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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c1x45A_ | PDB header: endocytosis/exocytosis | Chain: A: PDB Molecule: amyloid beta (a4) precursor protein-binding, | PDBTitle: solution structure of the first pdz domain of amyloid beta2 a4 precursor protein-binding family a, member 1 |
Added to library: Tue Mar 16 13:54:37 2010 | |
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Links to external resources | |
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Sequence | G | S | S | G | S | S | G | D | V | F | I | E | K | Q | K | G | E | I | L | G | V | V | I | V | E | S | G | W | G | S | I | L | P | T | V | I | I | A | N | M | M | H | G | G | P | A | E | K | S | G | K | L | N | I | G | D | Q | I | M | S | I | N | G | T | S | L | V | G | L | P |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | ![]() | ![]() | T | T | T | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | T | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
Sequence | L | S | T | C | Q | S | I | I | K | G | L | K | N | Q | S | R | V | K | L | N | I | V | S | G | P | S | S | G | ||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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