Job Description P30843 Confidence 99.88% Date Thu Jan 5 11:46:27 GMT 2012 Rank 14 Aligned Residues 179 % Identity 21% Template c1rnlA_ PDB info PDB header:signal transduction protein Chain: A: PDB Molecule:nitrate/nitrite response regulator protein narl; PDBTitle: the nitrate/nitrite response regulator protein narl from narl Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		M	K	I	L	I	V	E	D	D	T	L	L	L	Q	G	L	I	L	A	A	Q	T	E	G	.	.	Y	A	C	D	S	V	T	T	A	R	M	A	E	Q	S	L	E	A	G	H	Y	S	L	V	V	L	D	L	G	L	P	D	E	D	G	L	H	F	L	A	R	I	R	Q	K	K	Y	T	L	P	V	L	I	L
Query Conservation																										.	.
Alig confidence																										.	.
Template Conservation
Template Sequence		A	T	I	L	L	I	D	D	H	P	M	L	R	T	G	V	K	Q	L	I	S	M	A	P	D	I	T	V	V	G	E	A	S	N	G	E	Q	G	I	E	L	A	E	S	L	D	P	D	L	I	L	L	D	L	N	M	P	G	M	N	G	L	E	T	L	D	K	L	R	E	K	S	L	S	G	R	I	V	V	F
Template Known Secondary structure									S														T		T	T								S	S														S						T	T		G	G	G										T	T	S				S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	R	D	T	L	T	D	K	I	A	G	L	D	V	G	A	D	D	Y	L	V	K	P	F	A	L	E	E	L	H	A	R	I	R	A	L	L	R	R	H	N	N	Q	G	E	S	E	L	I	V	G	N	L	T	L	N	M	G	R	R	Q	V	W	M	G	G	E	E	L	I	L	T	P	K	E	Y	A	L	L
Query Conservation
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	V	S	N	H	E	E	D	V	V	T	A	L	K	R	G	A	D	G	Y	L	L	K	D	M	E	P	E	D	L	L	K	A	L	H	Q	A	A	A	G	E	M	V	L	S	E	A	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	L	A	A	S	L	Q	L	T	P	R	E	R	D	I	L
Template Known Secondary structure			S		S											T	T		S					T	T	S															S						T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.															.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	L	M	L	K	A	G	S	P	V	H	R	E	I	L	Y	N	D	I	Y	N	W	D	N	E	P	S	T	N	T	L	E	V	H	I	H	N	L	R	D	K	V	G
Query Conservation
Alig confidence									.	.	.	.										.	.	.	.	.
Template Conservation									.	.	.	.										.	.	.	.	.
Template Sequence		K	L	I	A	Q	G	L	.	.	.	.	P	N	K	M	I	A	R	R	L	.	.	.	.	.	D	I	T	E	S	T	V	K	V	H	V	K	H	M	L	K	K	M	K
Template Known Secondary structure						T	T		.	.	.	.										.	.	.	.	.	T																	T	T
Template Predicted Secondary structure									.	.	.	.										.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.					.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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