Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	E	T	L	I	A	I	S	R	W	L	A	K	Q	H	V	V	T	W	C	V	Q	Q	E	G	E	L	W	C	A	N	A	F	Y	L	F	D	A	Q	K	V	A	F	Y	I	L	T	E	E	K	T	R	H	A	Q	M	S	G	P	Q
Secondary structure
SS confidence
Disorder		?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		A	A	V	A	G	T	V	N	G	Q	P	K	T	V	A	L	I	R	G	V	Q	F	K	G	E	I	R	R	L	E	G	E	E	S	D	L	A	R	K	A	Y	N	R	R	F	P	V	A	R	M	L	S	A	P	V	W	E	I	R	L
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Sequence		D	E	I	K	F	T	D	N	T	L	G	F	G	K	K	M	I	W	L	R	D	S	G	T	E	Q	A
Secondary structure
SS confidence
Disorder																						?	?	?	?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 2arz chain A domain 1 Region: 2 - 142 Aligned: 136 Modelled: 141 Confidence: 100.0% Identity: 20% Fold: Split barrel-like Superfamily: FMN-binding split barrel Family: PNP-oxidase like Phyre2 PDB 3gas chain A Region: 5 - 142 Aligned: 132 Modelled: 138 Confidence: 100.0% Identity: 16% PDB header:oxidoreductase Chain: A: PDB Molecule:heme oxygenase; PDBTitle: crystal structure of helicobacter pylori heme oxygenase hugz2 in complex with heme Phyre2 PDB 3dnh chain B Region: 2 - 134 Aligned: 129 Modelled: 133 Confidence: 99.9% Identity: 16% PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein atu2129; PDBTitle: the crystal structure of the protein atu2129 (unknown function) from2 agrobacterium tumefaciens str. c58 Phyre2 PDB 1vl7 chain A Region: 8 - 133 Aligned: 122 Modelled: 126 Confidence: 99.9% Identity: 16% Fold: Split barrel-like Superfamily: FMN-binding split barrel Family: PNP-oxidase like Phyre2 PDB 1xhn chain A domain 1 Region: 2 - 138 Aligned: 133 Modelled: 137 Confidence: 99.9% Identity: 11% Fold: Split barrel-like Superfamily: FMN-binding split barrel Family: PNP-oxidase like Phyre2 PDB 1rfe chain A Region: 1 - 132 Aligned: 129 Modelled: 130 Confidence: 99.9% Identity: 16% Fold: Split barrel-like Superfamily: FMN-binding split barrel Family: PNP-oxidase like Phyre2 PDB 2hti chain A domain 1 Region: 1 - 123 Aligned: 117 Modelled: 123 Confidence: 99.9% Identity: 14% Fold: Split barrel-like Superfamily: FMN-binding split barrel Family: PNP-oxidase like Phyre2 PDB 2hti chain A Region: 1 - 123 Aligned: 117 Modelled: 123 Confidence: 99.9% Identity: 14% PDB header:fmn-binding protein Chain: A: PDB Molecule:bh0577 protein; PDBTitle: crystal structure of a flavin-nucleotide-binding protein (bh_0577)2 from bacillus halodurans at 2.50 a resolution Phyre2 PDB 3db0 chain B Region: 2 - 127 Aligned: 121 Modelled: 126 Confidence: 99.9% Identity: 12% PDB header:oxidoreductase Chain: B: PDB Molecule:lin2891 protein; PDBTitle: crystal structure of putative pyridoxamine 5'-phosphate oxidase2 (np_472219.1) from listeria innocua at 2.00 a resolution Phyre2 PDB 3f7e chain B Region: 6 - 123 Aligned: 113 Modelled: 118 Confidence: 99.9% Identity: 14% PDB header:unknown function Chain: B: PDB Molecule:pyridoxamine 5'-phosphate oxidase-related, fmn- PDBTitle: msmeg_3380 f420 reductase Phyre2 PDB 2fhq chain A domain 1 Region: 1 - 136 Aligned: 130 Modelled: 133 Confidence: 99.9% Identity: 11% Fold: Split barrel-like Superfamily: FMN-binding split barrel Family: PNP-oxidase like Phyre2 PDB 2ig6 chain B Region: 1 - 129 Aligned: 120 Modelled: 129 Confidence: 99.9% Identity: 10% PDB header:oxidoreductase Chain: B: PDB Molecule:nimc/nima family protein; PDBTitle: crystal structure of a nimc/nima family protein (ca_c2569) from2 clostridium acetobutylicum at 1.80 a resolution Phyre2 PDB 2asf chain A domain 1 Region: 6 - 128 Aligned: 117 Modelled: 123 Confidence: 99.8% Identity: 11% Fold: Split barrel-like Superfamily: FMN-binding split barrel Family: PNP-oxidase like Phyre2 PDB 3ec6 chain A Region: 6 - 129 Aligned: 118 Modelled: 124 Confidence: 99.8% Identity: 11% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:general stress