Email l.a.kelley@imperial.ac.uk Description P11865 Date Thu Jan 5 11:32:53 GMT 2012 Unique Job ID a57d615ed6f44897

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1tf5a1 39.8 16 Fold:Pre-protein crosslinking domain of SecA Superfamily:Pre-protein crosslinking domain of SecA Family:Pre-protein crosslinking domain of SecA 2 c2ccfA_ 35.1 63 PDB header:four helix bundle Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: antiparallel configuration of pli e20s 3 c2cceA_ 34.8 63 PDB header:four helix bundle Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: parallel configuration of pli e20s 4 c2cceB_ 34.8 63 PDB header:four helix bundle Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: parallel configuration of pli e20s 5 c1unyA_ 33.3 52 PDB header:four helix bundle Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 6 c2rjiB_ 32.6 33 PDB header:protein transport, cell invasion Chain: B: PDB Molecule:erythrocyte binding antigen 175; PDBTitle: malarial eba-175 region vi crystallographic structure2 reveals a kix-like binding interface 7 c1unzB_ 30.3 52 PDB header:four helix bundle Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 8 c1unzA_ 30.3 52 PDB header:four helix bundle Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 9 d1nkta1 29.0 19 Fold:Pre-protein crosslinking domain of SecA Superfamily:Pre-protein crosslinking domain of SecA Family:Pre-protein crosslinking domain of SecA 10 c1unvA_ 18.8 58 PDB header:four helix bundle Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 11 c1unvB_ 18.7 58 PDB header:four helix bundle Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 12 c1u9gA_ 18.7 58 PDB header:transcription Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: heterocyclic peptide backbone modification in gcn4-pli based coiled2 coils: replacement of k(8)l(9) 13 c1u9gB_ 18.7 58 PDB header:transcription Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: heterocyclic peptide backbone modification in gcn4-pli based coiled2 coils: replacement of k(8)l(9) 14 d2co7b2 15.7 22 Fold:C2 domain-like Superfamily:Periplasmic chaperone C-domain Family:Periplasmic chaperone C-domain 15 c1envA_ 15.3 46 PDB header:viral protein Chain: A: PDB Molecule:hiv-1 envelope protein chimera consisting of a fragment of PDBTitle: atomic structure of the ectodomain from hiv-1 gp41 16 c1gcmA_ 14.7 58 PDB header:transcription regulation Chain: A: PDB Molecule:gcn4p-ii; PDBTitle: gcn4 leucine zipper core mutant p-li 17 d1twfc1 14.6 50 Fold:DCoH-like Superfamily:RBP11-like subunits of RNA polymerase Family:RNA polymerase alpha subunit dimerisation domain 18 c2ag3A_ 14.5 50 PDB header:de novo protein Chain: A: PDB Molecule:gcn4-pli; PDBTitle: heterocyclic peptide backbone modification in gcn4-pli based coiled2 coils: substitution of the k(15)-l(16) amide with a triazole 19 c1gclA_ 14.4 58 PDB header:leucine zipper Chain: A: PDB Molecule:gcn4; PDBTitle: gcn4 leucine zipper core mutant p-li 20 c1gclB_ 14.4 58 PDB header:leucine zipper Chain: B: PDB Molecule:gcn4; PDBTitle: gcn4 leucine zipper core mutant p-li 21 c1gclC_ not modelled 14.4 58 PDB header:leucine zipper Chain: C: PDB Molecule:gcn4; PDBTitle: gcn4 leucine zipper core mutant p-li 22 c1gclD_ not modelled 14.4 58 PDB header:leucine zipper Chain: D: PDB Molecule:gcn4; PDBTitle: gcn4 leucine zipper core mutant p-li 23 c1w5iA_ not modelled 13.2 58 PDB header:four helix bundle Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: aba does not affect topology of pli. 24 c1uo2A_ not modelled 13.2 58 PDB header:four helix bundle Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 25 c1uo2B_ not modelled 12.4 58 PDB header:four helix bundle Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 26 c1w5iB_ not modelled 12.4 58 PDB header:four helix bundle Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: aba does not affect topology of pli. 27 c1unyB_ not modelled 12.2 61 PDB header:four helix bundle Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 28 c1uo1A_ not modelled 12.0 58 PDB header:four helix bundle Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 29 c1uo1B_ not modelled 