Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	L	G	L	K	Q	V	H	H	I	A	I	I	A	T	D	Y	A	V	S	K	A	F	Y	C	D	I	L	G	F	T	L	Q	S	E	V	Y	R	E	A	R	D	S	W	K	G	D	L	A	L	N	G	Q	Y	V	I	E	L	F	S
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		F	P	F	P	P	E	R	P	S	R	P	E	A	C	G	L	R	H	L	A	F	S	V	D	D	I	D	A	A	V	A	H	L	E	S	H	N	V	K	C	E	T	I	R	V	D	P	Y	T	Q	K	R	F	T	F	F	N	D	P	D
Secondary structure
SS confidence
Disorder					?	?	?	?	?	?	?	?	?	?																														?		?
Disorder confidence
		.	.	.	.	.	.	.	.	.
Sequence		G	L	P	L	E	L	Y	E	Q
Secondary structure
SS confidence
Disorder										?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 3l7t chain B Region: 3 - 128 Aligned: 126 Modelled: 126 Confidence: 99.9% Identity: 43% PDB header:metal binding protein Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of smu.1112c Phyre2 PDB 1f9z chain A Region: 5 - 129 Aligned: 125 Modelled: 125 Confidence: 99.9% Identity: 18% Fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family: Glyoxalase I (lactoylglutathione lyase) Phyre2 PDB 2p25 chain A Region: 2 - 128 Aligned: 125 Modelled: 127 Confidence: 99.9% Identity: 43% PDB header:oxidoreductase Chain: A: PDB Molecule:glyoxalase family protein; PDBTitle: the crystal structure of the glyoxalase family protein from2 enterococcus faecalis Phyre2 PDB 3gm5 chain A Region: 1 - 128 Aligned: 128 Modelled: 128 Confidence: 99.9% Identity: 20% PDB header:isomerase Chain: A: PDB Molecule:lactoylglutathione lyase and related lyases; PDBTitle: crystal structure of a putative methylmalonyl-coenzyme a2 epimerase from thermoanaerobacter tengcongensis at 2.0 a3 resolution Phyre2 PDB 1zsw chain A domain 1 Region: 1 - 128 Aligned: 126 Modelled: 128 Confidence: 99.9% Identity: 21% Fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family: BC1024-like Phyre2 PDB 1zsw chain A Region: 1 - 128 Aligned: 126 Modelled: 128 Confidence: 99.9% Identity: 21% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:glyoxalase family protein; PDBTitle: crystal structure of bacillus cereus metallo protein from glyoxalase2 family Phyre2 PDB 2c21 chain A domain 1 Region: 5 - 129 Aligned: 121 Modelled: 125 Confidence: 99.9% Identity: 21% Fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family: Glyoxalase I (lactoylglutathione lyase) Phyre2 PDB 1qip chain A Region: 6 - 129 Aligned: 123 Modelled: 124 Confidence: 99.9% Identity: 25% Fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family: Glyoxalase I (lactoylglutathione lyase) Phyre2 PDB 3ey7 chain B Region: 1 - 128 Aligned: 122 Modelled: 126 Confidence: 99.9% Identity: 17% PDB header:oxidoreductase Chain: B: PDB Molecule:biphenyl-2,3-diol 1,2-dioxygenase iii-related PDBTitle: structure from the mobile metagenome of v. cholerae.2 integron cassette protein vch_cass1 Phyre2 PDB 3rmu chain D Region: 3 - 128 Aligned: 126 Modelled: 126 Confidence: 99.9% Identity: 24% PDB header:isomerase Chain: D: PDB Molecule:methylmalonyl-coa epimerase, mitochondrial; PDBTitle: crystal structure of human methylmalonyl-coa epimerase, mcee Phyre2 PDB 2qh0 chain A Region: 5 - 129 Aligned: 125 Modelled: 125 Confidence: 99.9% Identity: 15% PDB header:lyase Chain: A: PDB Molecule:lactoylglutathione lyase; PDBTitle: crystal structure of a glyoxalase from clostridium acetobutylicum Phyre2 PDB 1ss4 chain A Region: 2 - 129 Aligned: 127 Modelled: 128 Confidence: 99.9% Identity: 21% Fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family: Hypothetical protein BC1747 Phyre2 PDB 3huh chain A Region: 2 - 128 Aligned: 120 Modelled: 127 Confidence: 99.9% Identity: 17% PDB header:viral protein Chain: A: PDB Molecule:virulence protein stm3117; PDBTitle: the structure of biphenyl-2,3-diol 1,2-dioxygenase iii-2 related protein from salmonella typhimurium Phyre2 PDB 3oa4 chain A Region: 3 - 129 Aligned: 127 Modelled: 127 Confidence: 99.9% Identity: 17% PDB header:lyase Chain: A: PDB Molecule:glyoxalase; PDBTitle: crystal structure of hypothetical