Email l.a.kelley@imperial.ac.uk Description P65643 Date Thu Jan 5 12:10:17 GMT 2012 Unique Job ID b73cc2aa2a814c69

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3ke4B_ 100.0 17 PDB header:transferase Chain: B: PDB Molecule:hypothetical cytosolic protein; PDBTitle: crystal structure of a pduo-type atp:cob(i)alamin adenosyltransferase2 from bacillus cereus 2 c2nt8A_ 100.0 16 PDB header:transferase Chain: A: PDB Molecule:cobalamin adenosyltransferase; PDBTitle: atp bound at the active site of a pduo type atp:co(i)rrinoid2 adenosyltransferase from lactobacillus reuteri 3 c3ci1A_ 100.0 16 PDB header:transferase Chain: A: PDB Molecule:cobalamin adenosyltransferase pduo-like protein; PDBTitle: structure of the pduo-type atp:co(i)rrinoid2 adenosyltransferase from lactobacillus reuteri complexed3 with four-coordinate cob(ii)alamin and atp 4 c2zhzC_ 100.0 19 PDB header:transferase Chain: C: PDB Molecule:atp:cob(i)alamin adenosyltransferase, putative; PDBTitle: crystal structure of a pduo-type atp:cobalamin adenosyltransferase2 from burkholderia thailandensis 5 d1rtyb_ 100.0 18 Fold:Ferritin-like Superfamily:Cobalamin adenosyltransferase-like Family:Cobalamin adenosyltransferase 6 c2ah6B_ 100.0 18 PDB header:transferase Chain: B: PDB Molecule:bh1595, unknown conserved protein; PDBTitle: crystal structure of a putative cobalamin adenosyltransferase (bh1595)2 from bacillus halodurans c-125 at 1.60 a resolution 7 c2g2dA_ 100.0 18 PDB header:transferase Chain: A: PDB Molecule:atp:cobalamin adenosyltransferase; PDBTitle: crystal structure of a putative pduo-type atp:cobalamin2 adenosyltransferase from mycobacterium tuberculosis 8 c1wozA_ 100.0 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:177aa long conserved hypothetical protein (st1454); PDBTitle: crystal structure of uncharacterized protein st1454 from sulfolobus2 tokodaii 9 c1wvtA_ 100.0 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein st2180; PDBTitle: crystal structure of uncharacterized protein st2180 from sulfolobus2 tokodaii 10 d1rtya_ 100.0 19 Fold:Ferritin-like Superfamily:Cobalamin adenosyltransferase-like Family:Cobalamin adenosyltransferase 11 c1nogA_ 100.0 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein ta0546; PDBTitle: crystal structure of conserved protein 0546 from thermoplasma2 acidophilum 12 d1noga_ 100.0 13 Fold:Ferritin-like Superfamily:Cobalamin adenosyltransferase-like Family:Cobalamin adenosyltransferase 13 c2idxA_ 100.0 13 PDB header:transferase Chain: A: PDB Molecule:cob(i)yrinic acid a,c-diamide PDBTitle: structure of human atp:cobalamin adenosyltransferase bound2 to atp. 14 c1wy1B_ 100.0 20 PDB header:transferase Chain: B: PDB Molecule:hypothetical protein ph0671; PDBTitle: crystal structure of the ph0671 protein from pyrococcus horikoshii ot3 15 c3t6gB_ 71.9 18 PDB header:signaling protein, cell adhesion Chain: B: PDB Molecule:breast cancer anti-estrogen resistance protein 1; PDBTitle: structure of the complex between nsp3 (shep1) and p130cas 16 d1niga_ 62.4 13 Fold:Ferritin-like Superfamily:Cobalamin adenosyltransferase-like Family:Hypothetical protein Ta1238 17 d1w4ha1 53.1 28 Fold:Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Superfamily:Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Family:Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 18 d1bala_ 48.2 29 Fold:Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Superfamily:Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Family:Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 19 d2cyua1 46.8 33 Fold:Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Superfamily:Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Family:Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 20 d1r61a_ 41.0 25 Fold:The "swivelling" beta/beta/alpha domain Superfamily:Putative cyclase Family:Putative cyclase 21 c2eq9C_ not modelled 38.6 27 PDB header:oxidoreductase Chain: C: PDB Molecule:pyruvate dehydrogenase complex, dihydrolipoamide PDBTitle: crystal structure of lipoamide dehydrogenase from thermus thermophilus2 hb8 with psbdb 22 c2eq7C_ not modelled 37.2 18 PDB header:oxidoreductase Chain: C: PDB Molecule:2-oxoglutarate dehydrogenase e2 component; PDBTitle: crystal structure of lipoamide dehydrogenase