protein 26; PDBTitle: crystal structure of the general stress protein 26 from bacillus2 anthracis str. sterne Phyre2 PDB 2i02 chain A domain 1 Region: 2 - 137 Aligned: 130 Modelled: 136 Confidence: 99.8% Identity: 9% Fold: Split barrel-like Superfamily: FMN-binding split barrel Family: PNP-oxidase like Phyre2 PDB 3fkh chain B Region: 1 - 133 Aligned: 125 Modelled: 133 Confidence: 99.8% Identity: 14% PDB header:oxidoreductase Chain: B: PDB Molecule:putative pyridoxamine 5'-phosphate oxidase; PDBTitle: crystal structure of putative pyridoxamine 5'-phosphate oxidase2 (np_601736.1) from corynebacterium glutamicum atcc 13032 kitasato at3 2.51 a resolution Phyre2 PDB 2re7 chain A Region: 2 - 127 Aligned: 122 Modelled: 126 Confidence: 99.8% Identity: 7% PDB header:oxidoreductase Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase related2 protein (psyc_0186) from psychrobacter arcticus 273-4 at 2.50 a3 resolution Phyre2 PDB 2fg9 chain A domain 1 Region: 1 - 123 Aligned: 121 Modelled: 122 Confidence: 99.8% Identity: 13% Fold: Split barrel-like Superfamily: FMN-binding split barrel Family: PNP-oxidase like Phyre2 PDB 2hq7 chain A domain 1 Region: 1 - 143 Aligned: 135 Modelled: 143 Confidence: 99.8% Identity: 13% Fold: Split barrel-like Superfamily: FMN-binding split barrel Family: PNP-oxidase like Phyre2 PDB 2hq9 chain A domain 1 Region: 1 - 123 Aligned: 118 Modelled: 123 Confidence: 99.8% Identity: 9% Fold: Split barrel-like Superfamily: FMN-binding split barrel Family: PNP-oxidase like Phyre2 1 d2arza1 2 c3gasA_ 3 c3dnhB_ 4 d1vl7a_ 5 d1xhna1 6 d1rfea_ 7 d2htia1 8 c2htiA_ 9 c3db0B_ 10 c3f7eB_ 11 d2fhqa1 12 c2ig6B_ 13 d2asfa1 14 c3ec6A_ 15 d2i02a1 16 c3fkhB_ 17 c2re7A_ 18 d2fg9a1 19 d2hq7a1 20 d2hq9a1 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2arza1 100.0 20 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 2 c3gasA_ 100.0 16 PDB header:oxidoreductase Chain: A: PDB Molecule:heme oxygenase; PDBTitle: crystal structure of helicobacter pylori heme oxygenase hugz2 in complex with heme 3 c3dnhB_ 99.9 16 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein atu2129; PDBTitle: the crystal structure of the protein atu2129 (unknown function) from2 agrobacterium tumefaciens str. c58 4 d1vl7a_ 99.9 16 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 5 d1xhna1 99.9 11 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 6 d1rfea_ 99.9 16 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 7 d2htia1 99.9 14 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 8 c2htiA_ 99.9 14 PDB header:fmn-binding protein Chain: A: PDB Molecule:bh0577 protein; PDBTitle: crystal structure of a flavin-nucleotide-binding protein (bh_0577)2 from bacillus halodurans at 2.50 a resolution 9 c3db0B_ 99.9 12 PDB header:oxidoreductase Chain: B: PDB Molecule:lin2891 protein; PDBTitle: crystal structure of putative pyridoxamine 5'-phosphate oxidase2 (np_472219.1) from listeria innocua at 2.00 a resolution 10 c3f7eB_ 99.9 14 PDB header:unknown function Chain: B: PDB Molecule:pyridoxamine 5'-phosphate oxidase-related, fmn- PDBTitle: msmeg_3380 f420 reductase 11 d2fhqa1 99.9 11 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 12 c2ig6B_ 99.9 10 PDB header:oxidoreductase Chain: B: PDB Molecule:nimc/nima family protein; PDBTitle: crystal structure of a nimc/nima family protein (ca_c2569) from2 clostridium acetobutylicum at 1.80 a resolution 13 d2asfa1 99.8 11 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 14 c3ec6A_ 99.8 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:general stress protein 26; PDBTitle: crystal structure of the general stress protein 26 from bacillus2 anthracis str. sterne 15 d2i02a1 99.8 9 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 16 c3fkhB_ 99.8 14 PDB header:oxidoreductase Chain: B: PDB Molecule:putative