protein bh1468 from bacillus2 halodurans c-125 Phyre2 PDB 1mpy chain A domain 2 Region: 2 - 128 Aligned: 122 Modelled: 127 Confidence: 99.9% Identity: 14% Fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family: Extradiol dioxygenases Phyre2 PDB 1jc4 chain A Region: 3 - 129 Aligned: 127 Modelled: 127 Confidence: 99.8% Identity: 18% Fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family: Methylmalonyl-CoA epimerase Phyre2 PDB 3e5d chain A Region: 5 - 127 Aligned: 123 Modelled: 122 Confidence: 99.8% Identity: 14% PDB header:lyase Chain: A: PDB Molecule:putative glyoxalase i; PDBTitle: crystal structure of a putative glyoxalase i (lmof2365_0426) from2 listeria monocytogenes str. 4b f2365 at 2.70 a resolution Phyre2 PDB 3zw5 chain A Region: 2 - 128 Aligned: 121 Modelled: 127 Confidence: 99.8% Identity: 18% PDB header:lyase Chain: A: PDB Molecule:glyoxalase domain-containing protein 5; PDBTitle: crystal structure of the human glyoxalase domain-containing2 protein 5 Phyre2 PDB 3ghj chain A Region: 4 - 128 Aligned: 115 Modelled: 125 Confidence: 99.8% Identity: 20% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative integron gene cassette protein; PDBTitle: crystal structure from the mobile metagenome of halifax2 harbour sewage outfall: integron cassette protein hfx_cass4 Phyre2 PDB 2r6u chain B Region: 2 - 128 Aligned: 120 Modelled: 127 Confidence: 99.8% Identity: 18% PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of gene product rha04853 from rhodococcus sp. rha1 Phyre2 1 c3l7tB_ 2 d1f9za_ 3 c2p25A_ 4 c3gm5A_ 5 d1zswa1 6 c1zswA_ 7 d2c21a1 8 d1qipa_ 9 c3ey7B_ 10 c3rmuD_ 11 c2qh0A_ 12 d1ss4a_ 13 c3huhA_ 14 c3oa4A_ 15 d1mpya2 16 d1jc4a_ 17 c3e5dA_ 18 c3zw5A_ 19 c3ghjA_ 20 c2r6uB_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3l7tB_ 99.9 43 PDB header:metal binding protein Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of smu.1112c 2 d1f9za_ 99.9 18 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Glyoxalase I (lactoylglutathione lyase) 3 c2p25A_ 99.9 43 PDB header:oxidoreductase Chain: A: PDB Molecule:glyoxalase family protein; PDBTitle: the crystal structure of the glyoxalase family protein from2 enterococcus faecalis 4 c3gm5A_ 99.9 20 PDB header:isomerase Chain: A: PDB Molecule:lactoylglutathione lyase and related lyases; PDBTitle: crystal structure of a putative methylmalonyl-coenzyme a2 epimerase from thermoanaerobacter tengcongensis at 2.0 a3 resolution 5 d1zswa1 99.9 21 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:BC1024-like 6 c1zswA_ 99.9 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:glyoxalase family protein; PDBTitle: crystal structure of bacillus cereus metallo protein from glyoxalase2 family 7 d2c21a1 99.9 21 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Glyoxalase I (lactoylglutathione lyase) 8 d1qipa_ 99.9 25 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Glyoxalase I (lactoylglutathione lyase) 9 c3ey7B_ 99.9 17 PDB header:oxidoreductase Chain: B: PDB Molecule:biphenyl-2,3-diol 1,2-dioxygenase iii-related PDBTitle: structure from the mobile metagenome of v. cholerae.2 integron cassette protein vch_cass1 10 c3rmuD_ 99.9 24 PDB header:isomerase Chain: D: PDB Molecule:methylmalonyl-coa epimerase, mitochondrial; PDBTitle: crystal structure of human methylmalonyl-coa epimerase, mcee 11 c2qh0A_ 99.9 15 PDB header:lyase Chain: A: PDB Molecule:lactoylglutathione lyase; PDBTitle: crystal structure of a glyoxalase from clostridium acetobutylicum 12 d1ss4a_ 99.9 21 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Hypothetical protein BC1747 13 c3huhA_ 99.9 17 PDB header:viral protein Chain: A: PDB Molecule:virulence protein stm3117; PDBTitle: the structure of biphenyl-2,3-diol 1,2-dioxygenase iii-2 related protein from salmonella typhimurium 14 c3oa4A_ 99.9 17 PDB header:lyase Chain: A: PDB Molecule:glyoxalase; PDBTitle: crystal structure of hypothetical protein bh1468 from bacillus2 halodurans