Email l.a.kelley@imperial.ac.uk Description P0ABF6 Date Thu Jan 5 11:15:23 GMT 2012 Unique Job ID bca4e904538aff92

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1alnA_ 100.0 100 PDB header:hydrolase Chain: A: PDB Molecule:cytidine deaminase; PDBTitle: crystal structure of cytidine deaminase complexed with 3-deazacytidine 2 d1alna1 100.0 100 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Cytidine deaminase 3 d1alna2 100.0 100 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Cytidine deaminase 4 d1r5ta_ 100.0 29 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Cytidine deaminase 5 d1uwza_ 100.0 28 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Cytidine deaminase 6 d1mq0a_ 100.0 31 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Cytidine deaminase 7 d2fr5a1 100.0 31 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Cytidine deaminase 8 c3ijfX_ 100.0 34 PDB header:hydrolase Chain: X: PDB Molecule:cytidine deaminase; PDBTitle: crystal structure of cytidine deaminase from mycobacterium2 tuberculosis 9 c3dmoD_ 100.0 32 PDB header:hydrolase Chain: D: PDB Molecule:cytidine deaminase; PDBTitle: 1.6 a crystal structure of cytidine deaminase from2 burkholderia pseudomallei 10 d2d30a1 100.0 29 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Cytidine deaminase 11 c3r2nC_ 100.0 29 PDB header:hydrolase Chain: C: PDB Molecule:cytidine deaminase; PDBTitle: crystal structure of cytidine deaminase from mycobacterium leprae 12 c3b8fB_ 100.0 19 PDB header:hydrolase Chain: B: PDB Molecule:putative blasticidin s deaminase; PDBTitle: crystal structure of the cytidine deaminase from bacillus anthracis 13 c3oj6C_ 100.0 22 PDB header:hydrolase Chain: C: PDB Molecule:blasticidin-s deaminase; PDBTitle: crystal structure of blasticidin s deaminase from coccidioides immitis 14 d2z3ga1 100.0 21 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Cytidine deaminase 15 c2hvwC_ 98.4 22 PDB header:hydrolase Chain: C: PDB Molecule:deoxycytidylate deaminase; PDBTitle: crystal structure of dcmp deaminase from streptococcus2 mutans 16 c2w4lC_ 98.1 27 PDB header:hydrolase Chain: C: PDB Molecule:deoxycytidylate deaminase; PDBTitle: human dcmp deaminase 17 d1z3aa1 97.8 19 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Deoxycytidylate deaminase-like 18 d1p6oa_ 97.7 16 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Deoxycytidylate deaminase-like 19 c3ocqA_ 97.6 21 PDB header:hydrolase Chain: A: PDB Molecule:putative cytosine/adenosine deaminase; PDBTitle: crystal structure of trna-specific adenosine deaminase from salmonella2 enterica 20 d1wkqa_ 97.6 11 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Deoxycytidylate deaminase-like 21 d1wwra1 not modelled 97.5 20 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Deoxycytidylate deaminase-like 22 d2g84a1 not modelled 97.5 20 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Deoxycytidylate deaminase-like 23 d2b3ja1 not modelled 97.5 19 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Deoxycytidylate deaminase-like 24 d1vq2a_ not modelled 97.4 21 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Deoxycytidylate deaminase-like 25 d2a8na1 not modelled 97.2 19 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Deoxycytidylate deaminase-like 26 c2hxvA_ not modelled 97.1 28 PDB header:biosynthetic protein Chain: A: PDB Molecule:diaminohydroxyphosphoribosylaminopyrimidine deaminase/ 5- PDBTitle: crystal structure of a diaminohydroxyphosphoribosylaminopyrimidine2 deaminase/ 5-amino-6-(5-phosphoribosylamino)uracil reductase (tm1828)3 from thermotoga maritima at 1.80 a resolution 27 c2nx8A_ not modelled 96.9 14 PDB header:hydrolase Chain: A: PDB Molecule:trna-specific adenosine deaminase; PDBTitle: the crystal structure of the trna-specific adenosine deaminase from2 streptococcus pyogenes 28 c2o7pA_ not modelled 96.5 23 PDB header:hydrolase, oxidoreductase Chain: A: PDB Molecule:riboflavin biosynthesis protein ribd; PDBTitle: the crystal structure of ribd from escherichia coli in complex with2 the oxidised nadp+ cofactor in the active