from thermus thermophilus2 hb8 with psbdo 23 c1w3dA_ not modelled 35.9 22 PDB header:transferase Chain: A: PDB Molecule:dihydrolipoyllysine-residue acetyltransferase PDBTitle: nmr structure of the peripheral-subunit binding domain of2 bacillus stearothermophilus e2p 24 c2p8tA_ not modelled 33.1 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ph0730; PDBTitle: hypothetical protein ph0730 from pyrococcus horikoshii ot3 25 c1zwvA_ not modelled 32.0 22 PDB header:transferase Chain: A: PDB Molecule:lipoamide acyltransferase component of branched- PDBTitle: solution structure of the subunit binding domain (hbsbd) of2 the human mitochondrial branched-chain alpha-ketoacid3 dehydrogenase 26 c1w4kA_ not modelled 30.2 17 PDB header:transferase Chain: A: PDB Molecule:pyruvate dehydrogenase e2; PDBTitle: peripheral-subunit binding domains from mesophilic,2 thermophilic, and hyperthermophilic bacteria fold by3 ultrafast, apparently two-state transitions 27 c1v9lA_ not modelled 27.4 29 PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: l-glutamate dehydrogenase from pyrobaculum islandicum2 complexed with nad 28 c3dv0I_ not modelled 26.7 20 PDB header:oxidoreductase/transferase Chain: I: PDB Molecule:dihydrolipoyllysine-residue acetyltransferase PDBTitle: snapshots of catalysis in the e1 subunit of the pyruvate2 dehydrogenase multi-enzyme complex 29 c2eq8C_ not modelled 26.6 22 PDB header:oxidoreductase Chain: C: PDB Molecule:pyruvate dehydrogenase complex, dihydrolipoamide PDBTitle: crystal structure of lipoamide dehydrogenase from thermus thermophilus2 hb8 with psbdp 30 d1b26a1 not modelled 26.2 35 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Aminoacid dehydrogenase-like, C-terminal domain 31 c3godA_ not modelled 26.1 17 PDB header:immune system Chain: A: PDB Molecule:cas1; PDBTitle: structural basis for dnase activity of a conserved protein2 implicated in crispr-mediated antiviral defense 32 d1eija_ not modelled 26.1 50 Fold:RuvA C-terminal domain-like Superfamily:Double-stranded DNA-binding domain Family:Double-stranded DNA-binding domain 33 c2fh0A_ not modelled 25.9 42 PDB header:unknown function Chain: A: PDB Molecule:hypothetical 16.0 kda protein in abf2-chl12 PDBTitle: nmr ensemble of the yeast saccharomyces cerevisiae protein2 ymr074cp core region 34 c2cooA_ not modelled 25.9 23 PDB header:transferase Chain: A: PDB Molecule:lipoamide acyltransferase component of branched- PDBTitle: solution structure of the e3_binding domain of2 dihydrolipoamide branched chaintransacylase 35 d1w85i_ not modelled 25.0 20 Fold:Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Superfamily:Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Family:Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 36 c2ek0B_ not modelled 23.8 18 PDB header:metal binding protein Chain: B: PDB Molecule:stage v sporulation protein s (spovs) related protein; PDBTitle: stage v sporolation protein s (spovs) from thermus thermophilus zinc2 form 37 d1gtma1 not modelled 23.4 29 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Aminoacid dehydrogenase-like, C-terminal domain 38 d1v9la1 not modelled 23.1 29 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Aminoacid dehydrogenase-like, C-terminal domain 39 c2jxnA_ not modelled 22.7 42 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein ymr074c; PDBTitle: solution structure of s. cerevisiae pdcd5-like protein ymr074cp 40 d1bvua1 not modelled 22.2 35 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Aminoacid dehydrogenase-like, C-terminal domain 41 c2hfqA_ not modelled 21.9 27 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein; PDBTitle: nmr structure of protein ne1680 from nitrosomonas europaea:2 northeast structural genomics consortium target net5 42 d2hfqa1 not modelled 21.9 27 Fold:NE1680-like Superfamily:NE1680-like Family:NE1680-like 43 c2tmgD_ not modelled 21.6 35 PDB header:oxidoreductase Chain: D: PDB Molecule:protein (glutamate dehydrogenase); PDBTitle: thermotoga maritima glutamate dehydrogenase mutant s128r,2 t158e, n117r, s160e 44 d2q4qa1 not modelled 21.3 9 Fold:MTH938-like Superfamily:MTH938-like Family:MTH938-like 45 c3k8zD_ not modelled 21.0 18 PDB header:oxidoreductase Chain: D: PDB Molecule:nad-specific glutamate