pyridoxamine 5'-phosphate oxidase; PDBTitle: crystal structure of putative pyridoxamine 5'-phosphate oxidase2 (np_601736.1) from corynebacterium glutamicum atcc 13032 kitasato at3 2.51 a resolution 17 c2re7A_ 99.8 7 PDB header:oxidoreductase Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase related2 protein (psyc_0186) from psychrobacter arcticus 273-4 at 2.50 a3 resolution 18 d2fg9a1 99.8 13 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 19 d2hq7a1 99.8 13 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 20 d2hq9a1 99.8 9 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 21 c2hhzA_ not modelled 99.8 17 PDB header:oxidoreductase Chain: A: PDB Molecule:pyridoxamine 5'-phosphate oxidase-related; PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase-related2 protein (ssuidraft_2804) from streptococcus suis 89/1591 at 2.00 a3 resolution 22 c2iabB_ not modelled 99.8 12 PDB header:unknown function Chain: B: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a protein with fmn-binding split barrel fold2 (np_828636.1) from streptomyces avermitilis at 2.00 a resolution 23 d1w9aa_ not modelled 99.8 8 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 24 c3dmbA_ not modelled 99.8 9 PDB header:oxidoreductase Chain: A: PDB Molecule:putative general stress protein 26 with a pnp-oxidase like PDBTitle: crystal structure of a putative general stress family protein2 (xcc2264) from xanthomonas campestris pv. campestris at 2.30 a3 resolution 25 d2fura1 not modelled 99.7 11 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 26 c3cp3A_ not modelled 99.7 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of conserved protein of unknown function dip18742 from corynebacterium diphtheriae 27 d1flma_ not modelled 99.7 16 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 28 d2vpaa1 not modelled 99.7 17 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 29 c2htdB_ not modelled 99.7 10 PDB header:oxidoreductase Chain: B: PDB Molecule:predicted flavin-nucleotide-binding protein from cog3576 PDBTitle: crystal structure of a putative pyridoxamine 5'-phosphate oxidase2 (ldb0262) from lactobacillus delbrueckii subsp. at 1.60 a resolution 30 c2q9kA_ not modelled 99.7 12 PDB header:oxidoreductase Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a putative oxidoreductase (exig_1997) from2 exiguobacterium sibiricum 255-15 at 1.59 a resolution 31 d1nrga_ not modelled 99.7 12 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 32 c1nrgA_ not modelled 99.7 12 PDB header:oxidoreductase Chain: A: PDB Molecule:pyridoxine 5'-phosphate oxidase; PDBTitle: structure and properties of recombinant human pyridoxine-5'-phosphate2 oxidase 33 c2qeaB_ not modelled 99.7 11 PDB header:oxidoreductase Chain: B: PDB Molecule:putative general stress protein 26; PDBTitle: crystal structure of a putative general stress protein 26 (jann_0955)2 from jannaschia sp. ccs1 at 2.46 a resolution 34 c2ou5B_ not modelled 99.7 15 PDB header:flavoprotein Chain: B: PDB Molecule:pyridoxamine 5'-phosphate oxidase-related, fmn-binding; PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase-related fmn-2 binding protein (jann_0254) from jannaschia sp. ccs1 at 1.60 a3 resolution 35 d1t9ma_ not modelled 99.7 19 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 36 d1ty9a_ not modelled 99.6 14 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 37 c2ol5B_ not modelled 99.6 13 PDB header:transcription regulator Chain: B: PDB Molecule:pai 2 protein; PDBTitle: crystal structure of a protease synthase and sporulation negative2 regulatory protein pai 2 from bacillus stearothermophilus 38 d1dnla_ not modelled 99.6 18 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 39 c2a2jA_ not modelled 99.6 12 PDB header:oxidoreductase Chain: A: PDB Molecule:pyridoxamine 