c-125 15 d1mpya2 99.9 14 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 16 d1jc4a_ 99.8 18 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Methylmalonyl-CoA epimerase 17 c3e5dA_ 99.8 14 PDB header:lyase Chain: A: PDB Molecule:putative glyoxalase i; PDBTitle: crystal structure of a putative glyoxalase i (lmof2365_0426) from2 listeria monocytogenes str. 4b f2365 at 2.70 a resolution 18 c3zw5A_ 99.8 18 PDB header:lyase Chain: A: PDB Molecule:glyoxalase domain-containing protein 5; PDBTitle: crystal structure of the human glyoxalase domain-containing2 protein 5 19 c3ghjA_ 99.8 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative integron gene cassette protein; PDBTitle: crystal structure from the mobile metagenome of halifax2 harbour sewage outfall: integron cassette protein hfx_cass4 20 c2r6uB_ 99.8 18 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of gene product rha04853 from rhodococcus sp. rha1 21 d1lgta2 not modelled 99.8 17 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 22 d1twua_ not modelled 99.8 15 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Hypothetical protein YycE 23 c3bqxA_ not modelled 99.8 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:glyoxalase-related enzyme; PDBTitle: high resolution crystal structure of a glyoxalase-related enzyme from2 fulvimarina pelagi 24 c3bt3B_ not modelled 99.8 14 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:glyoxalase-related enzyme, arac type; PDBTitle: crystal structure of a glyoxalase-related enzyme from clostridium2 phytofermentans 25 d1zswa2 not modelled 99.8 12 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:BC1024-like 26 c3rriB_ not modelled 99.8 15 PDB header:metal binding protein Chain: B: PDB Molecule:glyoxalase/bleomycin resistance protein/dioxygenase; PDBTitle: crystal structure of glyoxalase/bleomycin resistance2 protein/dioxygenase from alicyclobacillus acidocaldarius 27 c2qqzB_ not modelled 99.8 17 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:glyoxalase family protein, putative; PDBTitle: crystal structure of putative glyoxalase family protein from bacillus2 anthracis 28 c2rk0B_ not modelled 99.8 19 PDB header:oxidoreductase Chain: B: PDB Molecule:glyoxalase/bleomycin resistance protein/dioxygenase domain; PDBTitle: crystal structure of glyoxylase/bleomycin resistance2 protein/dioxygenase domain from frankia sp. ean1pec 29 d2i7ra1 not modelled 99.8 17 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Antibiotic resistance proteins 30 c3oajA_ not modelled 99.8 22 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative ring-cleaving dioxygenase mhqo; PDBTitle: crystal structure of putative dioxygenase from bacillus subtilis2 subsp. subtilis str. 168 31 c3kolA_ not modelled 99.8 26 PDB header:metal binding protein Chain: A: PDB Molecule:glyoxalase/bleomycin resistance PDBTitle: crystal structure of a glyoxalase/dioxygenase from nostoc2 punctiforme 32 d1q0oa2 not modelled 99.8 13 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 33 d1npba_ not modelled 99.8 22 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Antibiotic resistance proteins 34 d1r9ca_ not modelled 99.8 14 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Antibiotic resistance proteins 35 c2p7pB_ not modelled 99.8 17 PDB header:metal binding protein, hydrolase Chain: B: PDB Molecule:glyoxalase family protein; PDBTitle: crystal structure of genomically encoded fosfomycin resistance2 protein, fosx, from listeria monocytogenes complexed with mn(ii) and3 sulfate ion 36 d1nkia_ not modelled 99.8 25 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Antibiotic resistance proteins 37 c3g12A_ not modelled 99.8 22 PDB header:lyase Chain: A: PDB Molecule:putative lactoylglutathione lyase; PDBTitle: crystal structure of a putative lactoylglutathione lyase2 from bdellovibrio bacteriovorus 38 c3r4qB_ not modelled 99.8 17 PDB header:lyase Chain: B: PDB