Email l.a.kelley@imperial.ac.uk Description P76498 Date Thu Jan 5 12:23:34 GMT 2012 Unique Job ID aec17e4e8f8d947f

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1aqta2 37.3 21 Fold:Epsilon subunit of F1F0-ATP synthase N-terminal domain Superfamily:Epsilon subunit of F1F0-ATP synthase N-terminal domain Family:Epsilon subunit of F1F0-ATP synthase N-terminal domain 2 c1s3rA_ 35.3 27 PDB header:toxin Chain: A: PDB Molecule:intermedilysin; PDBTitle: crystal structure of the human-specific toxin intermedilysin 3 c1pfoA_ 33.1 20 PDB header:toxin Chain: A: PDB Molecule:perfringolysin o; PDBTitle: perfringolysin o 4 d1pfoa_ 33.1 20 Fold:Perfringolysin Superfamily:Perfringolysin Family:Perfringolysin 5 c1fs0E_ 30.3 13 PDB header:hydrolase Chain: E: PDB Molecule:atp synthase epsilon subunit; PDBTitle: complex of gamma/epsilon atp synthase from e.coli 6 c2rq7A_ 29.8 7 PDB header:hydrolase Chain: A: PDB Molecule:atp synthase epsilon chain; PDBTitle: solution structure of the epsilon subunit chimera combining2 the n-terminal beta-sandwich domain from t. elongatus bp-13 f1 and the c-terminal alpha-helical domain from spinach4 chloroplast f1 7 d2p02a3 29.2 30 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 8 d1g94a1 28.2 20 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain 9 d1qm4a3 27.6 30 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 10 d3dhpa1 27.2 24 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain 11 c3b5wE_ 25.2 19 PDB header:membrane protein Chain: E: PDB Molecule:lipid a export atp-binding/permease protein msba; PDBTitle: crystal structure of eschericia coli msba 12 c2xu8B_ 22.5 27 PDB header:structural genomics Chain: B: PDB Molecule:pa1645; PDBTitle: structure of pa1645 13 d2e74d1 22.5 23 Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP) 14 c3so4C_ 21.0 27 PDB header:transferase Chain: C: PDB Molecule:methionine-adenosyltransferase; PDBTitle: methionine-adenosyltransferase from entamoeba histolytica 15 c3hvnA_ 20.2 20 PDB header:toxin Chain: A: PDB Molecule:hemolysin; PDBTitle: crystal structure of cytotoxin protein suilysin from2 streptococcus suis 16 c2e5yA_ 19.9 18 PDB header:hydrolase Chain: A: PDB Molecule:atp synthase epsilon chain; PDBTitle: epsilon subunit and atp complex of f1f0-atp synthase from2 the thermophilic bacillus ps3 17 d1v58a2 19.8 44 Fold:Cystatin-like Superfamily:DsbC/DsbG N-terminal domain-like Family:DsbC/DsbG N-terminal domain-like 18 c2obvA_ 19.7 30 PDB header:transferase Chain: A: PDB Molecule:s-adenosylmethionine synthetase isoform type-1; PDBTitle: crystal structure of the human s-adenosylmethionine synthetase 1 in2 complex with the product 19 c1rg9D_ 19.2 34 PDB header:transferase Chain: D: PDB Molecule:s-adenosylmethionine synthetase; PDBTitle: s-adenosylmethionine synthetase complexed with sam and ppnp 20 c3imlB_ 18.9 24 PDB header:transferase Chain: B: PDB Molecule:s-adenosylmethionine synthetase; PDBTitle: crystal structure of s-adenosylmethionine synthetase from burkholderia2 pseudomallei 21 c3rv2B_ not modelled 17.6 27 PDB header:transferase Chain: B: PDB Molecule:s-adenosylmethionine synthase; PDBTitle: crystal structure of s-adenosylmethionine synthetase from2 mycobacterium marinum 22 c2wanA_ not modelled 16.2 25 PDB header:hydrolase Chain: A: PDB Molecule:pullulanase; PDBTitle: pullulanase from bacillus acidopullulyticus 23 c2l92A_ not modelled 13.6 50 PDB header:dna binding protein Chain: A: PDB Molecule:histone family protein nucleoid-structuring protein h-ns; PDBTitle: solution structure of the c-terminal domain of h-ns like