39 c1nekB_ Probab=99.22   E-value=7.4e-12  Score=99.06  Aligned_columns=114  Identities=24%

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf             10012245455675434784211013566876315743347888864873214588677836899999999853102333
Q batch____       547 APMMKVDAVKRGTFDRQIPIAVRQQWRGAMECNGNGLCFNFDARSPMCPSMKITQNRIHSPKGRATLVREWLRLLADRGV  626 (1018)
Q Consensus       547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~C~~CG~C~~~~~~~~~CPsy~~t~~e~~sPR~r~~~lr~~~~~~~~~~~  626 (1018)
                      .+....+.............+..+.+.+..+|+.||.|...      ||+|..++++.++|++++..+|-+         
T Consensus       118 ~~~~~~~~~~~~~~e~~~~pe~~~~~~~~~~CI~Cg~C~~~------CP~~~~~~~~~~Gp~~~~~a~~~~---------  182 (238)
T c1nekB_         118 KPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTS------CPSFWWNPDKFIGPAGLLAAYRFL---------  182 (238)
T ss_dssp             CCSCCCCCCSCCSSSCCCCHHHHHTTTTTSCCCCCCHHHHT------CHHHHHCTTTSCCHHHHHHHHHHH---------
T ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC------CCCEECCCCCCCCHHHHHHHHHHH---------
T ss_conf             01355766666544434788899998879967620364443------752320387433879999999987---------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH------HCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             3210012333333322222233333444556655567899999886------3179982011788999899999999999
Q batch____       627 DPLKLEQELPESGVSLRTLIARTRNSWHANKGEYDFSHEVKEAMSG------CLACKACSTQCPIKIDVPEFRSRFLQLY  700 (1018)
Q Consensus       627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~------C~~C~~C~~~CP~~Id~~~l~~~~r~~~  700 (1018)
                                                   .+.......+..+.+..      |+.||.|..+||.|||+.+.+.++|...
T Consensus       183 -----------------------------~d~~d~~~~~r~~~~~~~~g~~~C~~Cg~C~~vCP~gI~~~~~I~~lr~~~  233 (238)
T c1nekB_         183 -----------------------------IDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML  233 (238)
T ss_dssp             -----------------------------TCTTCCCHHHHHHTTCSSSTTTTCCCCCHHHHHCTTCCCHHHHHHHHHHHH
T ss_pred             -----------------------------HCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHH
T ss_conf             -----------------------------224544105678875300221101037970110799879899999999999


Q ss_pred             HHHC
Q ss_conf             9613
Q batch____       701 HTRY  704 (1018)
Q Consensus       701 ~~~~  704 (1018)
                      .+++
T Consensus       234 ~~~~  237 (238)
T c1nekB_         234 LQRN  237 (238)
T ss_dssp             HHHC
T ss_pred             HHHH
T ss_conf             8840