Email l.a.kelley@imperial.ac.uk Description P04982 Date Wed Jan 25 15:20:11 GMT 2012 Unique Job ID bd33b754c0ab332a

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3e7nB_ 100.0 86 PDB header:transport protein Chain: B: PDB Molecule:d-ribose high-affinity transport system; PDBTitle: crystal structure of d-ribose high-affinity transport system from2 salmonella typhimurium lt2 2 d1ogda_ 100.0 46 Fold:RbsD-like Superfamily:RbsD-like Family:RbsD-like 3 d2ob5a1 100.0 20 Fold:RbsD-like Superfamily:RbsD-like Family:RbsD-like 4 c3mvkA_ 100.0 23 PDB header:isomerase Chain: A: PDB Molecule:protein fucu; PDBTitle: the crystal structure of fucu from bifidobacterium longum to 1.65a 5 c2wcvI_ 100.0 19 PDB header:isomerase Chain: I: PDB Molecule:l-fucose mutarotase; PDBTitle: crystal structure of bacterial fucu 6 c2wcuB_ 100.0 21 PDB header:isomerase Chain: B: PDB Molecule:protein fucu homolog; PDBTitle: crystal structure of mammalian fucu 7 c3p13B_ 100.0 42 PDB header:isomerase Chain: B: PDB Molecule:d-ribose pyranase; PDBTitle: complex structure of d-ribose pyranase sa240 with d-ribose 8 c2j5dA_ 26.8 33 PDB header:membrane protein Chain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting PDBTitle: nmr structure of bnip3 transmembrane domain in lipid2 bicelles 9 c2dgbA_ 25.8 29 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein purs; PDBTitle: structure of thermus thermophilus purs in the p21 form 10 d1t4aa_ 23.6 14 Fold:PurS-like Superfamily:PurS-like Family:PurS subunit of FGAM synthetase 11 c2jerG_ 21.3 12 PDB header:hydrolase Chain: G: PDB Molecule:agmatine deiminase; PDBTitle: agmatine deiminase of enterococcus faecalis catalyzing its2 reaction. 12 c3l0zC_ 21.2 19 PDB header:transferase Chain: C: PDB Molecule:putative nicotinate-nucleotide-dimethylbenzimidazole PDBTitle: crystal structure of a putative nicotinate-nucleotide-2 dimethylbenzimidazole phosphoribosyltransferase from3 methanocaldococcus jannaschii dsm 2661 13 d1e3da_ 21.0 28 Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nickel-iron hydrogenase, small subunit 14 c2yx5A_ 20.6 32 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0062 protein mj1593; PDBTitle: crystal structure of methanocaldococcus jannaschii purs, one of the2 subunits of formylglycinamide ribonucleotide amidotransferase in the3 purine biosynthetic pathway 15 d2jera1 18.4 12 Fold:Pentein, beta/alpha-propeller Superfamily:Pentein Family:Porphyromonas-type peptidylarginine deiminase 16 d1cc1s_ 16.4 32 Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nickel-iron hydrogenase, small subunit 17 d1frfs_ 16.4 36 Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nickel-iron hydrogenase, small subunit 18 d1gtda_ 16.4 30 Fold:PurS-like Superfamily:PurS-like Family:PurS subunit of FGAM synthetase 19 c3myrE_ 15.6 20 PDB header:oxidoreductase Chain: E: PDB Molecule:hydrogenase (nife) small subunit hyda; PDBTitle: crystal structure of [nife] hydrogenase from allochromatium vinosum in2 its ni-a state 20 d1wuis1 15.4 24 Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nickel-iron hydrogenase, small subunit 21 c1h2aS_ not modelled 15.3 24 PDB header:oxidoreductase Chain: S: PDB Molecule:hydrogenase; PDBTitle: single crystals of hydrogenase from desulfovibrio vulgaris 22 c2xd4A_ not modelled 15.0 0 PDB header:ligase Chain: A: PDB Molecule:phosphoribosylamine--glycine ligase; PDBTitle: nucleotide-bound structures of bacillus subtilis glycinamide2 ribonucleotide synthetase 23 d1w1we_ not modelled 14.9 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Rad21/Rec8-like 24 c1w1wF_ not modelled 14.9 18 PDB header:cell adhesion Chain: F: PDB Molecule:sister chromatid cohesion protein 1; PDBTitle: sc smc1hd:scc1-c complex, atpgs 25 d1gpma3 