Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF08
Confidence89.23%DateThu Jan 5 11:24:49 GMT 2012
Rank358Aligned Residues161
% Identity12%Templatec1nijA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:hypothetical protein yjia; PDBTitle: yjia protein
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   110.........120.........130.........140.........150.........160.........170.........180.........
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  IAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQRPTSPDGTHMAPIMSHGLATNSIGYLVTD
Query Conservation 


 
 







 
 


  

  
  




 
     
    
                                 
Alig confidence 





















..





















.................
















Template Conservation 
 













  

  ..      


 



   

  
.................
      
  
  



Template Sequence  VTLLTGFLGAGKTTLLRHILNE. . QHGYKIAVIENEFGEVSVDDQL. . . . . . . . . . . . . . . . . IGDRATQIKTLTNGCIC
Template Known Secondary structure  SSSSS
S..





SS

S

.................
TTS
TTS
Template Predicted Secondary structure 







..









.................






Template SS confidence 















































































   6...10.........20....... ..30.........40......... 50.........60......
 
   190.........200.........210.........220.........230....... ..240.........250.........260..
Predicted Secondary structure 

















.......




Query SS confidence 















































. . . . . . .
























Query Sequence  DNAMVWRGPMASKALMQMLQETLWPDLDYLVLDMPPGTGDIQLTLAQN. . . . . . . IPVTGAVVVTTPQDIALIDAKKGIV
Query Conservation                    
        
 



 


     
    
.......  

 



  
   
         
Alig confidence 


















..













.











.......
























Template Conservation 
         
  
     ..      
 
 

 
.
 
 
  
   
     
     
  

 


            
Template Sequence  CSRSNELEDALLDLLDNLD. . KGNIQFDRLVIECT. GMADPGPIIQTFFSHEVLCQRYLLDGVIALVDAVHADEQMNQFT
Template Known Secondary structure 
TTS
..TS


S.TT

STTT
Template Predicted Secondary structure 



..








.











Template SS confidence 















































































   67..70.........80..... ....90......... 100.........110.........120.........130.........140...
 
   263......270.........280.........290..
Predicted Secondary structure 











Query SS confidence 





























Query Sequence  MFEKVEVPVLGIVENMSVHICSNCGHHEPI
Query Conservation             

 
               
Alig confidence 





























Template Conservation      

  

 




 
       
   
Template Sequence  IAQSQVGYADRILLTKTDVAGEAEKLHERL
Template Known Secondary structure  T
S
TTT
S
T
Template Predicted Secondary structure 







Template SS confidence 





























   144.....150.........160.........170...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions