Fold library entry viewer: d1jaka1

Added to library: Tue Mar 16 14:00:16 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Y	A	W	R	S	A	M	L	D	V	S	R	H	F	F	G	V	D	E	V	K	R	Y	I	D	R	V	A	R	Y	K	Y	N	K	L	H	L	H	L	S	D	D	Q	G	W	R	I	A	I	D	S	W	P	R	L	A	T	Y	G	G	S	T	E	V	G	G	G	P	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S	S																T	T	T									B		S	S		B		B			T	T	S	T					T	T	T	S			T	T	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	Y	T	K	A	E	Y	K	E	I	V	R	Y	A	A	S	R	H	L	E	V	V	P	E	I	D	M	P	G	H	T	N	A	A	L	A	S	Y	A	E	L	N	C	D	G	V	A	P	P	L	Y	T	G	T	K	V	G	F	S	S	L	C	V	D	K	D	V	T	Y	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B															T	T										S	S	S									G	G	G	S	T	T	S								S				S						T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	V	D	D	V	I	G	E	L	A	A	L	T	P	G	R	Y	L	H	I	G	G	D	E	A	H	S	T	P	K	A	D	F	V	A	F	M	K	R	V	Q	P	I	V	A	K	Y	G	K	T	V	V	G	W	H	Q	L	A	G	A	E	P	V	E	G	A	L	V	Q	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T			S	S										T	T	S																			T	T							G	G	G	G	G	S				T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	W	G	L	D	R	T	G	D	A	E	K	A	E	V	A	E	A	A	R	N	G	T	G	L	I	L	S	P	A	D	R	T	Y	L	D	M	K	Y	T	K	D	T	P	L	G	L	S	W	A	G	Y	V	E	V	Q	R	S	Y	D	W	D	P	A	G	Y	L	P	G	A	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S														T	T								T	T	T	T		T	T	B		S	S	T	T		S	S	S	B		T	T										S			G	G	G	S	S	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	D	A	V	R	G	V	E	A	P	L	W	T	E	T	L	S	D	P	D	Q	L	D	Y	M	A	F	P	R	L	P	G	V	A	E	L	G	W	S	P	A	S	T	H	D	W	D	T	Y	K	V	R	L	A	A	Q	A	P	Y	W	E	A	A	G	I	D	F	Y	R	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G											T	T			S									T	T											S		G	G	G												T	T								T
	.	.	.	.	.	.
Sequence	P	Q	V	P	W	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S

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PDB structure

FASTA sequence

Hidden Markov model

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