5'-phosphate oxidase; PDBTitle: crystal structure of a putative pyridoxine 5'-phosphate oxidase2 (rv2607) from mycobacterium tuberculosis 40 d2a2ja1 not modelled 99.6 15 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 41 c2i51B_ not modelled 99.5 9 PDB header:flavoprotein Chain: B: PDB Molecule:uncharacterized conserved protein of cog5135; PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase-related, fmn2 binding protein (npun_f5749) from nostoc punctiforme pcc 73102 at3 1.40 a resolution 42 d1ci0a_ not modelled 99.5 16 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 43 c3ba3A_ not modelled 99.2 11 PDB header:oxidoreductase Chain: A: PDB Molecule:pyridoxamine 5'-phosphate oxidase-like protein; PDBTitle: crystal structure of pyridoxamine 5'-phosphate oxidase-like protein2 (np_783940.1) from lactobacillus plantarum at 1.55 a resolution 44 c3h96B_ not modelled 98.3 15 PDB header:flavoprotein Chain: B: PDB Molecule:f420-h2 dependent reductase a; PDBTitle: msmeg_3358 f420 reductase 45 d2imla1 not modelled 90.6 7 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:MTH863-like 46 d2ptfa1 not modelled 90.0 9 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:MTH863-like 47 c2ptfB_ not modelled 87.1 8 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein mth_863; PDBTitle: crystal structure of protein mth_863 from methanobacterium2 thermoautotrophicum bound to fmn 48 d2nr4a1 not modelled 82.2 8 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:MTH863-like 49 d1ejea_ not modelled 81.3 10 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:NADH:FMN oxidoreductase-like 50 c3b5mD_ not modelled 74.0 9 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of conserved uncharacterized protein from2 rhodopirellula baltica 51 c3hmzA_ not modelled 61.8 15 PDB header:oxidoreductase Chain: A: PDB Molecule:flavin reductase domain protein, fmn-binding; PDBTitle: crystal structure of a fmn-binding domain of flavin reductases-like2 enzyme (sbal_0626) from shewanella baltica os155 at 1.50 a resolution 52 d1rz0a_ not modelled 42.5 12 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:NADH:FMN oxidoreductase-like 53 c3e4vA_ not modelled 42.5 8 PDB header:flavoprotein Chain: A: PDB Molecule:nadh:fmn oxidoreductase like protein; PDBTitle: crystal structure of nadh:fmn oxidoreductase like protein in complex2 with fmn (yp_544701.1) from methylobacillus flagellatus kt at 1.40 a3 resolution 54 c2r6vA_ not modelled 40.9 10 PDB header:flavoprotein Chain: A: PDB Molecule:uncharacterized protein ph0856; PDBTitle: crystal structure of fmn-binding protein (np_142786.1) from pyrococcus2 horikoshii at 1.35 a resolution 55 d1wgba_ not modelled 35.3 7 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:NADH:FMN oxidoreductase-like 56 c3cb0B_ not modelled 31.7 6 PDB header:oxidoreductase Chain: B: PDB Molecule:4-hydroxyphenylacetate 3-monooxygenase; PDBTitle: cobr 57 c3fgeA_ not modelled 31.3 3 PDB header:oxidoreductase Chain: A: PDB Molecule:putative flavin reductase with split barrel domain; PDBTitle: crystal structure of putative flavin reductase with split barrel2 domain (yp_750721.1) from shewanella frigidimarina ncimb 400 at 1.743 a resolution 58 c2r0xA_ not modelled 27.7 7 PDB header:oxidoreductase Chain: A: PDB Molecule:possible flavin reductase; PDBTitle: crystal structure of a putative flavin reductase (ycdh, hs_1225) from2 haemophilus somnus 129pt at 1.06 a resolution 59 c3bnkB_ not modelled 26.8 6 PDB header:electron transport Chain: B: PDB Molecule:flavoredoxin; PDBTitle: x-ray crystal structure of flavoredoxin from methanosarcina2 acetivorans 60 c3pftA_ not modelled 23.9 7 PDB header:oxidoreductase Chain: A: PDB Molecule:flavin reductase; PDBTitle: crystal structure of untagged c54a mutant flavin reductase (dszd) in2 complex with