Fold library entry viewer: d16vpa_

Added to library: Tue Mar 16 12:38:13 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	R	M	P	S	P	P	M	P	V	P	P	A	A	L	F	N	R	L	L	D	D	L	G	F	S	A	G	P	A	L	C	T	M	L	D	T	W	N	E	D	L	F	S	A	L	P	T	N	A	D	L	Y	R	E	C	K	F	L	S	T	L	P	S	D	V	V	E	W	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																					T		T	T																S	T	T	S				G	G	G	G	T	T		G	G	G		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	A	Y	V	P	E	R	T	Q	I	D	I	R	A	H	G	D	V	A	F	P	T	L	P	A	T	R	D	G	L	G	L	Y	Y	E	A	L	S	R	F	F	H	A	E	L	R	A	R	E	E	S	Y	R	T	V	L	A	N	F	C	S	A	L	Y	R	Y	L	R	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S			T	T				S	S							S	S	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	R	Q	L	H	R	Q	A	H	M	R	G	R	D	R	D	L	G	E	M	L	R	A	T	I	A	D	R	Y	Y	R	E	T	A	R	L	A	R	V	L	F	L	H	L	Y	L	F	L	T	R	E	I	L	W	A	A	Y	A	E	Q	M	M	R	P	D	L	F	D	C	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T																																																		T						T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	C	C	D	L	E	S	W	R	Q	L	A	G	L	F	Q	P	F	M	F	V	N	G	A	L	T	V	R	G	V	P	I	E	A	R	R	L	R	E	L	N	H	I	R	E	H	L	N	L	P	L	V	R	S	A	A	T	E	E	P	G	A	P	L	T	T	P	P	T	L	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S		S					S	S			S		S	B			S					T	T																		T	T					B		T	T	T	S		T	T	S		S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Sequence	G	N	Q	A	R	A	S	G	Y	F	M	V	L	I	R	A	K	L	D	S	Y	S	S	A	A	P	R	L	S	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S																T	S	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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