site of the reductase3 domain 29 c2d5nB_ not modelled 95.8 30 PDB header:hydrolase, oxidoreductase Chain: B: PDB Molecule:riboflavin biosynthesis protein ribd; PDBTitle: crystal structure of a bifunctional deaminase and reductase2 involved in riboflavin biosynthesis 30 d2hxva2 not modelled 95.7 15 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Deoxycytidylate deaminase-like 31 c3dh1D_ not modelled 95.5 13 PDB header:hydrolase Chain: D: PDB Molecule:trna-specific adenosine deaminase 2; PDBTitle: crystal structure of human trna-specific adenosine-34 deaminase2 subunit adat2 32 d2b3za2 not modelled 95.1 29 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Deoxycytidylate deaminase-like 33 d3d37a2 not modelled 57.7 16 Fold:Phage tail proteins Superfamily:Phage tail proteins Family:Baseplate protein-like 34 c2d9sA_ not modelled 45.2 26 PDB header:ligase Chain: A: PDB Molecule:cbl e3 ubiquitin protein ligase; PDBTitle: solution structure of rsgi ruh-049, a uba domain from mouse2 cdna 35 c3gv1A_ not modelled 44.3 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:disulfide interchange protein; PDBTitle: crystal structure of disulfide interchange protein from neisseria2 gonorrhoeae 36 c2do6A_ not modelled 43.1 18 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase cbl-b; PDBTitle: solution structure of rsgi ruh-065, a uba domain from human2 cdna 37 c2eqjA_ not modelled 40.7 29 PDB header:transcription Chain: A: PDB Molecule:metal-response element-binding transcription PDBTitle: solution structure of the tudor domain of metal-response2 element-binding transcription factor 2 38 c2jnhA_ not modelled 37.8 17 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase cbl-b; PDBTitle: solution structure of the uba domain from cbl-b 39 d2fug21 not modelled 28.8 13 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:NQO2-like 40 c3dmlA_ not modelled 28.8 17 PDB header:oxidoreductase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of the periplasmic thioredoxin soxs from2 paracoccus pantotrophus (reduced form) 41 c3g9bA_ not modelled 27.4 16 PDB header:transferase Chain: A: PDB Molecule:dolichyl-diphosphooligosaccharide-protein PDBTitle: crystal structure of reduced ost6l 42 c2hlsB_ not modelled 26.4 14 PDB header:oxidoreductase Chain: B: PDB Molecule:protein disulfide oxidoreductase; PDBTitle: the crystal structure of a protein disulfide oxidoreductase from2 aeropyrum pernix k1 43 c2r2jA_ not modelled 26.3 9 PDB header:chaperone Chain: A: PDB Molecule:thioredoxin domain-containing protein 4; PDBTitle: crystal structure of human erp44 44 c1jn9B_ not modelled 25.9 19 PDB header:hydrolase Chain: B: PDB Molecule:putative l-asparaginase; PDBTitle: structure of putative asparaginase encoded by escherichia coli ybik2 gene 45 c1t3mD_ not modelled 25.9 19 PDB header:hydrolase Chain: D: PDB Molecule:putative l-asparaginase; PDBTitle: structure of the isoaspartyl peptidase with l-asparaginase2 activity from e. coli 46 c1t3mB_ not modelled 25.9 19 PDB header:hydrolase Chain: B: PDB Molecule:putative l-asparaginase; PDBTitle: structure of the isoaspartyl peptidase with l-asparaginase2 activity from e. coli 47 c3p8dB_ not modelled 25.4 16 PDB header:protein binding Chain: B: PDB Molecule:medulloblastoma antigen mu-mb-50.72; PDBTitle: crystal structure of the second tudor domain of human phf20 (homodimer2 form) 48 d1fo5a_ not modelled 24.5 13 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 49 c2ju5A_ not modelled 24.0 7 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin disulfide isomerase; PDBTitle: dsbh oxidoreductase 50 c2zalB_ not modelled 23.5 19 PDB header:hydrolase Chain: B: PDB Molecule:l-asparaginase; PDBTitle: crystal structure of e. coli isoaspartyl aminopeptidase/l-asparaginase2 in complex with l-aspartate 51 c1a8yA_ not modelled 22.2 11 PDB header:calcium-binding protein Chain: A: PDB Molecule:calsequestrin; PDBTitle: crystal structure of calsequestrin from rabbit skeletal muscle2 sarcoplasmic reticulum at 2.4 a resolution 52 d1z67a1 not modelled 21.9 28 Fold:YidB-like Superfamily:YidB-like