dehydrogenase; PDBTitle: crystal structure of gudb1 a decryptified secondary glutamate2 dehydrogenase from b. subtilis 46 c3nkdB_ not modelled 20.2 22 PDB header:immune system Chain: B: PDB Molecule:crispr-associated protein cas1; PDBTitle: structure of crisp-associated protein cas1 from escherichia coli str.2 k-12 47 d2crua1 not modelled 20.2 45 Fold:RuvA C-terminal domain-like Superfamily:Double-stranded DNA-binding domain Family:Double-stranded DNA-binding domain 48 d1h75a_ not modelled 20.2 17 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 49 c3aogA_ not modelled 19.9 24 PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: crystal structure of glutamate dehydrogenase (gdhb) from thermus2 thermophilus (glu bound form) 50 c1nr1A_ not modelled 19.6 24 PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase 1; PDBTitle: crystal structure of the r463a mutant of human glutamate2 dehydrogenase 51 c2bmaA_ not modelled 19.4 14 PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase (nadp+); PDBTitle: the crystal structure of plasmodium falciparum glutamate2 dehydrogenase, a putative target for novel antimalarial3 drugs 52 d1euza1 not modelled 19.4 24 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Aminoacid dehydrogenase-like, C-terminal domain 53 d2bl7a1 not modelled 18.8 21 Fold:Bromodomain-like Superfamily:Bacteriocin immunity protein-like Family:EntA-Im 54 d1g7oa1 not modelled 18.5 33 Fold:GST C-terminal domain-like Superfamily:GST C-terminal domain-like Family:Glutathione S-transferase (GST), C-terminal domain 55 d1st6a5 not modelled 18.4 8 Fold:Four-helical up-and-down bundle Superfamily:alpha-catenin/vinculin-like Family:alpha-catenin/vinculin 56 d2ge7a1 not modelled 18.4 24 Fold:Nucleocapsid protein dimerization domain Superfamily:Nucleocapsid protein dimerization domain Family:Coronavirus nucleocapsid protein 57 d1hwxa1 not modelled 18.1 24 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Aminoacid dehydrogenase-like, C-terminal domain 58 c3aoeC_ not modelled 17.9 24 PDB header:oxidoreductase Chain: C: PDB Molecule:glutamate dehydrogenase; PDBTitle: crystal structure of hetero-hexameric glutamate dehydrogenase from2 thermus thermophilus (leu bound form) 59 d1ryaa_ not modelled 17.3 10 Fold:Nudix Superfamily:Nudix Family:GDP-mannose mannosyl hydrolase NudD 60 c2lafA_ not modelled 17.2 22 PDB header:membrane protein Chain: A: PDB Molecule:lipoprotein 34; PDBTitle: nmr solution structure of the n-terminal domain of the e. coli2 lipoprotein bamc 61 c1bvuF_ not modelled 16.1 21 PDB header:oxidoreductase Chain: F: PDB Molecule:protein (glutamate dehydrogenase); PDBTitle: glutamate dehydrogenase from thermococcus litoralis 62 d1v43a1 not modelled 15.8 33 Fold:OB-fold Superfamily:MOP-like Family:ABC-transporter additional domain 63 d2giba1 not modelled 15.5 17 Fold:Nucleocapsid protein dimerization domain Superfamily:Nucleocapsid protein dimerization domain Family:Coronavirus nucleocapsid protein 64 d1rw1a_ not modelled 15.2 31 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:ArsC-like 65 c2q4dB_ not modelled 14.9 5 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:lysine decarboxylase-like protein at5g11950; PDBTitle: ensemble refinement of the crystal structure of a lysine2 decarboxylase-like protein from arabidopsis thaliana gene at5g11950 66 c2yfqA_ not modelled 14.8 17 PDB header:oxidoreductase Chain: A: PDB Molecule:nad-specific glutamate dehydrogenase; PDBTitle: crystal structure of glutamate dehydrogenase from2 peptoniphilus asaccharolyticus 67 c2qgoA_ not modelled 14.8 33 PDB header:biosynthetic protein Chain: A: PDB Molecule:putative fe-s biosynthesis protein; PDBTitle: crystal structure of a putative fe-s biosynthesis protein from2 lactobacillus acidophilus 68 c1zunA_ not modelled 14.6 7 PDB header:transferase Chain: A: PDB Molecule:sulfate adenylyltransferase subunit 2; PDBTitle: crystal structure of a gtp-regulated atp sulfurylase2 heterodimer from pseudomonas syringae 69 d2fvta1 not modelled 13.6 11 Fold:MTH938-like Superfamily:MTH938-like Family:MTH938-like 70 d1ydha_ not modelled 12.3 5 Fold:MCP/YpsA-like Superfamily:MCP/YpsA-like Family:MoCo carrier protein-like 71 c3ebqA_ not modelled 11.7 9 PDB header:hydrolase Chain: A: PDB Molecule:molecule: pppde1 (permuted papain fold PDBTitle: crystal structure of human pppde1 72 d2p2ea1 not modelled 11.6 25 Fold:HesB-like domain Superfamily:HesB-like domain Family:HesB-like domain 73 d1abaa_ not modelled 11.3 31 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 74 c2wmyH_ not modelled 11.2 21 PDB header:hydrolase Chain: H: PDB Molecule:putative acid phosphatase wzb; PDBTitle: crystal structure of the tyrosine phosphatase wzb from2 escherichia coli k30 in complex with sulphate. 