Fold library entry viewer: c2ubpC_

Added to library: Tue Mar 16 12:50:34 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	I	N	R	Q	Q	Y	A	E	S	Y	G	P	T	V	G	D	E	V	R	L	A	D	T	D	L	W	I	E	V	E	K	D	Y	T	T	Y	G	D	E	V	N	F	G	G	G	K	V	L	R	E	G	M	G	E	N	G	T	Y	T	R	T	E	N	V	L	D	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T						T	T	S	S								B				T	T						S	T	T		S		S	B	T	T	T	B		S	S			T	T	T	T	B		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	T	N	A	L	I	L	D	Y	T	G	I	Y	K	A	D	I	G	V	K	D	G	Y	I	V	G	I	G	K	G	G	N	P	D	I	M	D	G	V	T	P	N	M	I	V	G	T	A	T	E	V	I	A	A	E	G	K	I	V	T	A	G	G	I	D	T	H	V	H	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T											T	T									B		T	T	T		S	S			T	T		B			T	T							T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	N	P	D	Q	V	D	V	A	L	A	N	G	I	T	T	L	F	G	G	G	T	G	P	A	E	G	S	K	A	T	T	V	T	P	G	P	W	N	I	E	K	M	L	K	S	T	E	G	L	P	I	N	V	G	I	L	G	K	G	H	G	S	S	I	A	P	I	M	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T								T	T									S	S	S							S	S																T	T		S	S					B						S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Q	I	D	A	G	A	A	G	L	I	H	E	D	W	G	A	T	P	A	S	I	D	R	S	L	T	V	A	D	E	A	D	V	Q	V	A	I	H	S	D	T	L	N	E	A	G	F	L	E	D	T	L	R	A	I	N	G	R	V	I	H	S	F	H	V	E	G	A	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T			B			B	G	G	G																		T		B				B			T	T		S	S											T	T						T	T	T	T	S	T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	H	A	P	D	I	M	A	M	A	G	H	P	N	V	L	P	S	S	T	N	P	T	R	P	F	T	V	N	T	I	D	E	H	L	D	M	L	M	V	C	H	H	L	K	Q	N	I	P	E	D	V	A	F	A	D	S	R	I	R	P	E	T	I	A	A	E	D	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	T	T	T	G	G	G	G	G	G		T	T				B			S	T	T	S	S		B	T	T													T	T			T	T	S											S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	H	D	L	G	I	I	S	M	M	S	T	D	A	L	A	M	G	R	A	G	E	M	V	L	R	T	W	Q	T	A	D	K	M	K	K	Q	R	G	P	L	A	E	E	K	N	G	S	D	N	F	R	L	K	R	Y	V	S	K	Y	T	I	N	P	A	I	A	Q	G	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S	S		B					B	T	T	S	S		T	T																			S		T	T			S	S														T								T		T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	H	E	V	G	S	I	E	E	G	K	F	A	D	L	V	L	W	E	P	K	F	F	G	V	K	A	D	R	V	I	K	G	G	I	I	A	Y	A	Q	I	G	D	P	S	A	S	I	P	T	P	Q	P	V	M	G	R	R	M	Y	G	T	V	G	D	L	I	H	D	T	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S	S			T	T	S	B								G	G	G	T	T	T	S		S					T	T										T	T	S	S	S	S		S	S								G	G	G	S	T	T					S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	I	T	F	M	S	K	S	S	I	Q	Q	G	V	P	A	K	L	G	L	K	R	R	I	G	T	V	K	N	C	R	N	I	G	K	K	D	M	K	W	N	D	V	T	T	D	I	D	I	N	P	E	T	Y	E	V	K	V	D	G	E	V	L	T	C	E	P	V	K	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T						T			S							S		S	S			G	G	G	S	T	T											T	T	T						T	T								B	S
	.	.	.	.	.	.	.	.	.
Sequence	P	M	A	Q	R	Y	F	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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