not modelled 14.0 22 Fold:Alpha-lytic protease prodomain-like Superfamily:GMP synthetase C-terminal dimerisation domain Family:GMP synthetase C-terminal dimerisation domain 26 d1guza1 not modelled 12.6 15 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like 27 c2wpnA_ not modelled 12.4 28 PDB header:oxidoreductase Chain: A: PDB Molecule:periplasmic [nifese] hydrogenase, small subunit; PDBTitle: structure of the oxidised, as-isolated nifese hydrogenase2 from d. vulgaris hildenborough 28 c3rgwS_ not modelled 12.2 28 PDB header:oxidoreductase/oxidoreductase Chain: S: PDB Molecule:membrane-bound hydrogenase (nife) small subunit hoxk; PDBTitle: crystal structure at 1.5 a resolution of an h2-reduced, o2-tolerant2 hydrogenase from ralstonia eutropha unmasks a novel iron-sulfur3 cluster 29 d5ldha1 not modelled 11.8 23 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like 30 c2qk4A_ not modelled 11.0 6 PDB header:ligase Chain: A: PDB Molecule:trifunctional purine biosynthetic protein adenosine-3; PDBTitle: human glycinamide ribonucleotide synthetase 31 d1yq9a1 not modelled 10.9 23 Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nickel-iron hydrogenase, small subunit 32 d1y8xb1 not modelled 10.1 27 Fold:Activating enzymes of the ubiquitin-like proteins Superfamily:Activating enzymes of the ubiquitin-like proteins Family:Ubiquitin activating enzymes (UBA) 33 c3u4gA_ not modelled 9.9 17 PDB header:transferase Chain: A: PDB Molecule:namn:dmb phosphoribosyltransferase; PDBTitle: the structure of cobt from pyrococcus horikoshii 34 d1qkia1 not modelled 9.8 17 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 35 d1llda1 not modelled 9.7 15 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like 36 d1ldna1 not modelled 9.6 25 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like 37 c2cp8A_ not modelled 9.5 14 PDB header:protein binding Chain: A: PDB Molecule:next to brca1 gene 1 protein; PDBTitle: solution structure of the rsgi ruh-046, a uba domain from2 human next to brca1 gene 1 protein (kiaa0049 protein)3 r923h variant 38 d1vq3a_ not modelled 9.4 14 Fold:PurS-like Superfamily:PurS-like Family:PurS subunit of FGAM synthetase 39 c1okgA_ not modelled 9.2 22 PDB header:transferase Chain: A: PDB Molecule:possible 3-mercaptopyruvate sulfurtransferase; PDBTitle: 3-mercaptopyruvate sulfurtransferase from leishmania major 40 d1xkna_ not modelled 8.3 21 Fold:Pentein, beta/alpha-propeller Superfamily:Pentein Family:Porphyromonas-type peptidylarginine deiminase 41 c2r60A_ not modelled 8.3 30 PDB header:transferase Chain: A: PDB Molecule:glycosyl transferase, group 1; PDBTitle: structure of apo sucrose phosphate synthase (sps) of2 halothermothrix orenii 42 d2ldxa1 not modelled 8.2 30 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like 43 c2zw2B_ not modelled 8.1 14 PDB header:ligase Chain: B: PDB Molecule:putative uncharacterized protein sts178; PDBTitle: crystal structure of formylglycinamide ribonucleotide amidotransferase2 iii from sulfolobus tokodaii (stpurs) 44 d1i10a1 not modelled 8.0 20 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like 45 d1jkea_ not modelled 8.0 10 Fold:DTD-like Superfamily:DTD-like Family:DTD-like 46 d1ldma1 not modelled 8.0 12 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like 47 d1hyha1 not modelled 7.8 25 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like 48 d1yjma1 not modelled 7.8 23 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 49 d1hyea1 not modelled 7.5 11 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like 50 d2cmua1 not modelled 7.4 15 Fold:Pentein, beta/alpha-propeller Superfamily:Pentein Family:Porphyromonas-type peptidylarginine deiminase 51 d1llca1 not modelled 7.3 10 