75 c3lfxE_ not modelled 10.6 18 PDB header:structural genomics, unknown function Chain: E: PDB Molecule:uncharacterized protein; PDBTitle: structure of tm1797, a cas1 protein from thermotoga maritima 76 d1aw9a1 not modelled 10.5 13 Fold:GST C-terminal domain-like Superfamily:GST C-terminal domain-like Family:Glutathione S-transferase (GST), C-terminal domain 77 d2cjra1 not modelled 10.3 14 Fold:Nucleocapsid protein dimerization domain Superfamily:Nucleocapsid protein dimerization domain Family:Coronavirus nucleocapsid protein 78 d2dlka1 not modelled 10.1 43 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 79 d1c4ka3 not modelled 10.0 4 Fold:Ornithine decarboxylase C-terminal domain Superfamily:Ornithine decarboxylase C-terminal domain Family:Ornithine decarboxylase C-terminal domain 80 d1oywa1 not modelled 10.0 27 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:RecQ helicase DNA-binding domain-like 81 d1r7ha_ not modelled 9.9 10 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 82 c1iq8B_ not modelled 9.7 22 PDB header:transferase Chain: B: PDB Molecule:archaeosine trna-guanine transglycosylase; PDBTitle: crystal structure of archaeosine trna-guanine2 transglycosylase from pyrococcus horikoshii 83 c1y88A_ not modelled 9.4 4 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein af1548; PDBTitle: crystal structure of protein of unknown function af1548 84 d1igna2 not modelled 9.4 9 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:DNA-binding domain of rap1 85 d16vpa_ not modelled 9.3 22 Fold:Conserved core of transcriptional regulatory protein vp16 Superfamily:Conserved core of transcriptional regulatory protein vp16 Family:Conserved core of transcriptional regulatory protein vp16 86 c3gkxB_ not modelled 9.3 13 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative arsc family related protein; PDBTitle: crystal structure of putative arsc family related protein from2 bacteroides fragilis 87 d1in4a1 not modelled 9.0 24 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Helicase DNA-binding domain 88 d1ixsb1 not modelled 8.8 29 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Helicase DNA-binding domain 89 d1zuna1 not modelled 8.7 9 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Adenine nucleotide alpha hydrolases-like Family:PAPS reductase-like 90 c3e0sA_ not modelled 8.6 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an uncharacterized protein from2 chlorobium tepidum 91 c3f0iA_ not modelled 8.4 25 PDB header:oxidoreductase Chain: A: PDB Molecule:arsenate reductase; PDBTitle: arsenate reductase from vibrio cholerae. 92 c2yzsB_ not modelled 8.3 20 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of uncharacterized conserved protein from2 aquifex aeolicus 93 d1ixrc1 not modelled 8.0 31 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Helicase DNA-binding domain 94 d1kyha_ not modelled 7.9 30 Fold:Ribokinase-like Superfamily:Ribokinase-like Family:YjeF C-terminal domain-like 95 d1a4ia2 not modelled 7.8 10 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Tetrahydrofolate dehydrogenase/cyclohydrolase 96 c3edpB_ not modelled 7.6 7 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:lin2111 protein; PDBTitle: the crystal structure of the protein lin2111 (functionally unknown)2 from listeria innocua clip11262 97 d1j9ba_ not modelled 7.5 13 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:ArsC-like 98 d1t1va_ not modelled 7.4 13 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:SH3BGR (SH3-binding, glutamic acid-rich protein-like) 99 c3pv9D_ not modelled 7.4 17 PDB header:immune system Chain: D: PDB Molecule:putative uncharacterized protein ph1245; PDBTitle: structure of ph1245, a cas1 from pyrococcus horikoshii