34 c1ipaA_ Probab=80.21   E-value=4.7  Score=20.49  Aligned_columns=144  Identities=13%

Q ss_pred             CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCE
Q ss_conf             13788898536999963762379999999976386778999974334245620366579999999999998629874760
Q batch____        70 QIDDRESPLHIHLGQVMSRGEKMEFTIQKSIELGVSLITPLFSERCGVKLDSERLNKKLQQWQKIAIAACEQCGRNRVPE  149 (243)
Q Consensus        70 ~~~~~~~~~~i~L~~alpK~~~~~~il~katELGv~~i~p~~ters~~k~~~~~~~~k~eR~~~i~~ea~kQs~r~~lP~  149 (243)
                      ......+.+.+.++-.+-.+..+-.|++.|.-+|++.+  +.+...      +..+.+.-|        +-...-.++|-
T Consensus       103 ~~~~~~~~~~~lvLd~i~dp~NlG~I~Rta~a~G~~~v--il~~~~------~~~~~~~~r--------~s~Ga~~~~~~  166 (258)
T c1ipaA_         103 EEYRPSPDALILVAVGLEKPGNLGAVLRSADAAGAEAV--LVAGGV------DLYSPQVIR--------NSTGVVFSLRT  166 (258)
T ss_dssp             CCCCCCTTCEEEEEESCCCHHHHHHHHHHHHHHTCSEE--EEESCC------CTTCHHHHH--------HTTTGGGTSCE
T ss_pred             HHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEE--EECCCC------CCCCHHHHH--------CCCCCCEEEEE
T ss_conf             77402679789999458887789999999997199899--987876------746801111--------03680201038


Q ss_pred             ECCCCCHHHHHHC--CCCCEEEEECCCCCCCCHHCCCCCCCEEEEECCCC-CCCHHHHHHHHHCCCEEEECCCCCCHHHH
Q ss_conf             1205898899841--89984999878866430003266672899982488-89999999999779899956998102438
Q batch____       150 IRPAMDLEAWCAE--QDEGLKLNLHPRASNSINTLPLPVERVRLLIGPEG-GLSADEIAMTARYQFTDILLGPRVLRTET  226 (243)
Q Consensus       150 i~~~~~l~~~l~~--~~~~~~l~~~~~~~~~~~~~~~~~~~v~iiIGPEG-Gfs~~Ei~~~~~~gf~~vsLG~rILR~ET  226 (243)
                      ...  +..++++.  ...-.++..+..+......... .+++.+++|.|| |.+++..+.....=..|..=+-.=|=.-.
T Consensus       167 ~~~--~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~-~~~~~lv~G~E~~Gls~~~~~~~d~~v~IP~~~~~~SLNvsv  243 (258)
T c1ipaA_         167 LAA--SESEVLDWIKQHNLPLVATTPHAEALYWEANL-RPPVAIAVGPEHEGLRAAWLEAAQTQVRIPMQGQADSLNVSV  243 (258)
T ss_dssp             EEE--CHHHHHHHHHHTTCCEEEECTTCSSBGGGSCC-CSSEEEEECCTTSCCCHHHHHHCSEEEBCCCCSSCCCCCHHH
T ss_pred             EEE--CHHHHHHHHHHCCCEEEEECCCCCCCHHCCCC-CCCEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCHHHHHH
T ss_conf             898--77999999987898999953787753010647-897799982867899989998378489917998976125999


Q ss_pred             HHHHHH
Q ss_conf             999999
Q batch____       227 TALTAI  232 (243)
Q Consensus       227 Aai~al  232 (243)
                      |+-.++
T Consensus       244 Aaai~l  249 (258)
T c1ipaA_         244 SAALLL  249 (258)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
T ss_conf             999999