12.0 58 PDB header:four helix bundle Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 30 c1uo0B_ not modelled 12.0 58 PDB header:four helix bundle Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 31 c1uo0A_ not modelled 12.0 58 PDB header:four helix bundle Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 32 d1hc1a2 not modelled 11.6 28 Fold:Di-copper centre-containing domain Superfamily:Di-copper centre-containing domain Family:Hemocyanin middle domain 33 d1m98a1 not modelled 11.4 21 Fold:Orange carotenoid protein, N-terminal domain Superfamily:Orange carotenoid protein, N-terminal domain Family:Orange carotenoid protein, N-terminal domain 34 d1b4ub_ not modelled 11.3 14 Fold:Phosphorylase/hydrolase-like Superfamily:LigB-like Family:LigB-like 35 c1w5jA_ not modelled 11.0 53 PDB header:four helix bundle Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: an anti-parallel four helix bundle 36 c1w5jC_ not modelled 11.0 53 PDB header:four helix bundle Chain: C: PDB Molecule:general control protein gcn4; PDBTitle: an anti-parallel four helix bundle 37 c1w5jB_ not modelled 11.0 53 PDB header:four helix bundle Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: an anti-parallel four helix bundle 38 c1w5jD_ not modelled 11.0 53 PDB header:four helix bundle Chain: D: PDB Molecule:general control protein gcn4; PDBTitle: an anti-parallel four helix bundle 39 d3bwuc2 not modelled 10.6 17 Fold:C2 domain-like Superfamily:Periplasmic chaperone C-domain Family:Periplasmic chaperone C-domain 40 c1u9fA_ not modelled 9.9 59 PDB header:transcription Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: heterocyclic peptide backbone modification in gcn4-pli based coiled2 coils: replacement of k(15)l(16) 41 c2g7hA_ not modelled 9.9 15 PDB header:transferase Chain: A: PDB Molecule:methylated-dna--protein-cysteine PDBTitle: structure of an o6-methylguanine dna methyltransferase from2 methanococcus jannaschii (mj1529) 42 c1i6hC_ not modelled 9.8 50 PDB header:transcription/dna-rna hybrid Chain: C: PDB Molecule:dna-directed rna polymerase ii 45kd polypeptide; PDBTitle: rna polymerase ii elongation complex 43 c3howC_ not modelled 9.8 50 PDB header:transcription,transferase/dna/rna hybrid Chain: C: PDB Molecule:dna-directed rna polymerase ii subunit rpb3; PDBTitle: complete rna polymerase ii elongation complex iii with a t-u2 mismatch and a frayed rna 3'-uridine 44 d1llaa2 not modelled 9.7 28 Fold:Di-copper centre-containing domain Superfamily:Di-copper centre-containing domain Family:Hemocyanin middle domain 45 c1gcmB_ not modelled 9.4 52 PDB header:transcription regulation Chain: B: PDB Molecule:gcn4p-ii; PDBTitle: gcn4 leucine zipper core mutant p-li 46 c2eocA_ not modelled 9.4 20 PDB header:transferase Chain: A: PDB Molecule:poly [adp-ribose] polymerase 3; PDBTitle: solution structure of the wgr domain from human poly [adp-2 ribose] polymerase-3 47 c1gcmC_ not modelled 9.0 52 PDB header:transcription regulation Chain: C: PDB Molecule:gcn4p-ii; PDBTitle: gcn4 leucine zipper core mutant p-li 48 c1u9fB_ not modelled 8.9 59 PDB header:transcription Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: heterocyclic peptide backbone modification in gcn4-pli based coiled2 coils: replacement of k(15)l(16) 49 c1u9fC_ not modelled 8.9 59 PDB header:transcription Chain: C: PDB Molecule:general control protein gcn4; PDBTitle: heterocyclic peptide backbone modification in gcn4-pli based coiled2 coils: replacement of k(15)l(16) 50 c2pmzS_ not modelled 8.7 32 PDB header:translation, transferase Chain: S: PDB Molecule:dna-directed rna polymerase subunit d; PDBTitle: archaeal rna polymerase from sulfolobus solfataricus 51 c3efyB_ not modelled 8.2 38 PDB header:cell cycle Chain: B: PDB Molecule:cif (cell cycle inhibiting factor); PDBTitle: structure of the cyclomodulin cif from pathogenic2 escherichia coli 52 c1u9fD_ not modelled 8.2 59 PDB header:transcription Chain: D: PDB Molecule:general control protein gcn4; PDBTitle: heterocyclic peptide backbone modification in gcn4-pli based coiled2 coils: replacement of k(15)l(16) 53 d1p5va2 not modelled 8.0 20 Fold:C2 