Emaill.a.kelley@imperial.ac.uk
DescriptionC3UPD1
DateThu Jan 5 10:56:22 GMT 2012
Unique Job ID9481017d6fde861c

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1d1p6va_



100.0 50 Fold:Small protein B (SmpB)
Superfamily:Small protein B (SmpB)
Family:Small protein B (SmpB)
2c1p6vC_



100.0 50 PDB header:rna binding protein/rna
Chain: C: PDB Molecule:ssra-binding protein;
PDBTitle: crystal structure of the trna domain of transfer-messenger2 rna in complex with smpb
3c1j1hA_



100.0 46 PDB header:rna binding protein
Chain: A: PDB Molecule:small protein b;
PDBTitle: solution structure of a tmrna-binding protein, smpb, from2 thermus thermophilus
4d1wjxa_



100.0 51 Fold:Small protein B (SmpB)
Superfamily:Small protein B (SmpB)
Family:Small protein B (SmpB)
5d2ipqx1



34.1 28 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:STY4665 C-terminal domain-like
6c2qnkA_



32.5 33 PDB header:oxidoreductase
Chain: A: PDB Molecule:3-hydroxyanthranilate 3,4-dioxygenase;
PDBTitle: crystal structure of human 3-hydroxyanthranilate 3,4-dioxygenase
7c2agaA_



23.3 14 PDB header:transcription
Chain: A: PDB Molecule:machado-joseph disease protein 1;
PDBTitle: de-ubiquitinating function of ataxin-3: insights from the2 solution structure of the josephin domain
8d1yfua1



18.0 19 Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:3-hydroxyanthranilic acid dioxygenase-like
9d1sdwa2



17.0 15 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:PHM/PNGase F
Family:Peptidylglycine alpha-hydroxylating monooxygenase, PHM
10c1wqsA_



16.5 21 PDB header:hydrolase
Chain: A: PDB Molecule:3c-like protease;
PDBTitle: crystal structure of norovirus 3c-like protease
11d1g31a_



14.1 36 Fold:GroES-like
Superfamily:GroES-like
Family:GroES
12c3jsbA_



11.9 22 PDB header:rna binding protein
Chain: A: PDB Molecule:rna-directed rna polymerase;
PDBTitle: crystal structure of the n-terminal domain of the lymphocytic2 choriomeningitis virus l protein
13c1hf9B_



11.5 21 PDB header:atpase inhibitor
Chain: B: PDB Molecule:atpase inhibitor (mitochondrial);
PDBTitle: c-terminal coiled-coil domain from bovine if1
14d2qfaa1



11.4 27 Fold:Inhibitor of apoptosis (IAP) repeat
Superfamily:Inhibitor of apoptosis (IAP) repeat
Family:Inhibitor of apoptosis (IAP) repeat
15d1zvfa1



10.0 15 Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:3-hydroxyanthranilic acid dioxygenase-like
16c2quoA_



10.0 27 PDB header:toxin
Chain: A: PDB Molecule:heat-labile enterotoxin b chain;
PDBTitle: crystal structure of c terminal fragment of clostridium2 perfringens enterotoxin
17c2w3zA_



8.9 23 PDB header:hydrolase
Chain: A: PDB Molecule:putative deacetylase;
PDBTitle: structure of a streptococcus mutans ce4 esterase
18c2oa9B_



8.7 10 PDB header:hydrolase
Chain: B: PDB Molecule:r.mvai;
PDBTitle: restriction endonuclease mvai in the absence of dna
19d2raxa1



8.3 27 Fold:Inhibitor of apoptosis (IAP) repeat
Superfamily:Inhibitor of apoptosis (IAP) repeat
Family:Inhibitor of apoptosis (IAP) repeat
20d2nlya1



7.8 19 Fold:7-stranded beta/alpha barrel
Superfamily:Glycoside hydrolase/deacetylase
Family:Divergent polysaccharide deacetylase
21d2c1ia1



not modelled 7.7 24 Fold:7-stranded beta/alpha barrel
Superfamily:Glycoside hydrolase/deacetylase
Family:NodB-like polysaccharide deacetylase
22d1m4ma_



not modelled 7.7 27 Fold:Inhibitor of apoptosis (IAP) repeat
Superfamily:Inhibitor of apoptosis (IAP) repeat
Family:Inhibitor of apoptosis (IAP) repeat
23d2qqra1



not modelled 7.6 31 Fold:SH3-like barrel
Superfamily:Tudor/PWWP/MBT
Family:Tudor domain
24d1d1na_



not modelled 7.4 20 Fold:Reductase/isomerase/elongation factor common domain
Superfamily:Translation proteins
Family:Elongation factors
25d2cc0a1



not modelled 7.4 15 Fold:7-stranded beta/alpha barrel
Superfamily:Glycoside hydrolase/deacetylase
Family:NodB-like polysaccharide deacetylase
26c3mjdA_



not modelled 6.9 22 PDB header:transferase
Chain: A: PDB Molecule:orotate phosphoribosyltransferase;
PDBTitle: 1.9 angstrom crystal structure of orotate2 phosphoribosyltransferase (pyre) francisella tularensis.
27c2ylaA_



not modelled 6.4 15 PDB header:hydrolase
Chain: A: PDB Molecule:beta-n-acetylhexosaminidase;
PDBTitle: inhibition of the pneumococcal virulence factor strh and2 molecular insights into n-glycan recognition and3 hydrolysis
28d1im3d_



not modelled 6.3 28 Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Cytomegalovirus protein US2
29d8ohma2



not modelled 6.2 24 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RNA helicase
30d1kk1a1



not modelled 6.1 36 Fold:Reductase/isomerase/elongation factor common domain
Superfamily:Translation proteins
Family:Elongation factors
31c2z59A_



not modelled 6.0 29 PDB header:protein transport
Chain: A: PDB Molecule:protein adrm1;
PDBTitle: complex structures of mouse rpn13 (22-130aa) and ubiquitin
32c2r2yA_



not modelled 6.0 29 PDB header:protein binding
Chain: A: PDB Molecule:protein adrm1;
PDBTitle: crystal structure of the proteasomal rpn13 pru-domain
33d1jd5a_



not modelled 5.9 26 Fold:Inhibitor of apoptosis (IAP) repeat
Superfamily:Inhibitor of apoptosis (IAP) repeat
Family:Inhibitor of apoptosis (IAP) repeat
34d2ieca1



not modelled 5.7 71 Fold:MK0786-like
Superfamily:MK0786-like
Family:MK0786-like
35c2crvA_



not modelled 5.5 29 PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if-2;
PDBTitle: solution structure of c-terminal domain of mitochondrial2 translational initiationfactor 2
36d2gjxa1



not modelled 5.4 15 Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-N-acetylhexosaminidase catalytic domain
37d2i52a1



not modelled 5.4 71 Fold:MK0786-like
Superfamily:MK0786-like
Family:MK0786-like
38d1jaka1



not modelled 5.4 15 Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-N-acetylhexosaminidase catalytic domain
39d1yhta1



not modelled 5.3 20 Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-N-acetylhexosaminidase catalytic domain
40d1mkya3



not modelled 5.2 9 Fold:Alpha-lytic protease prodomain-like
Superfamily:Probable GTPase Der, C-terminal domain
Family:Probable GTPase Der, C-terminal domain
41c2elvA_



not modelled 5.2 21 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 406;
PDBTitle: solution structure of the 6th c2h2 zinc finger of human2 zinc finger protein 406
42c2ogfD_



not modelled 5.1 57 PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:hypothetical protein mj0408;
PDBTitle: crystal structure of protein mj0408 from methanococcus jannaschii,2 pfam duf372