14 c1rnlA_ Probab=99.88   E-value=2.1e-22  Score=146.10  Aligned_columns=179  Identities=21%

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             959998699899999999999889--899999898999999984888520012322222222222222222234421012
Q batch____         1 MKILIVEDDTLLLQGLILAAQTEG--YACDSVTTARMAEQSLEAGHYSLVVLDLGLPDEDGLHFLARIRQKKYTLPVLIL   78 (222)
Q Consensus         1 mkILivddd~~~~~~l~~~L~~~g--~~v~~a~~~~e~l~~~~~~~~dlvild~~~~~~~g~~~~~~ir~~~~~~~ii~l   78 (222)
                      +||||||||+.++.++..+|+..+  ..|.+|.|+.||++.+.+..||++++|+.+|+++|...+..++...+..+++++
T Consensus         3 i~Ilivdd~~~~~~~l~~~L~~~~~~~~v~~a~~~~eal~~~~~~~pdiilld~~l~~~~g~~~~~~~~~~~~~~~~~~~   82 (200)
T c1rnlA_           3 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVF   82 (200)
T ss_dssp             EEEEEECSCHHHHHHHHHHHHTCTTEEEEEEESSHHHHHHHHHHHCCSEEEEETTCGGGCHHHHHHHHTTSCCCSEEEEE
T ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
T ss_conf             08999749989999999999848981799997898999999987199755421111100013689997420310012344


Q ss_pred             CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             43201100002344310133423421123135553300123322222222222222222222233321111111111013
Q batch____        79 TARDTLTDKIAGLDVGADDYLVKPFALEELHARIRALLRRHNNQGESELIVGNLTLNMGRRQVWMGGEELILTPKEYALL  158 (222)
Q Consensus        79 t~~~~~~~~~~~~~~g~~~~~~kp~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~e~~ll  158 (222)
                      +..........+...+..++..++.....+...................              ........+|++|..++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~lt~re~~vl  148 (200)
T c1rnlA_          83 SVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALT--------------PVLAASLQLTPRERDIL  148 (200)
T ss_dssp             CSCSCHHHHHHHHHTTCSEEECTTSCHHHHHHHHHHHHHSCCCCCTTTH--------------HHHHHHCCCCHHHHHHH
T ss_pred             CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--------------CCCCCCCCCCCCCCCCC
T ss_conf             4531011100001122222210012222222222222222222222222--------------11111111222111112


Q ss_pred             HHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf             34320589825189999986146788873289999999998519
Q batch____       159 SRLMLKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDKVG  202 (222)
Q Consensus       159 ~~l~~~~~~v~sr~~i~~~vw~~~~~~~~~ti~~hi~rlRkKL~  202 (222)
                      .++....    |..+|++.+     ++|++||++|+++|++||+
T Consensus       149 ~~~~~g~----s~keIA~~L-----~iS~~TV~~h~~~i~~KL~  183 (200)
T c1rnlA_         149 KLIAQGL----PNKMIARRL-----DITESTVKVHVKHMLKKMK  183 (200)
T ss_dssp             HHHHTTC----CHHHHHHHH-----TCCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCCC----CHHHHHHHH-----CCCCHHHHHHHHHHHHHCC
T ss_conf             2245677----689989886-----8870699999999999817