Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	A	K	N	Y	A	A	L	A	R	S	V	I	A	A	L	G	G	V	D	N	I	S	A	V	T	H	C	M	T	R	L	R	F	V	I	K	D	D	A	L	I	D	S	P	T	L	K	T	I	P	G	V	L	G	V	V	R	S	D
Secondary structure
SS confidence
Disorder		?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		N	Q	C	Q	V	I	I	G	N	T	V	S	Q	A	F	Q	E	V	V	S	L	L	P	G	D	M	Q	P	A	Q	P	V	G	K	P	K	L	T	L	R	R	I	G	A	G	I	L	D	A	L	I	G	T	M	S	P	L	I	P	A
Secondary structure
SS confidence
Disorder																						?		?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?												?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		I	I	G	G	S	M	V	K	L	L	A	M	I	L	E	M	S	G	V	L	T	K	G	S	P	T	L	T	I	L	N	V	I	G	D	G	A	F	F	F	L	P	L	M	V	A	A	S	A	A	I	K	F	K	T	N	M	S	L	A
Secondary structure
SS confidence
Disorder																	?	?	?		?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		I	A	I	A	G	V	L	V	H	P	S	F	I	E	L	M	A	K	A	A	Q	G	E	H	V	E	F	A	L	I	P	V	T	A	V	K	Y	T	Y	T	V	I	P	A	L	V	M	T	W	C	L	S	Y	I	E	R	W	V	D	S
Secondary structure
SS confidence
Disorder																		?	?		?												?	?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Sequence		I	T	P	A	V	T	K	N	F	L	K	P	M	L	I	V	L	I	A	A	P	L	A	I	L	L	I	G	P	I	G	I	W	I	G	S	A	I	S	A	L	V	Y	T	I	H	G	Y	L	G	W	L	S	V	A	I	M	G	A	L
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Sequence		W	P	L	L	V	M	T	G	M	H	R	V	F	T	P	T	I	I	Q	T	I	A	E	T	G	K	E	G	M	V	M	P	S	E	I	G	A	N	L	S	L	G	G	S	S	L	A	V	A	W	K	T	K	N	P	E	L	R	Q	T
Secondary structure
SS confidence
Disorder																																					?	?																							?
Disorder confidence
		.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence		A	L	A	A	A	A	S	A	I	M	A	G	I	S	E	P	A	L	Y	G	V	A	I	R	L	K	R	P	L	I	A	S	L	I	S	G	F	I	C	G	A	V	A	G	M	A	G	L	A	S	H	S	M	A	A	P	G	L	F	T
Secondary structure
SS confidence
Disorder		?	?	?	?																	?																													?			?		?
Disorder confidence
		.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Sequence		S	V	Q	F	F	D	P	A	N	P	M	S	I	V	W	V	F	A	V	M	A	L	A	V	V	L	S	F	I	L	T	L	L	L	G	F	E	D	I	P	V	E	E	A	A	A	Q	A	R	K	Y	Q	S	V	Q	P	T	V	A	K
Secondary structure
SS confidence
Disorder						?																																	?	?	?	?	?	?	?	?	?				?	?	?	?	?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.