domain-like Superfamily:Periplasmic chaperone C-domain Family:Periplasmic chaperone C-domain 54 c1bdfC_ not modelled 7.8 40 PDB header:nucleotidyltransferase Chain: C: PDB Molecule:rna polymerase alpha subunit; PDBTitle: structure of escherichia coli rna polymerase alpha subunit2 n-terminal domain 55 d1l4ia2 not modelled 7.7 15 Fold:C2 domain-like Superfamily:Periplasmic chaperone C-domain Family:Periplasmic chaperone C-domain 56 d1xsqa_ not modelled 7.5 20 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Ureidoglycolate hydrolase AllA 57 c3rrrM_ not modelled 7.4 78 PDB header:viral protein Chain: M: PDB Molecule:fusion glycoprotein f0; PDBTitle: structure of the rsv f protein in the post-fusion conformation 58 c1m98A_ not modelled 7.3 21 PDB header:unknown function Chain: A: PDB Molecule:orange carotenoid protein; PDBTitle: crystal structure of orange carotenoid protein 59 d2bdra1 not modelled 7.2 43 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Ureidoglycolate hydrolase AllA 60 c1uo3B_ not modelled 7.1 58 PDB header:four helix bundle Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 61 c3h0gO_ not modelled 7.1 46 PDB header:transcription Chain: O: PDB Molecule:dna-directed rna polymerase ii subunit rpb3; PDBTitle: rna polymerase ii from schizosaccharomyces pombe 62 d2j2za2 not modelled 7.1 21 Fold:C2 domain-like Superfamily:Periplasmic chaperone C-domain Family:Periplasmic chaperone C-domain 63 c1smyB_ not modelled 7.0 50 PDB header:transferase Chain: B: PDB Molecule:dna-directed rna polymerase alpha chain; PDBTitle: structural basis for transcription regulation by alarmone2 ppgpp 64 c1uo5B_ not modelled 6.9 58 PDB header:four helix bundle Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 65 c1uo5A_ not modelled 6.9 58 PDB header:four helix bundle Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 66 d1nbwa1 not modelled 6.7 35 Fold:The "swivelling" beta/beta/alpha domain Superfamily:Swiveling domain of dehydratase reactivase alpha subunit Family:Swiveling domain of dehydratase reactivase alpha subunit 67 c2k21A_ not modelled 6.6 71 PDB header:membrane protein Chain: A: PDB Molecule:potassium voltage-gated channel subfamily e PDBTitle: nmr structure of human kcne1 in lmpg micelles at ph 6.0 and2 40 degree c 68 c1untA_ not modelled 6.3 58 PDB header:four helix bundle Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 69 d1rpya_ not modelled 6.3 14 Fold:SH2-like Superfamily:SH2 domain Family:SH2 domain 70 d1sisa_ not modelled 6.2 71 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Scorpion toxin-like Family:Short-chain scorpion toxins 71 c1w5kB_ not modelled 6.0 47 PDB header:four helix bundle Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: an anti-parallel four helix bundle 72 c1w5kD_ not modelled 6.0 47 PDB header:four helix bundle Chain: D: PDB Molecule:general control protein gcn4; PDBTitle: an anti-parallel four helix bundle 73 c1w5kC_ not modelled 6.0 47 PDB header:four helix bundle Chain: C: PDB Molecule:general control protein gcn4; PDBTitle: an anti-parallel four helix bundle 74 c1w5kA_ not modelled 6.0 47 PDB header:four helix bundle Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: an anti-parallel four helix bundle 75 c2r2vB_ not modelled 5.9 50 PDB header:de novo protein Chain: B: PDB Molecule:gcn4 leucine zipper; PDBTitle: sequence determinants of the topology of the lac repressor2 tetrameric coiled coil 76 c1untB_ not modelled 5.9 58 PDB header:four helix bundle Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 77 d1bcoa1 not modelled 5.8 23 Fold:mu transposase, C-terminal domain Superfamily:mu transposase, C-terminal domain Family:mu transposase, C-terminal domain 78 c1unuB_ not modelled 5.5 42 PDB header:four helix bundle Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 79 c1unuA_ not modelled 5.5 42 PDB header:four helix bundle Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: structure based engineering of internal molecular surfaces2 of four helix bundles 80 d1ugla_ not modelled 5.5 100 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Scorpion toxin-like Family:Plant defensins