Email l.a.kelley@imperial.ac.uk Description P0ADY7 Date Thu Jan 5 11:22:06 GMT 2012 Unique Job ID b5f17fa10606483e

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3bboO_ 100.0 54 PDB header:ribosome Chain: O: PDB Molecule:ribosomal protein l16; PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome 2 d2gyck1 100.0 100 Fold:alpha/beta-Hammerhead Superfamily:Ribosomal protein L16p/L10e Family:Ribosomal protein L16p 3 d2j01q1 100.0 55 Fold:alpha/beta-Hammerhead Superfamily:Ribosomal protein L16p/L10e Family:Ribosomal protein L16p 4 d2zjrj1 100.0 54 Fold:alpha/beta-Hammerhead Superfamily:Ribosomal protein L16p/L10e Family:Ribosomal protein L16p 5 c2ftcI_ 100.0 32 PDB header:ribosome Chain: I: PDB Molecule:mitochondrial ribosomal protein l16; PDBTitle: structural model for the large subunit of the mammalian mitochondrial2 ribosome 6 c2zkrh_ 100.0 23 PDB header:ribosomal protein/rna Chain: H: PDB Molecule:rna expansion segment es12; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 7 d1jj2h_ 100.0 20 Fold:alpha/beta-Hammerhead Superfamily:Ribosomal protein L16p/L10e Family:Ribosomal protein L10e 8 d1ffkf_ 100.0 18 Fold:alpha/beta-Hammerhead Superfamily:Ribosomal protein L16p/L10e Family:Ribosomal protein L10e 9 d1vqoh1 100.0 20 Fold:alpha/beta-Hammerhead Superfamily:Ribosomal protein L16p/L10e Family:Ribosomal protein L10e 10 c1s1iI_ 100.0 19 PDB header:ribosome Chain: I: PDB Molecule:60s ribosomal protein l10; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h. 11 c4a1aH_ 100.0 24 PDB header:ribosome Chain: H: PDB Molecule:60s ribosomal protein l10; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 3. 12 c3iz5I_ 100.0 23 PDB header:ribosome Chain: I: PDB Molecule:60s ribosomal protein l10 (l10e); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 13 c3izcI_ 99.9 20 PDB header:ribosome Chain: I: PDB Molecule:60s ribosomal protein rpl10 (l10e); PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome 14 d2pa2a1 99.7 25 Fold:alpha/beta-Hammerhead Superfamily:Ribosomal protein L16p/L10e Family:Ribosomal protein L10e 15 c2q9vA_ 63.4 18 PDB header:transferase Chain: A: PDB Molecule:membrane-associated guanylate kinase, ww and pdz domain- PDBTitle: crystal structure of the c890s mutant of the 4th pdz domain of human2 membrane associated guanylate kinase 16 c1x45A_ 50.3 17 PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:amyloid beta (a4) precursor protein-binding, PDBTitle: solution structure of the first pdz domain of amyloid beta2 a4 precursor protein-binding family a, member 1 17 d1x45a1 48.3 17 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 18 c2yt7A_ 45.1 16 PDB header:protein transport Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding family PDBTitle: solution structure of the pdz domain of amyloid beta a42 precursor protein-binding family a member 3 19 d1v6ba_ 40.8 18 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 20 d2cssa1 40.5 15 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 21 c2i04B_ not modelled 35.5 9 PDB header:peptide binding protein Chain: B: PDB Molecule:membrane-associated guanylate kinase, ww and pdz PDBTitle: x-ray crystal structure of magi-1 pdz1 bound to the c-2 terminal peptide of hpv18 e6 22 d1uepa_ not modelled 35.3 20 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 23 d2f0aa1 not modelled 33.4 18 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 24 d1rzxa_ not modelled 33.1 16 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 25 c1z87A_ not modelled 31.3 16 PDB header:protein binding Chain: A: PDB Molecule:alpha-1-syntrophin; PDBTitle: solution structure of the split ph-pdz supramodule of alpha-2 syntrophin 26 c1u38A_ not modelled 30.3 18 PDB header:protein transport Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding, PDBTitle: auto-inhibition mechanism of x11s/mints family scaffold2 proteins revealed by the closed conformation of the tandem3 pdz domains 27 c2ehrA_ not modelled 28.8 21 PDB header:structural protein Chain: A: PDB Molecule:inad-like protein; PDBTitle: solution structure of the sixth pdz domain of human inad-2 like protein 28 d1wi4a1 not modelled 28.7 20 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 29 d2byga1 not modelled 28.7 21 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 30 c2ogpA_ not modelled 28.1 12 PDB header:signaling protein Chain: A: PDB Molecule:partitioning-defective 3 homolog; PDBTitle: solution structure of the second pdz domain of par-3 31 c3cyyA_ not modelled 27.8 18 PDB header:peptide binding protein Chain: A: PDB Molecule:tight junction protein zo-1; PDBTitle: the crystal structure of zo-1 pdz2 in complex with the cx43 peptide 32 d1ry4a_ not modelled 27.3 16 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 33 d1nf3c_ not modelled 26.7 15 