Sequence		E	V	S	L	N
Secondary structure
SS confidence
Disorder		?	?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 3qnq chain D Region: 92 - 475 Aligned: 382 Modelled: 384 Confidence: 100.0% Identity: 14% PDB header:membrane protein, transport protein Chain: D: PDB Molecule:pts system, cellobiose-specific iic component; PDBTitle: crystal structure of the transporter chbc, the iic component from the2 n,n'-diacetylchitobiose-specific phosphotransferase system Phyre2 PDB 3ipj chain B Region: 2 - 94 Aligned: 92 Modelled: 93 Confidence: 100.0% Identity: 28% PDB header:transferase Chain: B: PDB Molecule:pts system, iiabc component; PDBTitle: the crystal structure of one domain of the pts system, iiabc component2 from clostridium difficile Phyre2 PDB 1iba chain A Region: 8 - 82 Aligned: 74 Modelled: 75 Confidence: 99.9% Identity: 32% PDB header:phoshphotransferase Chain: A: PDB Molecule:glucose permease; PDBTitle: glucose permease (domain iib), nmr, 11 structures Phyre2 PDB 3bp8 chain C domain 1 Region: 8 - 82 Aligned: 74 Modelled: 75 Confidence: 99.9% Identity: 32% Fold: Homing endonuclease-like Superfamily: Glucose permease domain IIB Family: Glucose permease domain IIB Phyre2 PDB 3sy6 chain A Region: 27 - 50 Aligned: 24 Modelled: 24 Confidence: 46.3% Identity: 25% PDB header:cell adhesion Chain: A: PDB Molecule:fimbrial protein bf1861; PDBTitle: crystal structure of a fimbrial protein bf1861 [bacteroides fragilis2 nctc 9343] (bf1861) from bacteroides fragilis nctc 9343 at 1.90 a3 resolution Phyre2 PDB 2knc chain A Region: 433 - 469 Aligned: 37 Modelled: 37 Confidence: 42.4% Identity: 19% PDB header:cell adhesion Chain: A: PDB Molecule:integrin alpha-iib; PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex Phyre2 PDB 3t2l chain A Region: 27 - 50 Aligned: 24 Modelled: 24 Confidence: 39.0% Identity: 13% PDB header:cell adhesion Chain: A: PDB Molecule:putative cell adhesion protein; PDBTitle: crystal structure of a putative cell adhesion protein (bf1858) from2 bacteroides fragilis nctc 9343 at 2.33 a resolution Phyre2 PDB 2jan chain D Region: 6 - 48 Aligned: 42 Modelled: 43 Confidence: 34.8% Identity: 29% PDB header:ligase Chain: D: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: tyrosyl-trna synthetase from mycobacterium tuberculosis in2 unliganded state Phyre2 PDB 1i1g chain A domain 2 Region: 26 - 67 Aligned: 41 Modelled: 42 Confidence: 19.7% Identity: 12% Fold: Ferredoxin-like Superfamily: Dimeric alpha+beta barrel Family: Lrp/AsnC-like transcriptional regulator C-terminal domain Phyre2 PDB 2bbj chain B Region: 418 - 458 Aligned: 41 Modelled: 41 Confidence: 15.7% Identity: 20% PDB header:metal transport/membrane protein Chain: B: PDB Molecule:divalent cation transport-related protein; PDBTitle: crystal structure of the cora mg2+ transporter Phyre2 PDB 2hqn chain A Region: 10 - 53 Aligned: 42 Modelled: 44 Confidence: 15.4% Identity: 12% PDB header:signaling protein Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: structure of a atypical orphan response regulator protein revealed a2 new phosphorylation-independent regulatory mechanism Phyre2 PDB 1ffg chain B Region: 44 - 73 Aligned: 30 Modelled: 30 Confidence: 14.7% Identity: 13% Fold: Ferredoxin-like Superfamily: CheY-binding domain of CheA Family: CheY-binding domain of CheA Phyre2 PDB 2wsh chain C Region: 33 - 63 Aligned: 31 Modelled: 31 Confidence: 14.5% Identity: 10% PDB header:hydrolase Chain: C: PDB Molecule:endonuclease ii; PDBTitle: structure of bacteriophage t4 endoii e118a mutant Phyre2 PDB 1a0o chain H Region: 44 - 73 Aligned: 30 Modelled: 30 Confidence: 14.1% Identity: 13% PDB header:chemotaxis Chain: H: PDB Molecule:chea; PDBTitle: chey-binding domain of chea in complex with chey Phyre2 PDB 2pmu chain D Region: 5 - 53 Aligned: 43 Modelled: 49 Confidence: 13.6% Identity: 21% PDB header:transcription regulation Chain: D: PDB Molecule:response regulator phop; PDBTitle: crystal structure of