Molecule:lactoylglutathione lyase; PDBTitle: crystal structure of lactoylglutathione lyase from agrobacterium2 tumefaciens 39 c3pkwA_ not modelled 99.8 16 PDB header:lyase Chain: A: PDB Molecule:toxoflavin lyase (tfla); PDBTitle: crystal structure of toxoflavin lyase (tfla) bound to mn(ii) 40 d1mpya1 not modelled 99.8 16 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 41 d1t47a1 not modelled 99.8 16 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 42 d1sp8a1 not modelled 99.8 22 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 43 c3ct8A_ not modelled 99.8 18 PDB header:lyase Chain: A: PDB Molecule:putative glyoxalase; PDBTitle: crystal structure of a putative glyoxalase (np_243026.1) from bacillus2 halodurans at 2.10 a resolution 44 d1kw3b2 not modelled 99.8 24 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 45 c3itwA_ not modelled 99.8 14 PDB header:peptide binding protein Chain: A: PDB Molecule:protein tiox; PDBTitle: crystal structure of tiox from micromonospora sp. ml1 46 d1lgta1 not modelled 99.8 15 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 47 d1f1ua1 not modelled 99.8 22 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 48 d1kw3b1 not modelled 99.8 14 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 49 c2rbbB_ not modelled 99.8 11 PDB header:oxidoreductase Chain: B: PDB Molecule:glyoxalase/bleomycin resistance protein/dioxygenase; PDBTitle: crystal structure of a glyoxalase/bleomycin resistance2 protein/dioxygenase family enzyme from burkholderia phytofirmans psjn 50 d1sp9a_ not modelled 99.8 13 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 51 d1klla_ not modelled 99.8 18 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Antibiotic resistance proteins 52 d1sqda1 not modelled 99.8 16 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 53 d1f1xa1 not modelled 99.8 21 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 54 d1f1ua2 not modelled 99.8 13 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 55 c3r6aB_ not modelled 99.8 15 PDB header:isomerase, lyase Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an uncharacterized protein (hypothetical protein2 mm_3218) from methanosarcina mazei. 56 c2kjzA_ not modelled 99.8 14 PDB header:unknown function Chain: A: PDB Molecule:atc0852; PDBTitle: solution nmr structure of protein atc0852 from agrobacterium2 tumefaciens. northeast structural genomics consortium (nesg) target3 att2. 57 c2wl9A_ not modelled 99.8 14 PDB header:oxidoreductase Chain: A: PDB Molecule:catechol 2,3-dioxygenase; PDBTitle: crystal structure of catechol 2,3-dioxygenase 58 c3hpyD_ not modelled 99.8 21 PDB header:oxidoreductase Chain: D: PDB Molecule:catechol 2,3-dioxygenase; PDBTitle: crystal structure analysis of the 2,3-dioxygenase lapb from2 pseudomonas in the complex with 4-methylcatechol 59 c3m2oB_ not modelled 99.8 23 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:glyoxalase/bleomycin resistance protein; PDBTitle: crystal structure of a putative glyoxalase/bleomycin resistance2 protein from rhodopseudomonas palustris cga009 60 c3lm4C_ not modelled 99.8 19 PDB header:oxidoreductase Chain: C: PDB Molecule:catechol 2,3-dioxygenase; PDBTitle: crystal structure of 2,3-dihydroxy biphenyl dioxygenase from2 rhodococcus sp. (strain rha1) 61 c3b59A_ not modelled 99.8 19 PDB header:lyase Chain: A: PDB Molecule:glyoxalase/bleomycin resistance protein/dioxygenase; PDBTitle: crystal structure of the mn(ii)-bound glyoxalase from novosphingobium2 aromaticivorans 62 d1f1xa2 not modelled 99.7 13 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 63 d1sqia1 not modelled 99.7 15 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 64 d1xqaa_ not modelled 99.7 14 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Antibiotic resistance proteins 65 c1mpyD_ not modelled 99.7 19 PDB header:oxidoreductase Chain: D: PDB Molecule:catechol 2,3-dioxygenase; PDBTitle: structure of catechol 