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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2jerG_

Fold library idPDB HeaderMoleculeTitle
c2jerG_PDB header: hydrolaseChain: G: PDB Molecule: agmatine deiminase;PDBTitle: agmatine deiminase of enterococcus faecalis catalyzing its2 reaction.


Added to library: Tue Mar 16 13:04:33 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AKRIVGSTPKQDGFRMPGEFEPQEKVWMIWPERPDNWRDGGKPVQEAFTNVAKAISQFTPMNVVVSQQQF
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Known secondary structure (DSSP)

B

S

T
B


TTS




TTTSGGGGTTS

TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence QNCRRQLPPEITVYEMSNNDAWVRDCGPSFVINDHGEIRGVDWTFNAWGGLVDGLYFPWDQDDLVAQKIC
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Known secondary structure (DSSP) S
TTS


SSS
S

TTS


TTT
SSS

TTGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence EIEHVDSYRTDDFVLEGGSFHVDGQGTVLTTEMCLLSEGRNPQLSKEAIEQKLCDYLNVEKVLWLGDGID
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Known secondary structure (DSSP) T



GGG
SSSTSTTT
TTS
T
S


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence PEETNGHVDDVACFIAPGEVACIYTEDQNSPFYEAAQDAYQRLLKMTDAKGRQLKVHKLCCPVKNVTIKG
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Known secondary structure (DSSP) TTTTSS
GGGTTT



TTSTTTT
B
TT

B



SS


S
 .........290.........300.........310.........320.........330.........340.........350
Sequence SFKIDFVEGTMPREDGDICIASYMNFLITNDGVIVPQYGDENDRLALEQVQTMFPDKKIVGVNTVEVVYG
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Known secondary structure (DSSP) S





TTS



TT



TT

TT
S
TTSTTS
TT
 .........360.....
Sequence GGNIHITQQEPKRVG
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Known secondary structure (DSSP) T










Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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