the dna-binding domain of phop Phyre2 PDB 1vgg chain A Region: 57 - 83 Aligned: 27 Modelled: 27 Confidence: 13.5% Identity: 26% Fold: Ta1353-like Superfamily: Ta1353-like Family: Ta1353-like Phyre2 PDB 2xv4 chain S Region: 4 - 34 Aligned: 26 Modelled: 26 Confidence: 13.3% Identity: 19% PDB header:transcription Chain: S: PDB Molecule:dna-directed rna polymerase iii subunit rpc3; PDBTitle: structure of human rpc62 (partial) Phyre2 PDB 1gxq chain A Region: 10 - 53 Aligned: 42 Modelled: 44 Confidence: 12.8% Identity: 17% Fold: DNA/RNA-binding 3-helical bundle Superfamily: C-terminal effector domain of the bipartite response regulators Family: PhoB-like Phyre2 PDB 1ciy chain A domain 1 Region: 39 - 70 Aligned: 31 Modelled: 32 Confidence: 12.7% Identity: 19% Fold: Galactose-binding domain-like Superfamily: Galactose-binding domain-like Family: delta-Endotoxin, C-terminal domain Phyre2 PDB 1kgs chain A domain 1 Region: 10 - 53 Aligned: 40 Modelled: 44 Confidence: 12.6% Identity: 13% Fold: DNA/RNA-binding 3-helical bundle Superfamily: C-terminal effector domain of the bipartite response regulators Family: PhoB-like Phyre2 1 c3qnqD_ 2 c3ipjB_ 3 c1ibaA_ 4 d3bp8c1 5 c3sy6A_ 6 c2kncA_ 7 c3t2lA_ 8 c2janD_ 9 d1i1ga2 10 c2bbjB_ 11 c2hqnA_ 12 d1ffgb_ 13 c2wshC_ 14 c1a0oH_ 15 c2pmuD_ 16 d1vgga_ 17 c2xv4S_ 18 d1gxqa_ 19 d1ciya1 20 d1kgsa1 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3qnqD_ 100.0 14 PDB header:membrane protein, transport protein Chain: D: PDB Molecule:pts system, cellobiose-specific iic component; PDBTitle: crystal structure of the transporter chbc, the iic component from the2 n,n'-diacetylchitobiose-specific phosphotransferase system 2 c3ipjB_ 100.0 28 PDB header:transferase Chain: B: PDB Molecule:pts system, iiabc component; PDBTitle: the crystal structure of one domain of the pts system, iiabc component2 from clostridium difficile 3 c1ibaA_ 99.9 32 PDB header:phoshphotransferase Chain: A: PDB Molecule:glucose permease; PDBTitle: glucose permease (domain iib), nmr, 11 structures 4 d3bp8c1 99.9 32 Fold:Homing endonuclease-like Superfamily:Glucose permease domain IIB Family:Glucose permease domain IIB 5 c3sy6A_ 46.3 25 PDB header:cell adhesion Chain: A: PDB Molecule:fimbrial protein bf1861; PDBTitle: crystal structure of a fimbrial protein bf1861 [bacteroides fragilis2 nctc 9343] (bf1861) from bacteroides fragilis nctc 9343 at 1.90 a3 resolution 6 c2kncA_ 42.4 19 PDB header:cell adhesion Chain: A: PDB Molecule:integrin alpha-iib; PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex 7 c3t2lA_ 39.0 13 PDB header:cell adhesion Chain: A: PDB Molecule:putative cell adhesion protein; PDBTitle: crystal structure of a putative cell adhesion protein (bf1858) from2 bacteroides fragilis nctc 9343 at 2.33 a resolution 8 c2janD_ 34.8 29 PDB header:ligase Chain: D: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: tyrosyl-trna synthetase from mycobacterium tuberculosis in2 unliganded state 9 d1i1ga2 19.7 12 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Lrp/AsnC-like transcriptional regulator C-terminal domain 10 c2bbjB_ 15.7 20 PDB header:metal transport/membrane protein Chain: B: PDB Molecule:divalent cation transport-related protein; PDBTitle: crystal structure of the cora mg2+ transporter 11 c2hqnA_ 15.4 12 PDB header:signaling protein Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: structure of a atypical orphan response regulator protein revealed a2 new phosphorylation-independent regulatory mechanism 12 d1ffgb_ 14.7 13 Fold:Ferredoxin-like Superfamily:CheY-binding domain of CheA Family:CheY-binding domain of CheA 13 c2wshC_ 14.5 10 PDB header:hydrolase Chain: C: PDB Molecule:endonuclease ii; PDBTitle: structure of bacteriophage t4 endoii e118a mutant 14 c1a0oH_ 14.1 13 PDB header:chemotaxis Chain: H: PDB Molecule:chea; PDBTitle: chey-binding domain of chea in complex with chey 15 c2pmuD_ 13.6 21 PDB header:transcription regulation Chain: D: PDB