2,3-dioxygenase (metapyrocatechase)2 from pseudomonas putida mt-2 66 c3rheA_ not modelled 99.7 12 PDB header:oxidoreductase Chain: A: PDB Molecule:nad-dependent benzaldehyde dehydrogenase; PDBTitle: the crystal structure of nad-dependent benzaldehyde dehydrogenase from2 legionella pneumophila 67 c1f1uB_ not modelled 99.7 22 PDB header:oxidoreductase Chain: B: PDB Molecule:homoprotocatechuate 2,3-dioxygenase; PDBTitle: crystal structure of homoprotocatechuate 2,3-dioxygenase from2 arthrobacter globiformis (native, low temperature) 68 c2zi8A_ not modelled 99.7 20 PDB header:oxidoreductase Chain: A: PDB Molecule:probable biphenyl-2,3-diol 1,2-dioxygenase bphc; PDBTitle: crystal structure of the hsac extradiol dioxygenase from m.2 tuberculosis in complex with 3,4-dihydroxy-9,10-3 seconandrost-1,3,5(10)-triene-9,17-dione (dhsa) 69 c1knfA_ not modelled 99.7 18 PDB header:oxidoreductase Chain: A: PDB Molecule:2,3-dihydroxybiphenyl 1,2-dioxygenase; PDBTitle: crystal structure of 2,3-dihydroxybiphenyl 1,2-dioxygenase complexed2 with 3-methyl catechol under anaerobic condition 70 c1tfzA_ not modelled 99.7 14 PDB header:oxidoreductase Chain: A: PDB Molecule:4-hydroxyphenylpyruvate dioxygenase; PDBTitle: structural basis for herbicidal inhibitor selectivity revealed by2 comparison of crystal structures of plant and mammalian 4-3 hydroxyphenylpyruvate dioxygenases 71 c1t47A_ not modelled 99.7 16 PDB header:oxidoreductase Chain: A: PDB Molecule:4-hydroxyphenylpyruvate dioxygenase; PDBTitle: structure of fe2-hppd bound to ntbc 72 c2ei2A_ not modelled 99.7 17 PDB header:oxidoreductase Chain: A: PDB Molecule:1,2-dihydroxynaphthalene dioxygenase; PDBTitle: crystal structure analysis of the 1,2-dihydroxynaphthalene dioxygenase2 from pseudomonas sp. stain c18 73 c1kw3B_ not modelled 99.7 17 PDB header:oxidoreductase Chain: B: PDB Molecule:2,3-dihydroxybiphenyl dioxygenase; PDBTitle: crystal structure of 2,3-dihydroxybiphenyal dioxygenase (bphc) at 1.452 a resolution 74 c3ecjC_ not modelled 99.7 21 PDB header:oxidoreductase Chain: C: PDB Molecule:protein (homoprotocatechuate 2,3-dioxygenase); PDBTitle: structure of e323l mutant of homoprotocatechuate 2,3-dioxygenase from2 brevibacterium fuscum at 1.65a resolution 75 d2pjsa1 not modelled 99.7 19 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Antibiotic resistance proteins 76 c1sp8A_ not modelled 99.7 14 PDB header:oxidoreductase Chain: A: PDB Molecule:4-hydroxyphenylpyruvate dioxygenase; PDBTitle: 4-hydroxyphenylpyruvate dioxygenase 77 c2rk9B_ not modelled 99.7 19 PDB header:oxidoreductase Chain: B: PDB Molecule:glyoxalase/bleomycin resistance protein/dioxygenase; PDBTitle: the crystal structure of a glyoxalase/bleomycin resistance2 protein/dioxygenase superfamily member from vibrio splendidus 12b01 78 c2q48A_ not modelled 99.7 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein at5g48480; PDBTitle: ensemble refinement of the protein crystal structure of gene product2 from arabidopsis thaliana at5g48480 79 c3sk1C_ not modelled 99.7 13 PDB header:griseoluteate-binding protein Chain: C: PDB Molecule:ehpr; PDBTitle: crystal structure of phenazine resistance protein ehpr from2 enterobacter agglomerans (erwinia herbicola, pantoea agglomerans)3 eh1087, apo form 80 d1xy7a_ not modelled 99.7 14 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Hypothetical protein At5g48480 81 c2qntA_ not modelled 99.6 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu1872; PDBTitle: crystal structure of protein of unknown function from agrobacterium2 tumefaciens str. c58 82 c2zw7A_ not modelled 99.6 11 PDB header:transferase Chain: A: PDB Molecule:bleomycin acetyltransferase; PDBTitle: crystal structure of bleomycin n-acetyltransferase complexed2 with bleomycin a2 and coenzyme a 83 d1jifa_ not modelled 99.6 17 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Antibiotic resistance proteins 84 d1t47a2 not modelled 99.6 17 