Email l.a.kelley@imperial.ac.uk Description P23839 Date Thu Jan 5 11:39:44 GMT 2012 Unique Job ID af7bf31319ee3ded

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1nt2b_ 35.9 22 Fold:Nop domain Superfamily:Nop domain Family:Nop domain 2 c1junB_ 26.9 26 PDB header:transcription regulation Chain: B: PDB Molecule:c-jun homodimer; PDBTitle: nmr study of c-jun homodimer 3 d1vcsa1 25.4 14 Fold:STAT-like Superfamily:t-snare proteins Family:t-snare proteins 4 d2gtsa1 24.9 22 Fold:Ferritin-like Superfamily:HP0062-like Family:HP0062-like 5 c2xzmI_ 24.5 12 PDB header:ribosome Chain: I: PDB Molecule:rps16e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1 6 c3n4xB_ 23.7 17 PDB header:replication Chain: B: PDB Molecule:monopolin complex subunit csm1; PDBTitle: structure of csm1 full-length 7 c3swfA_ 22.9 16 PDB header:transport protein Chain: A: PDB Molecule:cgmp-gated cation channel alpha-1; PDBTitle: cnga1 621-690 containing clz domain 8 d1lvfa_ 22.7 15 Fold:STAT-like Superfamily:t-snare proteins Family:t-snare proteins 9 c2f3yB_ 18.1 40 PDB header:metal binding protein Chain: B: PDB Molecule:voltage-dependent l-type calcium channel alpha- PDBTitle: calmodulin/iq domain complex 10 c1t3jA_ 17.1 13 PDB header:membrane protein Chain: A: PDB Molecule:mitofusin 1; PDBTitle: mitofusin domain hr2 v686m/i708m mutant 11 d1wmib1 13.9 35 Fold:Non-globular all-alpha subunits of globular proteins Superfamily:RelB-like Family:RelB-like 12 c2rpaA_ 13.7 11 PDB header:hydrolase Chain: A: PDB Molecule:katanin p60 atpase-containing subunit a1; PDBTitle: the solution structure of n-terminal domain of microtubule severing2 enzyme 13 c3onjA_ 13.5 13 PDB header:protein transport Chain: A: PDB Molecule:t-snare vti1; PDBTitle: crystal structure of yeast vti1p_habc domain 14 d1wgda_ 12.7 13 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 15 d3saka_ 12.0 57 Fold:p53 tetramerization domain Superfamily:p53 tetramerization domain Family:p53 tetramerization domain 16 c3q9dB_ 11.9 30 PDB header:unknown function Chain: B: PDB Molecule:protein cpn_0803/cp_1068/cpj0803/cpb0832; PDBTitle: crystal structure of cpn0803 from c. pneumoniae. 17 c3n1bA_ 11.7 9 PDB header:transport protein Chain: A: PDB Molecule:vacuolar protein sorting-associated protein 54; PDBTitle: c-terminal domain of vps54 subunit of the garp complex 18 c2vayB_ 10.4 40 PDB header:metal transport Chain: B: PDB Molecule:voltage-dependent l-type calcium channel subunit PDBTitle: calmodulin complexed with cav1.1 iq peptide 19 c3f42A_ 10.1 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein hp0035; PDBTitle: crystal structure of uncharacterized protein hp0035 from helicobacter2 pylori 20 d1a9xb1 9.8 80 Fold:The "swivelling" beta/beta/alpha domain Superfamily:Carbamoyl phosphate synthetase, small subunit N-terminal domain Family:Carbamoyl phosphate synthetase, small subunit N-terminal domain 21 c2jroA_ not modelled 9.2 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of so0334 from shewanella oneidensis. northeast2 structural genomics target sor75 22 d2elba1 not modelled 9.1 12 Fold:BAR/IMD domain-like Superfamily:BAR/IMD domain-like Family:BAR domain 23 c2j11D_ not modelled 8.9 57 PDB header:transcription Chain: D: PDB Molecule:cellular