Job Description P77748 Confidence 99.22% Date Thu Jan 5 12:32:29 GMT 2012 Rank 39 Aligned Residues 114 % Identity 24% Template c1nekB_ PDB info PDB header:oxidoreductase/electron transport Chain: B: PDB Molecule:succinate dehydrogenase iron-sulfur protein; PDBTitle: complex ii (succinate dehydrogenase) from e. coli with2 ubiquinone bound Resolution 2.60 Å

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		547	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	M	M	K	V	D	A	V	K	R	G	T	F	D	R	Q	I	P	I	A	V	R	Q	Q	W	R	G	A	M	E	C	N	G	N	G	L	C	F	N	F	D	A	R	S	P	M	C	P	S	M	K	I	T	Q	N	R	I	H	S	P	K	G	R	A	T	L	V	R	E	W	L	R	L	L	A	D	R	G	V
Query Conservation
Alig confidence																																											.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Sequence		K	P	Y	L	L	N	N	G	Q	N	P	P	A	R	E	H	L	Q	M	P	E	Q	R	E	K	L	D	G	L	Y	E	C	I	L	C	A	C	C	S	T	S	.	.	.	.	.	.	C	P	S	F	W	W	N	P	D	K	F	I	G	P	A	G	L	L	A	A	Y	R	F	L	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S							S			S	S	S										T	T	T	T	T	S											T	.	.	.	.	.	.								T	T	T	S														.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.							.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		627	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.							.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Predicted Secondary structure																																																.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.
Query Sequence		D	P	L	K	L	E	Q	E	L	P	E	S	G	V	S	L	R	T	L	I	A	R	T	R	N	S	W	H	A	N	K	G	E	Y	D	F	S	H	E	V	K	E	A	M	S	G	.	.	.	.	.	.	C	L	A	C	K	A	C	S	T	Q	C	P	I	K	I	D	V	P	E	F	R	S	R	F	L	Q	L	Y
Query Conservation																																																.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	S	R	D	T	E	T	D	S	R	L	D	G	L	S	D	A	F	S	V	F	R	C	H	S	I	M	N	C	V	S	V	C	P	K	G	L	N	P	T	R	A	I	G	H	I	K	S	M	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		T	T										T	T		S	S	S	T	T	T	T												T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																															183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		701	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	R	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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