PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4a1aH_

Fold library id	PDB Header	Molecule	Title
c4a1aH_	PDB header: ribosome	Chain: H: PDB Molecule: 60s ribosomal protein l10;	PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 3.

Links to external resources
Added to library: Sat Dec 3 17:40:54 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G R R P A R C Y R Q P K G K P Y P K S R Y N R G V P D A R I R I Y D S G R K K A T V E E F P Y V V H I V S D E K E Q I T S E A L E A A R I A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T S S
S
S
T T
S
S
T T
T T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A N K N L I K F I S K D A F H L R C R V H P W H V L R I N K S G M R G A F G K A L G K A A R V D I G S I L F S V R V K E P H V K Y A I D A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
G G G
T T S
T T
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 .

Sequence T R A K A K F P G R Q K V V T S Q K W G F T K L T R A Q Y S R L R N Q K K L V T D G S N V K V I G E R G P L S R L E L F R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G S S S
S B
T T S S S B T T
T T
T T S
T T T S G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	R	R	P	A	R	C	Y	R	Q	P	K	G	K	P	Y	P	K	S	R	Y	N	R	G	V	P	D	A	R	I	R	I	Y	D	S	G	R	K	K	A	T	V	E	E	F	P	Y	V	V	H	I	V	S	D	E	K	E	Q	I	T	S	E	A	L	E	A	A	R	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G	T	S	S			S					S		T	T			S					S									T	T			T	T	T											S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	N	K	N	L	I	K	F	I	S	K	D	A	F	H	L	R	C	R	V	H	P	W	H	V	L	R	I	N	K	S	G	M	R	G	A	F	G	K	A	L	G	K	A	A	R	V	D	I	G	S	I	L	F	S	V	R	V	K	E	P	H	V	K	Y	A	I	D	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S		G	G	G																			T	T	S															T	T										G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Sequence	T	R	A	K	A	K	F	P	G	R	Q	K	V	V	T	S	Q	K	W	G	F	T	K	L	T	R	A	Q	Y	S	R	L	R	N	Q	K	K	L	V	T	D	G	S	N	V	K	V	I	G	E	R	G	P	L	S	R	L	E	L	F	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G	S	S	S								S	B		T	T	S	S	S	B										T	T						T	T							T	T	S		T	T	T	S	G	G	G