protein bv3f 24 c1h8eH_ not modelled 13.3 14 PDB header:hydrolase Chain: H: PDB Molecule:bovine mitochondrial f1-atpase; PDBTitle: (adp.alf4)2(adp.so4) bovine f1-atpase2 (all three catalytic sites occupied) 25 c3ebeA_ not modelled 11.8 24 PDB header:replication Chain: A: PDB Molecule:protein mcm10 homolog; PDBTitle: crystal structure of xenopus laevis replication initiation factor2 mcm10 internal domain 26 d2j07a1 not modelled 11.8 23 Fold:Cryptochrome/photolyase FAD-binding domain Superfamily:Cryptochrome/photolyase FAD-binding domain Family:Cryptochrome/photolyase FAD-binding domain 27 d1ig4a_ not modelled 10.6 50 Fold:DNA-binding domain Superfamily:DNA-binding domain Family:Methyl-CpG-binding domain, MBD 28 d1e6vb2 not modelled 10.5 18 Fold:Ferredoxin-like Superfamily:Methyl-coenzyme M reductase subunits Family:Methyl-coenzyme M reductase alpha and beta chain N-terminal domain 29 c2qe7H_ not modelled 10.3 27 PDB header:hydrolase Chain: H: PDB Molecule:atp synthase subunit epsilon; PDBTitle: crystal structure of the f1-atpase from the thermoalkaliphilic2 bacterium bacillus sp. ta2.a1 30 d1ik0a_ not modelled 9.9 35 Fold:4-helical cytokines Superfamily:4-helical cytokines Family:Short-chain cytokines 31 d1hbnb2 not modelled 9.4 45 Fold:Ferredoxin-like Superfamily:Methyl-coenzyme M reductase subunits Family:Methyl-coenzyme M reductase alpha and beta chain N-terminal domain 32 d1mxaa3 not modelled 9.2 30 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 33 d1jaea1 not modelled 9.1 26 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain 34 c1dvaY_ not modelled 8.9 40 PDB header:hydrolase/hydrolase inhibitor Chain: Y: PDB Molecule:peptide e-76; PDBTitle: crystal structure of the complex between the peptide exosite inhibitor2 e-76 and coagulation factor viia 35 c1dvaX_ not modelled 8.9 40 PDB header:hydrolase/hydrolase inhibitor Chain: X: PDB Molecule:peptide e-76; PDBTitle: crystal structure of the complex between the peptide exosite inhibitor2 e-76 and coagulation factor viia 36 d1r44a_ not modelled 8.8 20 Fold:Hedgehog/DD-peptidase Superfamily:Hedgehog/DD-peptidase Family:VanX-like 37 d2j2ja1 not modelled 8.6 33 Fold:Virus attachment protein globular domain Superfamily:Virus attachment protein globular domain Family:Adenovirus fiber protein "knob" domain 38 c2e76D_ not modelled 8.6 25 PDB header:photosynthesis Chain: D: PDB Molecule:cytochrome b6-f complex iron-sulfur subunit; PDBTitle: crystal structure of the cytochrome b6f complex with tridecyl-2 stigmatellin (tds) from m.laminosus 39 c3ideD_ not modelled 8.5 21 PDB header:virus like particle Chain: D: PDB Molecule:capsid protein vp2; PDBTitle: structure of ipnv subviral particle 40 c2df7H_ not modelled 8.5 43 PDB header:virus like particle Chain: H: PDB Molecule:structural polyprotein vp2; PDBTitle: crystal structure of infectious bursal disease virus vp2 subviral2 particle 41 c2wstE_ not modelled 8.4 50 PDB header:viral protein Chain: E: PDB Molecule:putative fiber protein; PDBTitle: head domain of porcine adenovirus type 4 nadc-1 isolate2 fibre 42 d2df7a1 not modelled 8.3 43 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:Positive stranded ssRNA viruses Family:Birnaviridae-like VP 43 c2rkcA_ not modelled 8.2 20 PDB header:viral protein Chain: A: PDB Molecule:hemagglutinin; PDBTitle: crystal structure of the measles virus hemagglutinin 44 c3m05A_ not modelled 8.0 29 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein pepe_1480; PDBTitle: the crystal structure of a functionally unknown protein2 pepe_1480 from pediococcus pentosaceus atcc 