Family:YidB-like 53 c3kp8A_ not modelled 21.6 27 PDB header:oxidoreductase Chain: A: PDB Molecule:vkorc1/thioredoxin domain protein; PDBTitle: the thioredoxin-like domain of a vkor homolog from2 synechococcus sp. 54 d1zmaa1 not modelled 21.0 29 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 55 c1x5eA_ not modelled 20.7 22 PDB header:electron transport Chain: A: PDB Molecule:thioredoxin domain containing protein 1; PDBTitle: the solution structure of the thioredoxin-like domain of2 human thioredoxin-related transmembrane protein 56 c3gwlB_ not modelled 20.3 25 PDB header:oxidoreductase Chain: B: PDB Molecule:fad-linked sulfhydryl oxidase; PDBTitle: crystal structure of asfv pb119l, a viral sulfhydryl oxidase 57 c3dxbE_ not modelled 19.7 17 PDB header:splicing, transcription Chain: E: PDB Molecule:thioredoxin n-terminally fused to puf60(uhm); PDBTitle: structure of the uhm domain of puf60 fused to thioredoxin 58 c2e5qA_ not modelled 19.5 26 PDB header:transcription Chain: A: PDB Molecule:phd finger protein 19; PDBTitle: solution structure of the tudor domain of phd finger2 protein 19, isoform b [homo sapiens] 59 d1jr8a_ not modelled 19.3 42 Fold:Four-helical up-and-down bundle Superfamily:FAD-dependent thiol oxidase Family:FAD-dependent thiol oxidase 60 c2zalD_ not modelled 19.2 19 PDB header:hydrolase Chain: D: PDB Molecule:l-asparaginase; PDBTitle: crystal structure of e. coli isoaspartyl aminopeptidase/l-asparaginase2 in complex with l-aspartate 61 c3f8uA_ not modelled 18.1 23 PDB header:immune system/isomerase Chain: A: PDB Molecule:protein disulfide-isomerase a3erp57; PDBTitle: tapasin/erp57 heterodimer 62 c3gwnA_ not modelled 18.0 33 PDB header:oxidoreductase Chain: A: PDB Molecule:probable fad-linked sulfhydryl oxidase r596; PDBTitle: crystal structure of the fad binding domain from mimivirus sulfhydryl2 oxidase r596 63 d1sena_ not modelled 17.7 18 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 64 c1senA_ not modelled 17.7 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:thioredoxin-like protein p19; PDBTitle: endoplasmic reticulum protein rp19 o95881 65 c2ppvA_ not modelled 17.2 17 PDB header:transferase Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a protein belonging to the upf0052 (se_0549) from2 staphylococcus epidermidis atcc 12228 at 2.00 a resolution 66 c1t3bA_ not modelled 17.1 12 PDB header:isomerase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbc; PDBTitle: x-ray structure of dsbc from haemophilus influenzae 67 c2nytB_ not modelled 17.0 23 PDB header:hydrolase Chain: B: PDB Molecule:probable c->u-editing enzyme apobec-2; PDBTitle: the apobec2 crystal structure and functional implications2 for aid 68 d1y0ua_ not modelled 16.8 19 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:ArsR-like transcriptional regulators 69 d1hyua4 not modelled 16.4 14 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like 70 c3l9vE_ not modelled 15.5 43 PDB header:oxidoreductase Chain: E: PDB Molecule:putative thiol-disulfide isomerase or thioredoxin; PDBTitle: crystal structure of salmonella enterica serovar typhimurium srga 71 c2zakB_ not modelled 15.5 19 PDB header:hydrolase Chain: B: PDB Molecule:l-asparaginase precursor; PDBTitle: orthorhombic crystal structure of precursor e. coli isoaspartyl2 peptidase/l-asparaginase (ecaiii) with active-site t179a mutation 72 d1v58a1 not modelled 15.2 15 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:DsbC/DsbG C-terminal domain-like 73 d1j9ba_ not modelled 14.8 31 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:ArsC-like 74 c2r41A_ not modelled 14.4 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of the protein of unknown function from enterococcus2 faecalis 75 c1zy7A_ not modelled 14.2 31 PDB header:hydrolase Chain: A: PDB Molecule:rna-specific adenosine deaminase b1, isoform PDBTitle: crystal structure of the catalytic domain of an adenosine2 deaminase that acts on rna (hadar2) bound to inositol3 hexakisphosphate (ihp) 76 c1jzdA_ not modelled 13.9 8 PDB header:oxidoreductase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbc; PDBTitle: