Email l.a.kelley@imperial.ac.uk Description P0A7R5 Date Thu Jan 5 11:06:06 GMT 2012 Unique Job ID b5776b7bd06f9eaa

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2qalj1 100.0 100 Fold:Ferredoxin-like Superfamily:Ribosomal protein S10 Family:Ribosomal protein S10 2 c3bbnJ_ 100.0 54 PDB header:ribosome Chain: J: PDB Molecule:ribosomal protein s10; PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome. 3 d2uubj1 100.0 55 Fold:Ferredoxin-like Superfamily:Ribosomal protein S10 Family:Ribosomal protein S10 4 c2xznJ_ 100.0 28 PDB header:ribosome Chain: J: PDB Molecule:ribosomal protein s10 containing protein; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 5 c2zkqj_ 100.0 27 PDB header:ribosomal protein/rna Chain: J: PDB Molecule: PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 6 c1s1hJ_ 100.0 25 PDB header:ribosome Chain: J: PDB Molecule:40s ribosomal protein s20; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i. 7 c3iz6J_ 100.0 27 PDB header:ribosome Chain: J: PDB Molecule:40s ribosomal protein s20 (s10p); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 8 c3r2cJ_ 99.9 55 PDB header:transcription/rna Chain: J: PDB Molecule:30s ribosomal protein s10; PDBTitle: crystal structure of antitermination factors nusb and nuse in complex2 with boxa rna 9 d1xbpg1 33.6 29 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Ribosomal protein L11, C-terminal domain Family:Ribosomal protein L11, C-terminal domain 10 d1fnoa3 19.9 19 Fold:Ferredoxin-like Superfamily:Bacterial exopeptidase dimerisation domain Family:Bacterial exopeptidase dimerisation domain 11 d1hc8a_ 15.5 37 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Ribosomal protein L11, C-terminal domain Family:Ribosomal protein L11, C-terminal domain 12 d1mmsa1 15.2 37 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Ribosomal protein L11, C-terminal domain Family:Ribosomal protein L11, C-terminal domain 13 c1s1iK_ 12.6 37 PDB header:ribosome Chain: K: PDB Molecule:60s ribosomal protein l12; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h. 14 c1vq8I_ 11.4 26 PDB header:ribosome Chain: I: PDB Molecule:50s ribosomal protein l11p; PDBTitle: the structure of ccda-phe-cap-bio and the antibiotic sparsomycin bound2 to the large ribosomal subunit of haloarcula marismortui 15 d1dbda_ 10.8 12 Fold:Ferredoxin-like Superfamily:Viral DNA-binding domain Family:Viral DNA-binding domain 16 c2kl8A_ 10.3 22 PDB header:de novo protein Chain: A: PDB Molecule:or15; PDBTitle: solution nmr structure of de novo designed ferredoxin-like2 fold protein, northeast structural genomics consortium3 target or15 17 c2zkri_ 9.8 32 PDB header:ribosomal protein/rna Chain: I: PDB Molecule:rna expansion segment es15 part i; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 18 c1s6xA_ 9.4 36 PDB header:toxin Chain: A: PDB Molecule:kvap channel; PDBTitle: solution structure of vstx 19 c2yqrA_ 8.5 17 PDB header:rna binding protein Chain: A: PDB Molecule:kiaa0907 protein; PDBTitle: solution structure of the kh domain in kiaa0907 protein 20 c1jqmA_ 8.2 37 PDB header:ribosome Chain: A: PDB Molecule:50s ribosomal protein l11; PDBTitle: fitting of l11 protein and elongation factor g (ef-g) in2 the cryo-em map of e. coli 70s ribosome bound with ef-g,3 gdp and fusidic acid 21 d1a7ge_ not modelled 7.8 16 Fold:Ferredoxin-like Superfamily:Viral DNA-binding domain Family:Viral DNA-binding domain 22 c2vhmI_ not modelled 7.8 33 PDB header:ribosome Chain: I: PDB Molecule:50s ribosomal protein l11; PDBTitle: structure of pdf binding helix in complex with the ribosome2 (part 1 of 4) 23 d1f9fa_ not modelled 7.7 8 Fold:Ferredoxin-like Superfamily:Viral DNA-binding domain Family:Viral DNA-binding domain 24 c3izcn_ not modelled 7.6 24 PDB header:ribosome Chain: N: PDB Molecule:60s ribosomal protein rpl14 (l14e); PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome 25 c3bboK_ not modelled 7.6 32 PDB header:ribosome Chain: K: PDB Molecule:ribosomal protein l11; PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome 26 c3ai4A_ not modelled 7.3 20 PDB header:fluorescent protein, replication Chain: A: PDB Molecule:yeast enhanced green fluorescent protein, dna polymerase PDBTitle: crystal structure of yeast enhanced green fluorescent protein - mouse2 polymerase iota ubiquitin binding motif fusion protein 27 d1r8ha_ not modelled 7.1 8 Fold:Ferredoxin-like Superfamily:Viral DNA-binding domain Family:Viral DNA-binding domain 28 d2q79a1 not modelled 7.1 15 Fold:Ferredoxin-like Superfamily:Viral DNA-binding domain Family:Viral DNA-binding domain 29 c3lpeF_ not modelled 6.4 38 PDB header:transferase Chain: F: PDB Molecule:dna-directed rna polymerase subunit e''; PDBTitle: crystal structure of spt4/5ngn heterodimer complex from methanococcus2 jannaschii 30 d1vqoi1 not modelled 6.3 26 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Ribosomal protein L11, C-terminal domain Family:Ribosomal protein L11, C-terminal domain 31 c2ko4A_ not modelled 6.3 0 PDB header:transcription Chain: A: PDB Molecule:mediator of rna polymerase ii transcription subunit 15; PDBTitle: complex structure of the activation domain of gcn4 bound to the2 mediator co-activator domain of gal11/med15 32 d1yvua2 not modelled 6.3 7 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:PIWI domain 33 c2hxgB_ not modelled 6.0 12 PDB header:isomerase Chain: B: PDB Molecule:l-arabinose isomerase; PDBTitle: crystal structure of mn2+ bound ecai 34 d1iwga2 not modelled 5.8 15 Fold:Ferredoxin-like Superfamily:Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Family:Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 35 d1vqoe2 not modelled 5.4 17 Fold:Ribosomal protein L6 Superfamily:Ribosomal protein L6 Family:Ribosomal protein L6 36 c4a1eE_ not modelled 5.4 21 PDB header:ribosome Chain: E: PDB Molecule:60s ribosomal protein l9; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna, 5.8s rrna3 and proteins of molecule 1