tumor antigen p53; PDBTitle: p53 tetramerization domain mutant y327s t329g q331g 24 c1gngX_ not modelled 8.8 35 PDB header:transferase Chain: X: PDB Molecule:frattide; PDBTitle: glycogen synthase kinase-3 beta (gsk3) complex with frattide2 peptide 25 c3r2cJ_ not modelled 8.7 21 PDB header:transcription/rna Chain: J: PDB Molecule:30s ribosomal protein s10; PDBTitle: crystal structure of antitermination factors nusb and nuse in complex2 with boxa rna 26 c2ywfA_ not modelled 8.4 17 PDB header:translation Chain: A: PDB Molecule:gtp-binding protein lepa; PDBTitle: crystal structure of gmppnp-bound lepa from aquifex aeolicus 27 d1aiea_ not modelled 8.1 57 Fold:p53 tetramerization domain Superfamily:p53 tetramerization domain Family:p53 tetramerization domain 28 c1mpgB_ not modelled 7.9 26 PDB header:hydrolase Chain: B: PDB Molecule:3-methyladenine dna glycosylase ii; PDBTitle: 3-methyladenine dna glycosylase ii from escherichia coli 29 d1we3a2 not modelled 7.9 18 Fold:The "swivelling" beta/beta/alpha domain Superfamily:GroEL apical domain-like Family:GroEL-like chaperone, apical domain 30 c2j10D_ not modelled 7.7 57 PDB header:transcription Chain: D: PDB Molecule:cellular tumor antigen p53; PDBTitle: p53 tetramerization domain mutant t329f q331k 31 c2j10B_ not modelled 7.7 57 PDB header:transcription Chain: B: PDB Molecule:cellular tumor antigen p53; PDBTitle: p53 tetramerization domain mutant t329f q331k 32 c2j10A_ not modelled 7.7 57 PDB header:transcription Chain: A: PDB Molecule:cellular tumor antigen p53; PDBTitle: p53 tetramerization domain mutant t329f q331k 33 d3bypa1 not modelled 7.5 15 Fold:Alpha-lytic protease prodomain-like Superfamily:Cation efflux protein cytoplasmic domain-like Family:Cation efflux protein cytoplasmic domain-like 34 c2zkqi_ not modelled 7.5 22 PDB header:ribosomal protein/rna Chain: I: PDB Molecule: PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 35 c4a4kI_ not modelled 7.5 12 PDB header:hydrolase Chain: I: PDB Molecule:antiviral helicase ski2; PDBTitle: crystal structure of the s. cerevisiae ski2 insertion domain 36 d1jjcb2 not modelled 7.5 33 Fold:Putative DNA-binding domain Superfamily:Putative DNA-binding domain Family:Domains B1 and B5 of PheRS-beta, PheT 37 c3n6sA_ not modelled 7.5 24 PDB header:transcription, replication/dna Chain: A: PDB Molecule:transcription termination factor, mitochondrial; PDBTitle: crystal structure of human mitochondrial mterf in complex with a 15-2 mer dna encompassing the trnaleu(uur) binding sequence 38 c1keeH_ not modelled 7.4 80 PDB header:ligase Chain: H: PDB Molecule:carbamoyl-phosphate synthetase small chain; PDBTitle: inactivation of the amidotransferase activity of carbamoyl phosphate2 synthetase by the antibiotic acivicin 39 d1z1va1 not modelled 7.4 50 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 40 d1g3nc2 not modelled 7.2 50 Fold:Cyclin-like Superfamily:Cyclin-like Family:Cyclin 41 c2it3B_ not modelled 7.2 15 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:upf0130 protein ph1069; PDBTitle: structure of ph1069 protein from pyrococcus horikoshii 42 c3eabK_ not modelled 7.1 31 PDB header:cell cycle Chain: K: PDB Molecule:chmp1b; PDBTitle: crystal structure of spastin mit in