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 34 c1p1eA_ not modelled 26.6 11 PDB header:protein binding Chain: A: PDB Molecule:glutamate receptor interacting protein; PDBTitle: structural insights into the inter-domain chaperoning of2 tandem pdz domains in glutamate receptor interacting3 proteins 35 d1vb7a_ not modelled 25.9 17 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 36 d1ihja_ not modelled 25.7 14 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 37 c2dmzA_ not modelled 25.5 21 PDB header:protein binding Chain: A: PDB Molecule:inad-like protein; PDBTitle: solution structure of the third pdz domain of human inad-2 like protein 38 d1ozia_ not modelled 25.0 14 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 39 c2dc2A_ not modelled 24.9 11 PDB header:structural protein Chain: A: PDB Molecule:golgi associated pdz and coiled-coil motif PDBTitle: solution structure of pdz domain 40 d1wf8a1 not modelled 24.7 21 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 41 c2gzvA_ not modelled 24.0 9 PDB header:signaling protein Chain: A: PDB Molecule:prkca-binding protein; PDBTitle: the cystal structure of the pdz domain of human pick1 (casp target) 42 d1i16a_ not modelled 24.0 21 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:Interleukin 16 43 d1uewa_ not modelled 23.8 17 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 44 c2jreA_ not modelled 23.8 16 PDB header:de novo protein Chain: A: PDB Molecule:c60-1 pdz domain peptide; PDBTitle: c60-1, a pdz domain designed using statistical coupling2 analysis 45 c2komA_ not modelled 23.7 13 PDB header:signaling protein Chain: A: PDB Molecule:partitioning defective 3 homolog; PDBTitle: solution structure of humar par-3b pdz2 (residues 451-549) 46 d1p1da2 not modelled 23.1 20 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 47 d1vq3a_ not modelled 23.0 31 Fold:PurS-like Superfamily:PurS-like Family:PurS subunit of FGAM synthetase 48 d1whaa_ not modelled 22.7 19 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 49 c1u37A_ not modelled 22.7 18 PDB header:protein transport Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding, PDBTitle: auto-inhibition mechanism of x11s/mints family scaffold2 proteins revealed by the closed conformation of the tandem3 pdz domains 50 d1p1da1 not modelled 22.6 11 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 51 d1wjla_ not modelled 22.6 24 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 52 d1qava_ not modelled 22.4 14 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 53 d2fcfa1 not modelled 22.2 23 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 54 d1gtda_ not modelled 22.1 14 Fold:PurS-like Superfamily:PurS-like Family:PurS subunit of FGAM synthetase 55 d1rgwa_ not modelled 22.0 21 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 56 c3l4fD_ not modelled 21.7 29 PDB header:signaling protein/protein binding Chain: D: PDB Molecule:sh3 and multiple ankyrin repeat domains protein PDBTitle: crystal structure of betapix coiled-coil domain and shank2 pdz complex 57 c2osgB_ not modelled 21.3 16 PDB header:cell adhesion Chain: B: PDB Molecule:tight junction protein zo-2; PDBTitle: solution structure and binding property of the domain-2 swapped dimer of zo2pdz2 58 c3b76A_ not modelled 21.2 24 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase lnx; PDBTitle: crystal structure of the third pdz domain of human ligand-of-numb2 protein-x (lnx1) in complex with the c-terminal peptide from the3 coxsackievirus and adenovirus receptor 59 d1qlca_ not modelled 21.0 23 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 60 c2k1zA_ not modelled 21.0 13 PDB header:signaling protein Chain: A: PDB Molecule:partitioning-defective 3 homolog; PDBTitle: solution structure of par-3 pdz3 61 c2zw2B_ not modelled 20.4 24 PDB header:ligase Chain: B: PDB Molecule:putative uncharacterized protein sts178; PDBTitle: crystal structure of formylglycinamide ribonucleotide amidotransferase2 iii from sulfolobus tokodaii (stpurs) 62 c2iwqA_ not modelled 20.4 23 PDB header:signaling protein Chain: A: PDB Molecule:multiple pdz domain protein; PDBTitle: 7th pdz domain of multiple pdz domain protein mpdz 63 c2edvA_ not modelled 20.0 22 PDB header:protein binding Chain: A: PDB Molecule:ferm and pdz domain-containing protein 1; PDBTitle: solution structure of the pdz domain from human ferm and2 pdz domain containing 1 64 c2xkxB_ not modelled 19.7 18 PDB header:structural protein Chain: B: PDB Molecule:disks large homolog 4; PDBTitle: single particle analysis of psd-95 in negative stain 65 d1wg6a_ not modelled 19.6 15 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 66 c3eggC_ not modelled 19.3 27 PDB header:hydrolase Chain: C: PDB Molecule:spinophilin; PDBTitle: crystal structure of a complex between protein