Email l.a.kelley@imperial.ac.uk Description P22186 Date Thu Jan 5 11:38:44 GMT 2012 Unique Job ID bb3134e5553afc9c

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1n0fF_ 100.0 25 PDB header:biosynthetic protein Chain: F: PDB Molecule:protein mraz; PDBTitle: crystal structure of a cell division and cell wall2 biosynthesis protein upf0040 from mycoplasma pneumoniae:3 indication of a novel fold with a possible new conserved4 sequence motif 2 d1n0ea_ 100.0 25 Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:Hypothetical protein MraZ 3 c2glwA_ 95.8 18 PDB header:transcription Chain: A: PDB Molecule:92aa long hypothetical protein; PDBTitle: the solution structure of phs018 from pyrococcus horikoshii 4 c2w1tB_ 94.4 21 PDB header:transcription Chain: B: PDB Molecule:stage v sporulation protein t; PDBTitle: crystal structure of b. subtilis spovt 5 d1yfba1 88.9 21 Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:AbrB N-terminal domain-like 6 c2ro5B_ 88.0 21 PDB header:transcription Chain: B: PDB Molecule:stage v sporulation protein t; PDBTitle: rdc-refined solution structure of the n-terminal dna2 recognition domain of the bacillus subtilis transition-3 state regulator spovt 7 d2fy9a1 87.6 21 Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:AbrB N-terminal domain-like 8 c2l66B_ 50.8 12 PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, abrb family; PDBTitle: the dna-recognition fold of sso7c4 suggests a new member of spovt-abrb2 superfamily from archaea. 9 c3hs2H_ 41.5 15 PDB header:antitoxin Chain: H: PDB Molecule:prevent host death protein; PDBTitle: crystal structure of phd truncated to residue 57 in an orthorhombic2 space group 10 c3hryA_ 41.2 15 PDB header:antitoxin Chain: A: PDB Molecule:prevent host death protein; PDBTitle: crystal structure of phd in a trigonal space group and partially2 disordered 11 c3nnqA_ 33.9 21 PDB header:viral protein Chain: A: PDB Molecule:n-terminal domain of moloney murine leukemia virus PDBTitle: crystal structure of the n-terminal domain of moloney murine leukemia2 virus integrase, northeast structural genomics consortium target or3 12 d2odka1 32.2 18 Fold:YefM-like Superfamily:YefM-like Family:YefM-like 13 c2odkD_ 30.3 18 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:hypothetical protein; PDBTitle: putative prevent-host-death protein from nitrosomonas europaea 14 c3qq5A_ 27.5 21 PDB header:oxidoreductase Chain: A: PDB Molecule:small gtp-binding protein; PDBTitle: crystal structure of the [fefe]-hydrogenase maturation protein hydf 15 c2k2eA_ 22.9 32 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein bp2786; PDBTitle: solution nmr structure of bordetella pertussis protein2 bp2786, a mth938-like domain. northeast structural3 genomics consortium target ber31 16 c2c45F_ 21.8 13 PDB header:lyase Chain: F: PDB Molecule:aspartate 1-decarboxylase precursor; PDBTitle: native precursor of pyruvoyl dependent aspartate2 decarboxylase 17 c1pt1B_ 21.1 15 PDB header:lyase Chain: B: PDB Molecule:aspartate 1-decarboxylase; PDBTitle: unprocessed pyruvoyl dependent aspartate decarboxylase with histidine2 11 mutated to alanine 18 d1ppya_ 19.6 15 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Pyruvoyl dependent aspartate decarboxylase, ADC 19 d1wida_ 17.8 23 Fold:DNA-binding pseudobarrel domain Superfamily:DNA-binding pseudobarrel domain Family:B3 DNA binding domain 20 d2zgwa1 16.5 44 Fold:SH3-like barrel Superfamily:C-terminal domain of transcriptional repressors Family:Biotin repressor (BirA) 21 d2a6qb1 not modelled 15.2 10 Fold:YefM-like Superfamily:YefM-like Family:YefM-like 22 d1s6la1 not modelled 15.1 21 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MerB N-terminal domain-like 23 c3if4C_ not modelled 15.1 33 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:integron cassette protein hfx_cass5; PDBTitle: structure from the mobile metagenome of north west arm2 sewage outfall: integron cassette protein hfx_cass5 24 c2zcpA_ not modelled 15.1 5 PDB header:transferase Chain: A: PDB Molecule:dehydrosqualene synthase; PDBTitle: crystal structure of the c(30) carotenoid dehydrosqualene2 synthase from staphylococcus aureus complexed with3 farnesyl thiopyrophosphate 25 d2q4qa1 not modelled 14.9 16 Fold:MTH938-like Superfamily:MTH938-like Family:MTH938-like 26 c2gm2A_ not modelled 14.0 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: nmr structure of xanthomonas campestris xcc1710: northeast2 structural genomics consortium target xcr35 27 d1d7qa_ not modelled 13.7 14 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 28 d2a6qa1 not modelled 13.5 10 Fold:YefM-like Superfamily:YefM-like Family:YefM-like 29 c2kdnA_ not modelled 13.3 13 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein pfe0790c; PDBTitle: solution structure of pfe0790c, a putative bola-like2 protein from the protozoan parasite plasmodium falciparum. 