fmn from mycobacterium goodii 61 c2d5mA_ not modelled 20.1 8 PDB header:electron transport Chain: A: PDB Molecule:flavoredoxin; PDBTitle: flavoredoxin of desulfovibrio vulgaris (miyazaki f) 62 d1i0ra_ not modelled 19.7 8 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:NADH:FMN oxidoreductase-like 63 c2ytyA_ not modelled 18.0 6 PDB header:rna binding protein Chain: A: PDB Molecule:cold shock domain-containing protein e1; PDBTitle: solution structure of the fourth cold-shock domain of the human2 kiaa0885 protein (unr protein) 64 c3hfoC_ not modelled 17.9 26 PDB header:rna binding protein Chain: C: PDB Molecule:ssr3341 protein; PDBTitle: crystal structure of an hfq protein from synechocystis sp. 65 c2d38A_ not modelled 14.0 10 PDB header:oxidoreductase Chain: A: PDB Molecule:hypothetical nadh-dependent fmn oxidoreductase; PDBTitle: the crystal structure of flavin reductase hpac complexed with nadp+ 66 c3nfwB_ not modelled 13.8 11 PDB header:oxidoreductase Chain: B: PDB Molecule:nitrilotriacetate monooxygenase component b; PDBTitle: crystal structure of nitrilotriacetate monooxygenase component b2 (a0r521 homolog) from mycobacterium thermoresistibile 67 c2ecrA_ not modelled 12.5 13 PDB header:oxidoreductase Chain: A: PDB Molecule:flavin reductase component (hpac) of 4-hydroxyphenylacetate PDBTitle: crystal structure of the ligand-free form of the flavin reductase2 component (hpac) of 4-hydroxyphenylacetate 3-monooxygenase 68 c2qckA_ not modelled 12.4 11 PDB header:oxidoreductase Chain: A: PDB Molecule:flavin reductase domain protein; PDBTitle: crystal structure of flavin reductase domain protein (yp_831077.1)2 from arthrobacter sp. fb24 at 1.90 a resolution 69 c3hfnA_ not modelled 11.3 23 PDB header:rna binding protein Chain: A: PDB Molecule:asl2047 protein; PDBTitle: crystal structure of an hfq protein from anabaena sp. 70 c1ykaA_ not modelled 10.8 21 PDB header:electron transport Chain: A: PDB Molecule:monothiol glutaredoxin ydhd; PDBTitle: solution structure of grx4, a monothiol glutaredoxin from2 e. coli. 71 d1aisa2 not modelled 9.3 8 Fold:TBP-like Superfamily:TATA-box binding protein-like Family:TATA-box binding protein (TBP), C-terminal domain 72 c2wwaJ_ not modelled 8.5 35 PDB header:ribosome Chain: J: PDB Molecule:60s ribosomal protein l19; PDBTitle: cryo-em structure of idle yeast ssh1 complex bound to the2 yeast 80s ribosome 73 c3k87B_ not modelled 8.3 11 PDB header:oxidoreductase Chain: B: PDB Molecule:chlorophenol-4-monooxygenase component 1; PDBTitle: crystal structure of nadh:fad oxidoreductase (tftc) - fad2 complex 74 c2wulB_ not modelled 7.9 15 PDB header:oxidoreductase Chain: B: PDB Molecule:glutaredoxin related protein 5; PDBTitle: crystal structure of the human glutaredoxin 5 with bound2 glutathione in an fes cluster 75 c3bpkB_ not modelled 6.9 13 PDB header:oxidoreductase Chain: B: PDB Molecule:nitrilotriacetate monooxygenase component b; PDBTitle: crystal structure of nitrilotriacetate monooxygenase2 component b from bacillus cereus 76 c3hy4A_ not modelled 6.8 63 PDB header:ligase Chain: A: PDB Molecule:5-formyltetrahydrofolate cyclo-ligase; PDBTitle: structure of human mthfs with n5-iminium phosphate 77 d1sbqa_ not modelled 6.5 63 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:Methenyltetrahydrofolate synthetase 78 c1u3fA_ not modelled 6.4 63 PDB header:ligase Chain: A: PDB Molecule:5,10-methenyltetrahydrofolate synthetase; PDBTitle: structural and functional characterization of a 5,10-2 methenyltetrahydrofolate synthetase from mycoplasma3 pneumoniae (gi: 13508087) 79 c1ydmC_ not modelled 5.5 38 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:hypothetical protein yqgn; PDBTitle: x-ray structure of northeast structural genomics target sr44

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0