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 85 c3fcdB_ not modelled 99.6 17 PDB header:lyase Chain: B: PDB Molecule:lyase; PDBTitle: crystal structure of a putative glyoxalase from an2 environmental bacteria 86 c1sqiA_ not modelled 99.6 19 PDB header:biosynthetic protein Chain: A: PDB Molecule:4-hydroxyphenylpyruvic acid dioxygenase; PDBTitle: structural basis for inhibitor selectivity revealed by2 crystal structures of plant and mammalian 4-3 hydroxyphenylpyruvate dioxygenases 87 c1cjxC_ not modelled 99.6 15 PDB header:oxidoreductase Chain: C: PDB Molecule:4-hydroxyphenylpyruvate dioxygenase; PDBTitle: crystal structure of pseudomonas fluorescens hppd 88 d1ecsa_ not modelled 99.6 20 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Antibiotic resistance proteins 89 c2r5vA_ not modelled 99.6 10 PDB header:oxidoreductase Chain: A: PDB Molecule:pcza361.1; PDBTitle: hydroxymandelate synthase crystal structure 90 d1cjxa2 not modelled 99.5 19 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 91 d1cjxa1 not modelled 99.5 16 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 92 d1sqia2 not modelled 99.5 16 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 93 d1xrka_ not modelled 99.4 16 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Antibiotic resistance proteins 94 d1sp8a2 not modelled 99.4 17 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 95 c3l20A_ not modelled 99.4 17 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of a hypothetical protein from staphylococcus aureus 96 d1u6la_ not modelled 99.4 13 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:3-demethylubiquinone-9 3-methyltransferase 97 d1sqda2 not modelled 99.3 13 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 98 c3e0rC_ not modelled 99.3 11 PDB header:hydrolase Chain: C: PDB Molecule:c3-degrading proteinase (cppa protein); PDBTitle: crystal structure of cppa protein from streptococcus pneumoniae tigr4 99 d1u7ia_ not modelled 99.2 14 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:3-demethylubiquinone-9 3-methyltransferase 100 c3omsA_ not modelled 99.2 11 PDB header:transferase Chain: A: PDB Molecule:phnb protein; PDBTitle: putative 3-demethylubiquinone-9 3-methyltransferase, phnb protein,2 from bacillus cereus. 101 d1tsja_ not modelled 98.5 12 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:3-demethylubiquinone-9 3-methyltransferase 102 d1u69a_ not modelled 97.0 8 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:3-demethylubiquinone-9 3-methyltransferase 103 c3opyH_ not modelled 95.9 16 PDB header:transferase Chain: H: PDB Molecule:6-phosphofructo-1-kinase beta-subunit; PDBTitle: crystal structure of pichia pastoris phosphofructokinase in the t-2 state 104 c3opyB_ not modelled 95.9 16 PDB header:transferase Chain: B: PDB Molecule:6-phosphofructo-1-kinase beta-subunit; PDBTitle: crystal structure of pichia pastoris phosphofructokinase in the t-2 state 105 c3opyE_ not modelled 93.1 22 PDB header:transferase Chain: E: PDB Molecule:6-phosphofructo-1-kinase alpha-subunit; PDBTitle: crystal structure of pichia pastoris phosphofructokinase in the t-2 state 106 d2g3aa1 not modelled 53.6 14 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 107 d1y9wa1 not modelled 43.2 14 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 108 d3etja1 not modelled 40.5 22 Fold:Barrel-sandwich hybrid Superfamily:Rudiment single hybrid motif Family:BC C-terminal domain-like 109 c3efaA_ not modelled 26.3 17 PDB header:transferase Chain: A: PDB Molecule:putative acetyltransferase; PDBTitle: crystal structure of putative n-acetyltransferase from lactobacillus2 plantarum 110 c3kifD_ not modelled 23.0 15 PDB header:sugar binding protein Chain: D: PDB Molecule:5-bladed -propeller lectin; PDBTitle: the crystal structures of two fragments truncated from 5-bladed -2 propeller lectin, tachylectin-2 (lib1-b7-18 and lib2-d2-15)

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0