template Predicted Secondary structure																																								.	.							.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.							.	.	.	.	.	.	.	.	160									.	.	.	.	.	.	.	.	.	170	.
		150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure															.	.																																				.
Query SS confidence															.	.																																				.
Query Sequence		I	R	P	A	M	D	L	E	A	W	C	A	E	.	.	Q	D	E	G	L	K	L	N	L	H	P	R	A	S	N	S	I	N	T	L	P	L	P	V	E	R	V	R	L	L	I	G	P	E	G	.	G	L	S	A	D	E	I	A	M	T	A	R	Y	Q	F	T	D	I	L	L	G	P	R	V	L	R	T	E	T
Query Conservation															.	.																																				.
Alig confidence					.	.									.	.																							.													.
Template Conservation					.	.																																	.
Template Sequence		L	A	A	.	.	S	E	S	E	V	L	D	W	I	K	Q	H	N	L	P	L	V	A	T	T	P	H	A	E	A	L	Y	W	E	A	N	L	.	R	P	P	V	A	I	A	V	G	P	E	H	E	G	L	R	A	A	W	L	E	A	A	Q	T	Q	V	R	I	P	M	Q	G	Q	A	D	S	L	N	V	S	V
Template Known Secondary structure					.	.												T	T								T	T		S	S	B	G	G	G	S			.		S	S								T	T	S											S				B					S	S
Template Predicted Secondary structure					.	.																																	.
Template SS confidence
		172	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		227	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	L	T	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	A	L	L	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions