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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1ydmC_

Fold library idPDB HeaderMoleculeTitle
c1ydmC_PDB header: structural genomics, unknown functionChain: C: PDB Molecule: hypothetical protein yqgn;PDBTitle: x-ray structure of northeast structural genomics target sr44


Added to library: Tue Mar 16 13:44:40 2010
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence QLRKKTLEALSALSNEDILQKTERXYKYLFSLPEWQNAGTIAVTISRGLEIPTRPVIEQAWEEGKQVCIP
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Known secondary structure (DSSP)
S
TSS
S




TTS


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence KCHPDTKKXQFRTYQTDDQLETVYAGLLEPVEKTKEVNPSQIDLXIVPGVCFDVNGFRVGFGGGYYDRYL
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Known secondary structure (DSSP)
SSSS




TTTTTS





SS


GGG
S

STTS

SSTT
 .........150.........160.........170.........180..
Sequence SEYEGKTVSLLLECQLFAHVPRLPHDIPVHKLITEDRIISCF
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Known secondary structure (DSSP)

S



GGGS




SS



S
SS






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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