dsbc-dsbdalpha complex 77 c3f46A_ not modelled 13.7 17 PDB header:oxidoreductase Chain: A: PDB Molecule:5,10-methenyltetrahydromethanopterin hydrogenase; PDBTitle: the crystal structure of c176a mutated [fe]-hydrogenase (hmd)2 holoenzyme from methanocaldococcus jannaschii 78 c1k2xB_ not modelled 13.7 17 PDB header:hydrolase Chain: B: PDB Molecule:putative l-asparaginase; PDBTitle: crystal structure of putative asparaginase encoded by escherichia coli2 ybik gene 79 c1jn9D_ not modelled 13.7 17 PDB header:hydrolase Chain: D: PDB Molecule:putative l-asparaginase; PDBTitle: structure of putative asparaginase encoded by escherichia coli ybik2 gene 80 c1k2xD_ not modelled 13.7 17 PDB header:hydrolase Chain: D: PDB Molecule:putative l-asparaginase; PDBTitle: crystal structure of putative asparaginase encoded by escherichia coli2 ybik gene 81 c3feuA_ not modelled 13.6 71 PDB header:oxidoreductase Chain: A: PDB Molecule:putative lipoprotein; PDBTitle: crystal structure of dsba-like thioredoxin domain vf_a0457 from vibrio2 fischeri 82 c2albA_ not modelled 13.2 27 PDB header:isomerase Chain: A: PDB Molecule:protein disulfide-isomerase a3; PDBTitle: nmr structure of the n-terminal domain a of the2 glycoprotein chaperone erp57 83 c2hj3A_ not modelled 13.1 33 PDB header:oxidoreductase Chain: A: PDB Molecule:sulfhydryl oxidase erv1p; PDBTitle: structure of the arabidopsis thaliana erv1 thiol oxidase 84 d1qjta_ not modelled 12.8 11 Fold:EF Hand-like Superfamily:EF-hand Family:Eps15 homology domain (EH domain) 85 c3idvA_ not modelled 12.7 32 PDB header:isomerase Chain: A: PDB Molecule:protein disulfide-isomerase a4; PDBTitle: crystal structure of the a0a fragment of erp72 86 d1rioa_ not modelled 12.6 8 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 87 c1sjiA_ not modelled 12.5 0 PDB header:metal binding protein Chain: A: PDB Molecule:calsequestrin, cardiac muscle isoform; PDBTitle: comparing skeletal and cardiac calsequestrin structures and2 their calcium binding: a proposed mechanism for coupled3 calcium binding and protein polymerization 88 c1p4vA_ not modelled 11.8 20 PDB header:hydrolase Chain: A: PDB Molecule:n(4)-(beta-n-acetylglucosaminyl)-l-asparaginase PDBTitle: crystal structure of the glycosylasparaginase precursor2 d151n mutant with glycine 89 c3cawB_ not modelled 11.7 32 PDB header:oxidoreductase Chain: B: PDB Molecule:o-succinylbenzoate synthase; PDBTitle: crystal structure of o-succinylbenzoate synthase from2 bdellovibrio bacteriovorus liganded with mg 90 c2gezF_ not modelled 11.6 24 PDB header:hydrolase Chain: F: PDB Molecule:l-asparaginase beta subunit; PDBTitle: crystal structure of potassium-independent plant asparaginase 91 c2b5eA_ not modelled 11.4 25 PDB header:isomerase Chain: A: PDB Molecule:protein disulfide-isomerase; PDBTitle: crystal structure of yeast protein disulfide isomerase 92 c2kboA_ not modelled 11.3 23 PDB header:hydrolase Chain: A: PDB Molecule:dna dc->du-editing enzyme apobec-3g; PDBTitle: structure, interaction, and real-time monitoring of the2 enzymatic reaction of wild type apobec3g 93 c2wz9A_ not modelled 11.2 13 PDB header:protein binding Chain: A: PDB Molecule:glutaredoxin-3; PDBTitle: crystal structure of the thioredoxin domain of human txnl2 94 c1zypB_ not modelled 11.0 13 PDB header:oxidoreductase Chain: B: PDB Molecule:alkyl hydroperoxide reductase subunit f; PDBTitle: synchrotron reduced form of the n-terminal domain of2 salmonella typhimurium ahpf 95 d2hzba1 not modelled 10.9 20 Fold:CofD-like Superfamily:CofD-like Family:CofD-like 96 d1f9ma_ not modelled 10.7 9 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 97 d1oqca_ not modelled 10.5 25 Fold:Four-helical up-and-down bundle Superfamily:FAD-dependent thiol oxidase Family:FAD-dependent thiol oxidase 98 c1j08A_ not modelled 10.4 17 PDB header:isomerase Chain: A: PDB Molecule:glutaredoxin-like protein; PDBTitle: crystal structure of glutaredoxin-like protein from2 pyrococcus horikoshii 99 d1j08a1 not modelled 10.2 17 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like