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like 52 c3lrxC_ not modelled 7.3 9 PDB header:oxidoreductase Chain: C: PDB Molecule:putative hydrogenase; PDBTitle: crystal structure of the c-terminal domain (residues 78-226)2 of pf1911 hydrogenase from pyrococcus furiosus, northeast3 structural genomics consortium target pfr246a 53 c1yj5C_ not modelled 7.3 27 PDB header:transferase Chain: C: PDB Molecule:5' polynucleotide kinase-3' phosphatase fha domain; PDBTitle: molecular architecture of mammalian polynucleotide kinase, a dna2 repair enzyme 54 d2crna1 not modelled 7.2 7 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 55 c2jy5A_ not modelled 7.2 17 PDB header:signaling protein Chain: A: PDB Molecule:ubiquilin-1; PDBTitle: nmr structure of ubiquilin 1 uba domain 56 d1qx4a2 not modelled 7.2 22 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Reductases 57 d1vpka2 not modelled 7.0 3 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase III, beta subunit 58 d176la_ not modelled 6.7 18 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Phage lysozyme 59 c2okvC_ not modelled 6.6 17 PDB header:hydrolase Chain: C: PDB Molecule:probable d-tyrosyl-trna(tyr) deacylase 1; PDBTitle: c-myc dna unwinding element binding protein 60 c2cwbA_ not modelled 6.4 17 PDB header:protein binding Chain: A: PDB Molecule:chimera of immunoglobulin g binding protein g PDBTitle: solution structure of the ubiquitin-associated domain of2 human bmsc-ubp and its complex with ubiquitin 61 d1veja1 not modelled 6.4 17 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 62 d2daha1 not modelled 6.3 8 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 63 d1zbra1 not modelled 6.1 14 Fold:Pentein, beta/alpha-propeller Superfamily:Pentein Family:Porphyromonas-type peptidylarginine deiminase 64 c3kcnA_ not modelled 6.1 8 PDB header:lyase Chain: A: PDB Molecule:adenylate cyclase homolog; PDBTitle: the crystal structure of adenylate cyclase from2 rhodopirellula baltica 65 d1ez4a1 not modelled 6.1 15 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like 66 c2ys6A_ not modelled 6.0 9 PDB header:ligase Chain: A: PDB Molecule:phosphoribosylglycinamide synthetase; PDBTitle: crystal structure of gar synthetase from geobacillus kaustophilus 67 d1u1ia1 not modelled 6.0 14 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 68 c2dbfA_ not modelled 5.9 15 PDB header:signaling protein Chain: A: PDB Molecule:nuclear factor nf-kappa-b p105 subunit; PDBTitle: solution structure of the death domain in human nuclear2 factor nf-kappa-b p105 subunit 69 d2dnaa1 not modelled 5.8 8 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 70 d1gawa2 not modelled 5.6 26 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Reductases 71 d189la_ not modelled 5.6 18 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Phage lysozyme 72 c1wr1B_ not modelled 5.5 17 PDB header:signaling protein Chain: B: PDB Molecule:ubiquitin-like protein dsk2; PDBTitle: the complex sturcture of dsk2p uba with ubiquitin 73 c2dnaA_ not modelled 5.4 8 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:unnamed protein product; PDBTitle: solution structure of rsgi ruh-056, a uba domain from mouse2 cdna 74 c1umkA_ not modelled 5.4 17 PDB header:oxidoreductase Chain: A: PDB Molecule:nadh-cytochrome b5 reductase; PDBTitle: the structure of human erythrocyte nadh-cytochrome b52 reductase 75 d9ldta1 not modelled 5.4 15 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like 76 d1i0za1 not modelled 5.2 20 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like 77 c3cioA_ not modelled 5.2 18 PDB header:signaling protein, transferase Chain: A: PDB Molecule:tyrosine-protein kinase etk; PDBTitle: the kinase domain of escherichia coli tyrosine kinase etk