54 c3md0A_ Probab=98.66   E-value=9e-06  Score=60.27  Aligned_columns=202  Identities=17%

Q ss_pred             HHHHHHHHHCCCCCCHHHHHHHHH---HHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEE
Q ss_conf             999999851145899999999999---99999740223431214679769999669998844699999999985299379
Q batch____       249 ITNLTEGASRKQLRDAEALYGLLK---EEMGEILAKVDEPLNVEGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVM  325 (497)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~G~~G~GKTtt~akla~~~~~~~~~v~  325 (497)
                      |+.+.+.+...+...-......+.   .............+....++..+|+|+|++|+||||.+-.|+.....-+.+++
T Consensus         2 ~~~~~~~~~~g~r~~l~r~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~Iai~G~pnaGKSSLln~L~~~~~~~~~~~~   81 (301)
T c3md0A_           2 VDGLATAVRGGDRAALPRAITLVESTRPDHREQAQQLLLRLLPDSGNAHRVGITGVPGVGKSTAIEALGMHLIERGHRVA   81 (301)
T ss_dssp             HHHHHHHHHTTCSSHHHHHHHHHHCCSHHHHHHHHHHHHHHGGGCCCSEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEE
T ss_pred             HHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCC
T ss_conf             78999999825878899999999601265899999999875332289728999738988788999999987641457675


Q ss_pred             EEECCCCCHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             99815564767999999999748827973883569999999999999779969998288687889999999999999975
Q batch____       326 LAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMK  405 (497)
Q Consensus       326 ~~~~Dt~r~~a~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vliDtaGr~~~~~~~~~~l~~~~~~~~  405 (497)
                      ..+.+.         ..+...-|+.+.....+ -......+.+......++|.+++++.+            ..+.....
T Consensus        82 ~t~~~~---------~~~~~~~~~~v~~~dt~-G~~~~~~~~~~~~d~~~~d~~~~e~~~------------~~~~~~~~  139 (301)
T c3md0A_          82 VLAVRM---------ARLAVHPNAYIRPSTLG-GVTRATRETVVLLEAAGFDVILIETGQ------------SEVAVANM  139 (301)
T ss_dssp             EEECCC---------HHHHTSTTEEEECCCHH-HHHHHHHHHHHHHHHTTCCEEEEECCC------------HHHHHHTT
T ss_pred             EEEECC---------EEEEEECCEEEEEEECC-CCCCHHHHHHHHHHHCCCCHHHHHHHH------------HHHHHHHC
T ss_conf             167710---------01360398789996023-411003678999642386521454368------------99998613


Q ss_pred             HCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHH-------------CCCEEEEE
Q ss_conf             31466884089985247878999999998430789759996565778269999999985-------------89889995
Q batch____       406 KLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQF-------------GIPIRYIG  472 (497)
Q Consensus       406 ~~~~~~~~~~~lv~~a~~~~~~~~~~~~~~~~~~~~~~i~tk~D~~~~~G~~~~~~~~~-------------~~pi~~~~  472 (497)
                            .+.+++|++++.+  ...+.......-...-++++|+|.......-..+....             ..||.+++
T Consensus       140 ------~d~~~~v~d~~~~--~~~~~~~~~~~~~~~i~viNK~D~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~S  211 (301)
T c3md0A_         140 ------VDTFVLLTLARTG--DQLQGIKKGVLELADIVVVNKADGEHHKEARLAARELSAAIRLIYPREALWRPPVLTMS  211 (301)
T ss_dssp             ------CSEEEEEEESCTT--TTTTTCCTTGGGGCSEEEEECCCGGGHHHHHHHHHHHHHHHHHHSTTCSSCCCCEEECB
T ss_pred             ------CCEEEEEECCCCC--HHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCHHCCCCCCCEEEEE
T ss_conf             ------8855796255785--26787544323677089851546788001325899999997530100025898389972


Q ss_pred             --CCCCCCCC
Q ss_conf             --69985655
Q batch____       473 --VGERIEDL  480 (497)
Q Consensus       473 --~G~~~~dl  480 (497)
                        +|.++++|
T Consensus       212 a~~g~gi~~L  221 (301)
T c3md0A_         212 AVEGRGLAEL  221 (301)
T ss_dssp             TTTTBSHHHH
T ss_pred             CCCCCCHHHH
T ss_conf             7887998999