30 c3dwmA_ not modelled 13.0 35 PDB header:transferase Chain: A: PDB Molecule:9.5 kda culture filtrate antigen cfp10a; PDBTitle: crystal structure of mycobacterium tuberculosis cyso, an antigen 31 c2oqkA_ not modelled 12.2 14 PDB header:translation Chain: A: PDB Molecule:putative translation initiation factor eif-1a; PDBTitle: crystal structure of putative cryptosporidium parvum translation2 initiation factor eif-1a 32 d1lpfa2 not modelled 12.0 6 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD/NAD-linked reductases, N-terminal and central domains 33 c2dgyA_ not modelled 11.9 14 PDB header:translation Chain: A: PDB Molecule:mgc11102 protein; PDBTitle: solution structure of the eukaryotic initiation factor 1a2 in mgc11102 protein 34 d2fvta1 not modelled 11.2 8 Fold:MTH938-like Superfamily:MTH938-like Family:MTH938-like 35 d1ef4a_ not modelled 11.0 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:RNA polymerase subunit RPB10 Family:RNA polymerase subunit RPB10 36 d2fi9a1 not modelled 10.3 13 Fold:MTH938-like Superfamily:MTH938-like Family:MTH938-like 37 c3errB_ not modelled 10.1 24 PDB header:ligase Chain: B: PDB Molecule:fusion protein of microtubule binding domain from PDBTitle: microtubule binding domain from mouse cytoplasmic dynein as2 a fusion with seryl-trna synthetase 38 d1m7ja1 not modelled 10.0 23 Fold:Composite domain of metallo-dependent hydrolases Superfamily:Composite domain of metallo-dependent hydrolases Family:D-aminoacylase 39 d2b7oa1 not modelled 9.7 21 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class-II DAHP synthetase 40 c3zvkG_ not modelled 9.5 20 PDB header:antitoxin/toxin/dna Chain: G: PDB Molecule:antitoxin of toxin-antitoxin system vapb; PDBTitle: crystal structure of vapbc2 from rickettsia felis bound to2 a dna fragment from their promoter 41 c2dq3A_ not modelled 9.1 25 PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase; PDBTitle: crystal structure of aq_298 42 d2j7ja2 not modelled 9.1 40 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 43 c2ubpC_ not modelled 8.6 16 PDB header:hydrolase Chain: C: PDB Molecule:protein (urease alpha subunit); PDBTitle: structure of native urease from bacillus pasteurii 44 d1jt8a_ not modelled 8.1 14 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 45 c2dq0A_ not modelled 7.9 29 PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase; PDBTitle: crystal structure of seryl-trna synthetase from pyrococcus2 horikoshii complexed with a seryl-adenylate analog 46 d1xova1 not modelled 7.9 63 Fold:SH3-like barrel Superfamily:Prokaryotic SH3-related domain Family:Ply C-terminal domain-like 47 d1seta2 not modelled 7.9 24 Fold:Class II aaRS and biotin synthetases Superfamily:Class II aaRS and biotin synthetases Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain 48 d1v59a2 not modelled 7.6 10 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD/NAD-linked reductases, N-terminal and central domains 49 d1s32d_ not modelled 7.5 50 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 50 c3df0C_ not modelled 7.5 23 PDB header:hydrolase Chain: C: PDB Molecule:calpastatin; PDBTitle: calcium-dependent complex between m-calpain and calpastatin 51 c1hzeB_ not modelled 7.3 11 PDB header:transferase Chain: B: PDB Molecule:riboflavin synthase alpha chain; PDBTitle: solution structure of the n-terminal domain of riboflavin synthase2 from e. coli 52 c1i18B_ not modelled 7.3 11 PDB header:transferase Chain: B: PDB Molecule:riboflavin synthase alpha chain; PDBTitle: solution structure of the n-terminal domain of riboflavin synthase2 from e. coli 53 c3h5fB_ not modelled 7.3 39 PDB header:de novo protein Chain: B: PDB Molecule:coil ser l16l-pen; PDBTitle: switching the chirality of the metal environment alters the2 coordination mode in designed peptides. 54 c3h5gA_ not modelled 7.3 39 PDB header:de novo protein Chain: A: PDB Molecule:coil ser l16d-pen; PDBTitle: switching the chirality of the metal environment alters the2 coordination mode in designed peptides. 