25745 45 c2ky8A_ not modelled 7.7 60 PDB header:transcription/dna Chain: A: PDB Molecule:methyl-cpg-binding domain protein 2; PDBTitle: solution structure and dynamic analysis of chicken mbd2 methyl binding2 domain bound to a target methylated dna sequence 46 d1v1ha1 not modelled 7.6 25 Fold:Triple beta-spiral Superfamily:Fibre shaft of virus attachment proteins Family:Adenovirus 47 c2yxhB_ not modelled 7.4 75 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:mazg-related protein; PDBTitle: crystal structure of mazg-related protein from thermotoga maritima 48 d1ua7a1 not modelled 7.4 17 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain 49 d1wi9a_ not modelled 7.4 24 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:PCI domain (PINT motif) 50 c3oqcB_ not modelled 7.3 25 PDB header:hydrolase Chain: B: PDB Molecule:ufm1-specific protease 2; PDBTitle: ubiquitin-fold modifier 1 specific protease, ufsp2 51 c1z8rA_ not modelled 7.3 34 PDB header:hydrolase Chain: A: PDB Molecule:coxsackievirus b4 polyprotein; PDBTitle: 2a cysteine proteinase from human coxsackievirus b4 (strain2 jvb / benschoten / new york / 51) 52 c2z84A_ not modelled 7.2 67 PDB header:hydrolase Chain: A: PDB Molecule:ufm1-specific protease 1; PDBTitle: insights from crystal and solution structures of mouse ufsp1 53 c3crcB_ not modelled 7.0 25 PDB header:hydrolase Chain: B: PDB Molecule:protein mazg; PDBTitle: crystal structure of escherichia coli mazg, the regulator2 of nutritional stress response 54 d2j4wd1 not modelled 6.7 80 Fold:Apical membrane antigen 1 Superfamily:Apical membrane antigen 1 Family:Apical membrane antigen 1 55 c2j4wD_ not modelled 6.7 80 PDB header:immune system Chain: D: PDB Molecule:apical membrane antigen 1; PDBTitle: structure of a plasmodium vivax apical membrane antigen 1-2 fab f8.12.19 complex 56 d2ysca1 not modelled 6.0 71 Fold:WW domain-like Superfamily:WW domain Family:WW domain 57 c2i5pO_ not modelled 5.9 21 PDB header:oxidoreductase Chain: O: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase 1; PDBTitle: crystal structure of glyceraldehyde-3-phosphate2 dehydrogenase isoform 1 from k. marxianus 58 c2l1qA_ not modelled 5.9 42 PDB header:antimicrobial protein Chain: A: PDB Molecule:liver-expressed antimicrobial peptide 2; PDBTitle: solution structure of human liver expressed antimicrobial peptide 2 59 c3obhA_ not modelled 5.9 28 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: x-ray crystal structure of protein sp_0782 (7-79) from streptococcus2 pneumoniae. northeast structural genomics consortium target spr104 60 c2pbdV_ not modelled 5.9 75 PDB header:structural protein Chain: V: PDB Molecule:vasodilator-stimulated phosphoprotein; PDBTitle: ternary complex of profilin-actin with the poly-pro-gab2 domain of vasp* 61 c2yyyB_ not modelled 5.9 23 PDB header:oxidoreductase Chain: B: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase; PDBTitle: crystal structure of glyceraldehyde-3-phosphate2 dehydrogenase 62 c2j5lA_ not modelled 5.7 100 PDB header:immune system Chain: A: PDB Molecule:apical membrane antigen 1; PDBTitle: structure of a plasmodium falciparum apical membrane2 antigen 1-fab f8.12.19 complex 63 d2j5la1 not modelled 5.7 100 Fold:Apical membrane antigen 1 Superfamily:Apical membrane antigen 1 Family:Apical membrane antigen 1 64 d1obfo2 not modelled 5.7 21 Fold:FwdE/GAPDH domain-like Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Family:GAPDH-like 65 d1rm4a2 not modelled 5.2 27 Fold:FwdE/GAPDH domain-like Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Family:GAPDH-like