Job Description P10121 Confidence 98.66% Date Thu Jan 5 11:32:03 GMT 2012 Rank 54 Aligned Residues 202 % Identity 17% Template c3md0A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:arginine/ornithine transport system atpase; PDBTitle: crystal structure of arginine/ornithine transport system2 atpase from mycobacterium tuberculosis bound to gdp (a ras-3 like gtpase superfamily protein) Resolution 2.45 Å

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		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.				.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		I	T	N	L	T	E	G	A	S	R	K	Q	L	R	D	A	E	A	L	Y	G	L	L	K	.	.	.	E	E	M	G	E	I	L	A	K	V	D	E	P	L	N	V	E	G	K	A	P	F	V	I	L	M	V	G	V	N	G	V	G	K	T	T	T	I	G	K	L	A	R	Q	F	E	Q	Q	G	K	S	V	M
Query Conservation																										.	.	.
Alig confidence																										.	.	.
Template Conservation
Template Sequence		V	D	G	L	A	T	A	V	R	G	G	D	R	A	A	L	P	R	A	I	T	L	V	E	S	T	R	P	D	H	R	E	Q	A	Q	Q	L	L	L	R	L	L	P	D	S	G	N	A	H	R	V	G	I	T	G	V	P	G	V	G	K	S	T	A	I	E	A	L	G	M	H	L	I	E	R	G	H	R	V	A
Template Known Secondary structure											T	T		S	S													S															G	G	G				S									T	T	S	S														T	T	T
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	G	D	T	F	R	A	A	A	V	E	Q	L	Q	V	W	G	Q	R	N	N	I	P	V	I	A	Q	H	T	G	A	D	S	A	S	V	I	F	D	A	I	Q	A	A	K	A	R	N	I	D	V	L	I	A	D	T	A	G	R	L	Q	N	K	S	H	L	M	E	E	L	K	K	I	V	R	V	M	K
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.																		.																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.																		.																												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	A	V	R	M	.	.	.	.	.	.	.	.	.	A	R	L	A	V	H	P	N	A	Y	I	R	P	S	T	L	G	.	G	V	T	R	A	T	R	E	T	V	V	L	L	E	A	A	G	F	D	V	I	L	I	E	T	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	S	E	V	A	V	A	N	M
Template Known Secondary structure								.	.	.	.	.	.	.	.	.					T	S	T	T										.																T	T											.	.	.	.	.	.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.																		.																												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.										.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140													.	.	.	.	.	.	.	.
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.														.	.	.	.	.	470	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	D	V	E	A	P	H	E	V	M	L	T	I	D	A	S	T	G	Q	N	A	V	S	Q	A	K	L	F	H	E	A	V	G	L	T	G	I	T	L	T	K	L	D	G	T	A	K	G	G	V	I	F	S	V	A	D	Q	F	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	P	I	R	Y	I	G
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.														.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.														.	.
Template Sequence		.	.	.	.	.	.	V	D	T	F	V	L	L	T	L	A	R	T	G	.	.	D	Q	L	Q	G	I	K	K	G	V	L	E	L	A	D	I	V	V	V	N	K	A	D	G	E	H	H	K	E	A	R	L	A	A	R	E	L	S	A	A	I	R	L	I	Y	P	R	E	A	L	W	R	P	P	V	L	T	M	S
Template Known Secondary structure		.	.	.	.	.	.		S								S		T	T	.	.	T	T	T	T	T			T	T	G	G	G	G		S									G	G	G																			S	T	T		S	S									B
Template Predicted Secondary structure		.	.	.	.	.	.														.	.
Template SS confidence
								172	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
				473	.	.	.	.	.	.	480
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	V	G	E	R	I	E	D	L
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		A	V	E	G	R	G	L	A	E	L
Template Known Secondary structure		T	T	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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