Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2xd4A_

Fold library idPDB HeaderMoleculeTitle
c2xd4A_PDB header: ligaseChain: A: PDB Molecule: phosphoribosylamine--glycine ligase;PDBTitle: nucleotide-bound structures of bacillus subtilis glycinamide2 ribonucleotide synthetase


Added to library: Sat Mar 26 08:57:59 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MNVLIIGKGGREHTLAWKAAQSSLVENVFAAPGNDGMAASAQLVNIEESDHAGLVSFAKQNQVGLTIVGP
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)
SST
TT
S

GGGTTT




TT
TT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence EVPLIEGLVDEFEKAGLHVFGPSKAAAIIEGSKQFAKDLMKKYDIPTAEYETFTSFDEAKAYVQEKGAPI
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) TTTT

S

TTTT
TT

B

S

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VIKADGLAAGKGVTVAMTEEEAIACLHDFLEDEKFGDASASVVIEEYLSGEEFSLMAFVKGEKVYPMVIA
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) SS
GGG

SSTTS
TTTTTTSS


STT


B
 .........220.........230.........240.........250.........260.........270.........280
Sequence QDHKRAFDGDKGPNTGGMGAYSPVPQISEETVRHAVETIVKPAAKAMVQEGRSFTGVLYAGLMLTENGSK
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP)

TTT
S
SS
TTS
TTTT


TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence VIEFNARFGDPETQVVLPRMESDLVQVLLDLLDDKEVDLRWKDTAAVSVVLASEGYPESYAKGTPIGSLA
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP) SS

TTGGGB
S
TT





B
S
TTTTSS







 .........360.........370.........380.........390.........400.........410.........420
Sequence AETEQVVVFHAGTKAEGGEFVTNGGRVANVTAFDETFEAARDRVYKAVDEIFKPGLFFRKDIGARALKAA
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)
SSSSSS
SSS
SSSS

TT

S
TTTT
 .
Sequence Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D