complex with escrt iii 43 c1lj2C_ not modelled 7.0 50 PDB header:viral protein/ translation Chain: C: PDB Molecule:eukaryotic protein synthesis initiation factor; PDBTitle: recognition of eif4g by rotavirus nsp3 reveals a basis for2 mrna circularization 44 c2kdbA_ not modelled 6.9 13 PDB header:protein binding Chain: A: PDB Molecule:homocysteine-responsive endoplasmic reticulum- PDBTitle: solution structure of human ubiquitin-like domain of2 herpud2_9_85, northeast structural genomics consortium3 (nesg) target ht53a 45 d1k1fa_ not modelled 6.8 22 Fold:Bcr-Abl oncoprotein oligomerization domain Superfamily:Bcr-Abl oncoprotein oligomerization domain Family:Bcr-Abl oncoprotein oligomerization domain 46 c3n5aA_ not modelled 6.8 31 PDB header:protein transport Chain: A: PDB Molecule:synaptotagmin-7; PDBTitle: synaptotagmin-7, c2b-domain, calcium bound 47 c3kizA_ not modelled 6.7 16 PDB header:ligase Chain: A: PDB Molecule:phosphoribosylformylglycinamidine cyclo-ligase; PDBTitle: crystal structure of putative phosphoribosylformylglycinamidine cyclo-2 ligase (yp_676759.1) from cytophaga hutchinsonii atcc 33406 at 1.50 a3 resolution 48 d1kida_ not modelled 6.7 19 Fold:The "swivelling" beta/beta/alpha domain Superfamily:GroEL apical domain-like Family:GroEL-like chaperone, apical domain 49 d1sjpa2 not modelled 6.7 19 Fold:The "swivelling" beta/beta/alpha domain Superfamily:GroEL apical domain-like Family:GroEL-like chaperone, apical domain 50 c3p8cD_ not modelled 6.6 10 PDB header:protein binding Chain: D: PDB Molecule:wiskott-aldrich syndrome protein family member 1; PDBTitle: structure and control of the actin regulatory wave complex 51 c1lj2D_ not modelled 6.6 50 PDB header:viral protein/ translation Chain: D: PDB Molecule:eukaryotic protein synthesis initiation factor; PDBTitle: recognition of eif4g by rotavirus nsp3 reveals a basis for2 mrna circularization 52 c2elxA_ not modelled 6.6 44 PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 406; PDBTitle: solution structure of the 8th c2h2 zinc finger of mouse2 zinc finger protein 406 53 d2oufa1 not modelled 6.4 18 Fold:HP0242-like Superfamily:HP0242-like Family:HP0242-like 54 c3ks7D_ not modelled 6.4 22 PDB header:hydrolase Chain: D: PDB Molecule:putative putative pngase f; PDBTitle: crystal structure of putative peptide:n-glycosidase f (pngase f)2 (yp_210507.1) from bacteroides fragilis nctc 9343 at 2.30 a3 resolution 55 d1g73a_ not modelled 6.4 14 Fold:Spectrin repeat-like Superfamily:Smac/diablo Family:Smac/diablo 56 d1igqa_ not modelled 6.1 14 Fold:SH3-like barrel Superfamily:C-terminal domain of transcriptional repressors Family:Transcriptional repressor protein KorB 57 d3efza1 not modelled 6.1 8 Fold:alpha-alpha superhelix Superfamily:14-3-3 protein Family:14-3-3 protein 58 c3efzA_ not modelled 6.1 8 PDB header:signaling protein Chain: A: PDB Molecule:14-3-3 protein; PDBTitle: crystal structure of a 14-3-3 protein from cryptosporidium parvum2 (cgd1_2980) 59 c3swyB_ not modelled 6.0 12 PDB header:transport protein Chain: B: PDB Molecule:cyclic nucleotide-gated cation channel alpha-3; PDBTitle: cnga3 626-672 containing clz domain 60 c3c19A_ not modelled 6.0 6 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein mk0293; PDBTitle: crystal structure of protein mk0293 from methanopyrus kandleri av19 61 c1gw4A_ not modelled 6.0 31 PDB header:high density lipoproteins Chain: A: PDB Molecule:apoa-i; PDBTitle: the helix-hinge-helix structural motif in human2 apolipoprotein a-i determined by nmr spectroscopy, 13 structure 62 d1dula_ not modelled 6.0 50 Fold:Signal peptide-binding domain Superfamily:Signal peptide-binding domain Family:Signal peptide-binding domain 63 d1igub_ not modelled 5.9 14 Fold:SH3-like barrel Superfamily:C-terminal domain of transcriptional repressors Family:Transcriptional repressor protein KorB 64 d1fewa_ not modelled 5.8 14 Fold:Spectrin repeat-like Superfamily:Smac/diablo Family:Smac/diablo 65 c1zvaA_ not modelled 5.8 13 PDB header:viral protein Chain: A: PDB Molecule:e2 glycoprotein; PDBTitle: a structure-based mechanism of sars virus membrane fusion 66 c1jqmA_ not modelled 5.8 5 PDB header:ribosome Chain: A: PDB Molecule:50s ribosomal protein l11; PDBTitle: fitting of l11 protein and elongation factor g (ef-g) in2 the cryo-em map of e. coli 70s ribosome bound with ef-g,3 gdp and fusidic acid 67 c1rrqA_ not modelled 5.8 26 PDB header:hydrolase/dna Chain: A: PDB Molecule:muty; PDBTitle: muty adenine glycosylase in complex with dna containing an2 a:oxog pair 68 d1ip9a_ not modelled 5.8 14 Fold:beta-Grasp (ubiquitin-like) Superfamily:CAD & PB1 domains Family:PB1 domain 69 d1orja_ not modelled 5.8 14 Fold:Four-helical up-and-down bundle Superfamily:Flagellar export chaperone FliS Family:Flagellar export chaperone FliS 70 c3bboK_ not modelled 5.7 13 PDB header:ribosome Chain: K: PDB Molecule:ribosomal protein l11; PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome 71 c3degC_ not modelled 5.7 17 PDB header:ribosome Chain: C: PDB Molecule:gtp-binding protein lepa; PDBTitle: complex of elongating escherichia coli 70s ribosome and ef4(lepa)-2 gmppnp 72 c3cb4D_ not modelled 5.6 17 PDB header:translation Chain: D: PDB Molecule:gtp-binding protein lepa; PDBTitle: the crystal structure of lepa 73 d1a1ua_ not modelled 5.3 57 Fold:p53 tetramerization domain Superfamily:p53 tetramerization domain Family:p53 tetramerization domain 74 d1dfca1 not modelled 5.3 56 Fold:beta-Trefoil Superfamily:Actin-crosslinking proteins Family:Fascin 75 c2v8sV_ not modelled 5.2 11 PDB header:protein transport Chain: V: PDB Molecule:vesicle transport through interaction with PDBTitle: vti1b habc domain - epsinr enth domain complex 76 c2be6F_ not modelled 5.2 40 PDB header:membrane protein Chain: F: PDB Molecule:voltage-dependent l-type calcium channel alpha-1c subunit; PDBTitle: 2.0 a crystal structure of the cav1.2 iq domain-ca/cam complex 77 d1js8a2 not modelled 5.2 5 Fold:C-terminal domain of mollusc hemocyanin Superfamily:C-terminal domain of mollusc hemocyanin Family:C-terminal domain of mollusc hemocyanin 78 c1bf5A_ not modelled 5.2 16 PDB header:gene regulation/dna Chain: A: PDB Molecule:signal transducer and activator of transcription PDBTitle: tyrosine phosphorylated stat-1/dna complex 79 c3okqA_ not modelled 5.1 21 PDB header:protein binding Chain: A: PDB Molecule:bud site selection protein 6; PDBTitle: crystal structure of a core domain of yeast actin nucleation cofactor2 bud6