phosphatase 1 alpha2 (pp1) and the pp1 binding and pdz domains of spinophilin 67 c2iwnA_ not modelled 19.3 19 PDB header:signaling protein Chain: A: PDB Molecule:multiple pdz domain protein; PDBTitle: 3rd pdz domain of multiple pdz domain protein mpdz (casp2 target) 68 d2fnea1 not modelled 18.9 16 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 69 d1um7a_ not modelled 18.8 23 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 70 c2dkrA_ not modelled 18.7 25 PDB header:protein transport Chain: A: PDB Molecule:lin-7 homolog b; PDBTitle: solution structure of the pdz domain from human lin-72 homolog b 71 c2jikB_ not modelled 18.5 14 PDB header:membrane protein Chain: B: PDB Molecule:synaptojanin-2 binding protein; PDBTitle: crystal structure of pdz domain of synaptojanin-2 binding2 protein 72 d1uhpa_ not modelled 18.5 21 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 73 c2vwrA_ not modelled 18.1 12 PDB header:protein-binding Chain: A: PDB Molecule:ligand of numb protein x 2; PDBTitle: crystal structure of the second pdz domain of numb-binding2 protein 2 74 c2edpA_ not modelled 18.0 16 PDB header:structural protein Chain: A: PDB Molecule:shroom family member 4; PDBTitle: solution structure of the pdz domain from human shroom2 family member 4 75 d1wfva_ not modelled 17.5 14 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 76 c3hpmA_ not modelled 17.0 7 PDB header:protein binding Chain: A: PDB Molecule:protein interacting with prkca 1; PDBTitle: oxidized dimeric pick1 pdz c46g mutant in complex with the carboxyl2 tail peptide of glur2 77 c2q3gA_ not modelled 16.8 18 PDB header:structural genomics Chain: A: PDB Molecule:pdz and lim domain protein 7; PDBTitle: structure of the pdz domain of human pdlim7 bound to a c-2 terminal extension from human beta-tropomyosin 78 c2fneB_ not modelled 16.8 16 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:multiple pdz domain protein; PDBTitle: the crystal structure of the 13th pdz domain of mpdz 79 c3o46A_ not modelled 16.0 21 PDB header:protein binding Chain: A: PDB Molecule:maguk p55 subfamily member 7; PDBTitle: crystal structure of the pdz domain of mpp7 80 c2jilA_ not modelled 15.6 22 PDB header:membrane protein Chain: A: PDB Molecule:glutamate receptor interacting protein-1; PDBTitle: crystal structure of 2nd pdz domain of glutamate receptor2 interacting protein-1 (grip1) 81 d1d5ga_ not modelled 15.5 14 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 82 c2opgB_ not modelled 15.5 9 PDB header:structural protein Chain: B: PDB Molecule:multiple pdz domain protein; PDBTitle: the crystal structure of the 10th pdz domain of mpdz 83 d1q3oa_ not modelled 15.4 24 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 84 d1um1a_ not modelled 15.4 14 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 85 c2pkuA_ not modelled 15.3 7 PDB header:protein binding Chain: A: PDB Molecule:prkca-binding protein; PDBTitle: solution structure of pick1 pdz in complex with the2 carboxyl tail peptide of glur2 86 d1wfga_ not modelled 15.3 24 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 87 d1zoka1 not modelled 15.1 19 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 88 d1ky9b2 not modelled 14.9 12 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:HtrA-like serine proteases 89 d1x5ra1 not modelled 14.8 18 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 90 c2ka9A_ not modelled 14.8 23 PDB header:cell adhesion Chain: A: PDB Molecule:disks large homolog 4; PDBTitle: solution structure of psd-95 pdz12 complexed with cypin2 peptide 91 d1qpoa2 not modelled 14.8 15 Fold:alpha/beta-Hammerhead Superfamily:Nicotinate/Quinolinate PRTase N-terminal domain-like Family:NadC N-terminal domain-like 92 c2dazA_ not modelled 14.8 16 PDB header:protein binding Chain: A: PDB Molecule:inad-like protein; PDBTitle: solution structure of the 7th pdz domain of inad-like2 protein 93 d2i0xa1 not modelled 14.6 15 Fold:Ferredoxin-like Superfamily:TTP0101/SSO1404-like Family:TTP0101/SSO1404-like 94 c2qv6D_ not modelled 13.9 11 PDB header:hydrolase Chain: D: PDB Molecule:gtp cyclohydrolase iii; PDBTitle: gtp cyclohydrolase iii from m. jannaschii (mj0145)2 complexed with gtp and metal ions 95 d1v62a_ not modelled 13.8 16 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 96 d1t2ma1 not modelled 13.7 21 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 97 d1rgra_ not modelled 13.5 16 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 98 d2fe5a1 not modelled 13.3 21 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 99 c2wdtA_ not modelled 13.2 24 PDB header:hydrolase/protein binding Chain: A: PDB Molecule:ubiquitin carboxyl-terminal hydrolase l3; PDBTitle: crystal structure of plasmodium falciparum uchl3 in complex2 with the suicide inhibitor ubvme