55 c3h5gC_ not modelled 7.3 39 PDB header:de novo protein Chain: C: PDB Molecule:coil ser l16d-pen; PDBTitle: switching the chirality of the metal environment alters the2 coordination mode in designed peptides. 56 c3h5fA_ not modelled 7.3 39 PDB header:de novo protein Chain: A: PDB Molecule:coil ser l16l-pen; PDBTitle: switching the chirality of the metal environment alters the2 coordination mode in designed peptides. 57 c3h5fC_ not modelled 7.3 39 PDB header:de novo protein Chain: C: PDB Molecule:coil ser l16l-pen; PDBTitle: switching the chirality of the metal environment alters the2 coordination mode in designed peptides. 58 c3h5gB_ not modelled 7.3 39 PDB header:de novo protein Chain: B: PDB Molecule:coil ser l16d-pen; PDBTitle: switching the chirality of the metal environment alters the2 coordination mode in designed peptides. 59 d1eqzb_ not modelled 7.2 50 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 60 d1k1da1 not modelled 7.2 25 Fold:Composite domain of metallo-dependent hydrolases Superfamily:Composite domain of metallo-dependent hydrolases Family:Hydantoinase (dihydropyrimidinase) 61 c1sryB_ not modelled 7.1 21 PDB header:ligase(synthetase) Chain: B: PDB Molecule:seryl-trna synthetase; PDBTitle: refined crystal structure of the seryl-trna synthetase from2 thermus thermophilus at 2.5 angstroms resolution 62 d1tzyb_ not modelled 6.9 50 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 63 d2p9ba1 not modelled 6.8 30 Fold:Composite domain of metallo-dependent hydrolases Superfamily:Composite domain of metallo-dependent hydrolases Family:Imidazolonepropionase-like 64 c1e9yB_ not modelled 6.5 16 PDB header:hydrolase Chain: B: PDB Molecule:urease subunit beta; PDBTitle: crystal structure of helicobacter pylori urease in complex with2 acetohydroxamic acid 65 c3la4A_ not modelled 6.5 21 PDB header:hydrolase Chain: A: PDB Molecule:urease; PDBTitle: crystal structure of the first plant urease from jack bean (canavalia2 ensiformis) 66 d1kx5d_ not modelled 6.5 50 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 67 d1lvla2 not modelled 6.4 16 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD/NAD-linked reductases, N-terminal and central domains 68 d2gv8a2 not modelled 6.4 22 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD/NAD-linked reductases, N-terminal and central domains 69 d2gf6a1 not modelled 6.3 4 Fold:Thioesterase/thiol ester dehydrase-isomerase Superfamily:Thioesterase/thiol ester dehydrase-isomerase Family:4HBT-like 70 d2ftwa1 not modelled 6.3 14 Fold:Composite domain of metallo-dependent hydrolases Superfamily:Composite domain of metallo-dependent hydrolases Family:Hydantoinase (dihydropyrimidinase) 71 c3jywM_ not modelled 6.2 19 PDB header:ribosome Chain: M: PDB Molecule:60s ribosomal protein l16(a); PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution 72 d1id3d_ not modelled 6.2 42 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 73 c2vlgD_ not modelled 6.2 21 PDB header:transferase Chain: D: PDB Molecule:sporulation kinase a; PDBTitle: kina pas-a domain, homodimer 74 d2nn6d2 not modelled 6.2 23 Fold:Ribonuclease PH domain 2-like Superfamily:Ribonuclease PH domain 2-like Family:Ribonuclease PH domain 2-like 75 d1d6za4 not modelled 6.1 10 Fold:N domain of copper amine oxidase-like Superfamily:Copper amine oxidase, domain N Family:Copper amine oxidase, domain N 76 d1ejxc1 not modelled 5.9 16 Fold:Composite domain of metallo-dependent hydrolases Superfamily:Composite domain of metallo-dependent hydrolases Family:alpha-Subunit of urease 77 d1vi7a2 not modelled 5.8 14 Fold:Ferredoxin-like Superfamily:EF-G C-terminal domain-like Family:YigZ C-terminal domain-like 78 c2pmzN_ not modelled 5.5 19 PDB header:translation, transferase Chain: N: PDB Molecule:dna-directed rna polymerase subunit n; PDBTitle: archaeal rna polymerase from sulfolobus solfataricus 79 d2p5zx1 not modelled 5.5 23 Fold:OB-fold Superfamily:gp5 N-terminal domain-like Family:gp4 N-terminal domain-like 80 d1wjwa_ not modelled 5.5 9 Fold:TBP-like Superfamily:Phosphoglucomutase, C-terminal domain Family:Phosphoglucomutase, C-terminal domain 81 c4a1aI_ not modelled 5.4 16 PDB header:ribosome Chain: I: PDB Molecule:60s ribosomal protein l13a; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 3. 82 d1ojta2 not modelled 5.4 8 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD/NAD-linked reductases, N-terminal and central domains 83 c3ei4D_ not modelled 5.4 5 PDB header:dna binding protein Chain: D: PDB Molecule:dna damage-binding protein 2; PDBTitle: structure of the hsddb1-hsddb2 complex