Job Description P17411 Confidence 99.44% Date Thu Jan 5 11:36:08 GMT 2012 Rank 96 Aligned Residues 166 % Identity 15% Template d1civa2 SCOP info LDH C-terminal domain-like LDH C-terminal domain-like Lactate & malate dehydrogenases, C-terminal domain Resolution 2.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		M	L	K	D	S	D	D	L	S	I	D	L	F	G	L	N	H	M	V	F	I	K	D	V	L	I	N	G	K	S	R	F	A	E	L	L	D	G	V	A	S	G	Q	L	K	A	S	S	V	.	K	N	I	F	D	L	P	F	S	E	G	L	I	R	S	L	N	L	L	P	C	S	Y	L	L	Y	Y	F	K	Q
Query Conservation																																																			.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.																							.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.
Template Sequence		T	R	L	D	E	N	R	A	K	C	Q	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	A	G	V	F	Y	D	K	V	S	N	V	T	I	W	G	N	H	S	T	T	Q	V	P	D	F	L	N	A	K	I	H	G	I	P	V	T	.	.	.	.	.	.	.	.
Template Known Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	S		T	T	S								B		S	S	T	T						S	S				T	T			G	G	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.																						.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.			320	.	.	.	.	.	.	.	.	.	330			.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure																																																								.	.												.	.
Query SS confidence																																																								.	.												.	.
Query Sequence		K	E	M	L	A	I	E	M	G	E	Y	Y	K	G	G	A	R	A	Q	V	V	Q	K	V	E	K	Q	L	F	E	L	Y	K	N	P	E	L	K	V	K	P	K	E	L	E	Q	R	G	G	A	Y	Y	S	D	.	.	A	A	C	E	V	I	N	A	I	Y	N	.	.	D	K	Q	A	E	H	Y	V	N	I	P
Query Conservation																																																								.	.												.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.												.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	I	R	D	R	K	W	L	E	D	E	F	T	N	M	V	Q	T	R	G	G	V	L	I	K	K	W	G	R	S	S	A	A	S	T	A	V	S	I	V	D	A	I	R	S	L	V	T	P	T	P	E	G	D	W	F	S	T	G	V	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	S									T															S	T	T			S																	S	B			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	H	G	Q	I	D	N	I	P	A	D	W	A	V	E	M	T	C	K	L	G	R	D	G	A	T	P	H	P	R	I	T	H	F	D	D	K	V	M	G	L	I	H	T	I	K	G	F	E	I	A	A	S	N	A	A	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	N	G	N	P	Y	G	I	A	E	D	I	V	F	S	M	P	C	R	S	K	G	D	G	D	Y	E	F	V	K	D	V	I	F	D	D	Y	L	S	K	K	I	K	K	S	E	D	E	L	L	A	E	K	K	C	V	A	H
Template Known Secondary structure			T	T		S	S				S	S	S									B	S	S	S																																T
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions