96 d1civa2 Probab=99.44   E-value=9.7e-14  Score=109.32  Aligned_columns=166  Identities=15%

Q ss_pred             CCCCHHHEEEEEEEECHHHHHHHHHCCCEECCHHHHHHCCCCCCCCCCC-CCCCCCHHHHHHHHHHCCEECCCCHHHCCC
Q ss_conf             8998888588861000235554553058401168874201013442001-333545157899998288846531121365
Q batch____       187 MLKDSDDLSIDLFGLNHMVFIKDVLINGKSRFAELLDGVASGQLKASSV-KNIFDLPFSEGLIRSLNLLPCSYLLYYFKQ  265 (450)
Q Consensus       187 ~~~d~~~l~~~~aGlNH~~w~~~~~~~G~D~~p~l~~~i~~~~~~~~~~-~~~~d~~~~~~~~~~~g~~P~~yl~yy~~~  265 (450)
                      |.||+.|+++.++                     .+-.+.+.+++++++ |+||+++|+.|+...+++.|..        
T Consensus         1 T~LDs~R~~~~lA---------------------~~l~v~~~~V~~~vI~GeHGds~vp~~S~a~V~g~pi~--------   51 (192)
T d1civa2           1 TRLDENRAKCQLA---------------------LKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIHGIPVT--------   51 (192)
T ss_dssp             CHHHHHHHHHHHH---------------------HHHTSCTTSEECCEEEBCSSTTCEEECSSCEETTEEGG--------
T ss_pred             CHHHHHHHHHHHH---------------------HHHCCCHHHCEEEEEEEECCCCEEEEEEEEEECCEEHH--------
T ss_conf             9126999999999---------------------99489988805579757569942898754378879788--------


Q ss_pred             HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH--HHHHHHHHHHC--CCCEEEEEEEE
Q ss_conf             899874110014566206788767899999975220023420000136662279--99999999865--99728998621
Q batch____       266 KEMLAIEMGEYYKGGARAQVVQKVEKQLFELYKNPELKVKPKELEQRGGAYYSD--AACEVINAIYN--DKQAEHYVNIP  341 (450)
Q Consensus       266 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e--~a~~ii~ai~~--d~~~~~~vnv~  341 (450)
                                        +.+..-+....+........+......+.++++|+.  ++++++++|++  ++..+++++|.
T Consensus        52 ------------------~~i~d~~~~~~el~~~v~~~g~eIi~~k~~ss~~s~a~a~~~~~~ai~~~~~~~~~~s~sv~  113 (192)
T d1civa2          52 ------------------EVIRDRKWLEDEFTNMVQTRGGVLIKKWGRSSAASTAVSIVDAIRSLVTPTPEGDWFSTGVY  113 (192)
T ss_dssp             ------------------GTSCCHHHHHHTHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHSBCCTTCCEEEEEE
T ss_pred             ------------------HHCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
T ss_conf             ------------------75070333277899999842078996359851357999999999999716898858999998


Q ss_pred             CCCCCCCCCCCEEEEEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             3543588786519998888848877730647899989999999999999999999991
Q batch____       342 HHGQIDNIPADWAVEMTCKLGRDGATPHPRITHFDDKVMGLIHTIKGFEIAASNAALS  399 (450)
Q Consensus       342 N~G~i~~Lp~D~~VEVP~~v~~~Gi~p~~~ig~lP~~~~~L~~~~~~~e~l~veA~~~  399 (450)
                      .+|..+|+++|+++++||+++++|+..+.+--+|.+..+..++.....-+--.+++.+
T Consensus       114 ~~Ge~YGi~~~i~~s~Pvvlg~~Gv~~ive~l~L~~~e~ekl~~S~~~Lk~e~~~~~~  171 (192)
T d1civa2         114 TNGNPYGIAEDIVFSMPCRSKGDGDYEFVKDVIFDDYLSKKIKKSEDELLAEKKCVAH  171 (192)
T ss_dssp             CTTCSSCCCSSSEEEEEEECBSSSCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred             ECCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             5474478777719998699949940898479988889999999999999999999997