Molecule:response regulator phop; PDBTitle: crystal structure of the dna-binding domain of phop 16 d1vgga_ 13.5 26 Fold:Ta1353-like Superfamily:Ta1353-like Family:Ta1353-like 17 c2xv4S_ 13.3 19 PDB header:transcription Chain: S: PDB Molecule:dna-directed rna polymerase iii subunit rpc3; PDBTitle: structure of human rpc62 (partial) 18 d1gxqa_ 12.8 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:PhoB-like 19 d1ciya1 12.7 19 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:delta-Endotoxin, C-terminal domain 20 d1kgsa1 12.6 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:PhoB-like 21 c2oarA_ not modelled 11.7 6 PDB header:membrane protein Chain: A: PDB Molecule:large-conductance mechanosensitive channel; PDBTitle: mechanosensitive channel of large conductance (mscl) 22 c1vbkA_ not modelled 10.4 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ph1313; PDBTitle: crystal structure of ph1313 from pyrococcus horikoshii ot3 23 d2bgwa1 not modelled 10.3 13 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Hef domain-like 24 d1ji6a1 not modelled 10.3 23 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:delta-Endotoxin, C-terminal domain 25 d1wlqc_ not modelled 9.3 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:DNA replication factor Cdt1 26 c3ufiA_ not modelled 9.1 17 PDB header:cell adhesion Chain: A: PDB Molecule:hypothetical protein bacova_04980; PDBTitle: crystal structure of a hypothetical protein2 bacova_04980(zp_02067969.1) from bacteroides ovatus atcc 8483 at 2.183 a resolution 27 c1p68A_ not modelled 9.1 30 PDB header:de novo protein Chain: A: PDB Molecule:de novo designed protein s-824; PDBTitle: solution structure of s-824, a de novo designed four helix2 bundle 28 c2ekmC_ not modelled 8.0 33 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:hypothetical protein st1511; PDBTitle: structure of st1219 protein from sulfolobus tokodaii 29 c2voyB_ not modelled 8.0 6 PDB header:hydrolase Chain: B: PDB Molecule:sarcoplasmic/endoplasmic reticulum calcium PDBTitle: cryoem model of copa, the copper transporting atpase from2 archaeoglobus fulgidus 30 d2oara1 not modelled 7.9 10 Fold:Gated mechanosensitive channel Superfamily:Gated mechanosensitive channel Family:Gated mechanosensitive channel 31 c1m6yA_ not modelled 7.7 20 PDB header:transferase Chain: A: PDB Molecule:s-adenosyl-methyltransferase mraw; PDBTitle: crystal structure analysis of tm0872, a putative sam-2 dependent methyltransferase, complexed with sah 32 d2cfua2 not modelled 7.7 16 Fold:Metallo-hydrolase/oxidoreductase Superfamily:Metallo-hydrolase/oxidoreductase Family:Alkylsulfatase-like 33 c2ht2B_ not modelled 7.6 11 PDB header:membrane protein Chain: B: PDB Molecule:h(+)/cl(-) exchange transporter clca; PDBTitle: structure of the escherichia coli clc chloride channel2 y445h mutant and fab complex 34 d1ngka_ not modelled 7.3 26 Fold:Globin-like Superfamily:Globin-like Family:Truncated hemoglobin 35 c2gl0A_ not modelled 7.3 33 PDB header:transferase Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: structure of pae2307 in complex with adenosine 36 c3ksiA_ not modelled 7.1 20 PDB header:oxidoreductase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: structure of frmsr of staphylococcus aureus (complex with 2-propanol) 37 c2d16B_ not modelled 7.0 26 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein ph1918; PDBTitle: crystal structure of ph1918 protein from pyrococcus horikoshii ot3 38 c2djwF_ not modelled 7.0 13 PDB header:unknown function Chain: F: PDB Molecule:probable transcriptional regulator, asnc family; PDBTitle: crystal structure of ttha0845 from thermus thermophilus hb8 39 c2cfuA_ not modelled 6.6 16 PDB header:hydrolase Chain: A: PDB Molecule:sdsa1; PDBTitle: crystal structure of sdsa1, an alkylsulfatase from2 pseudomonas aeruginosa, in complex with 1-decane-sulfonic-3 acid. 40 c2jzyA_ not modelled 6.3 19 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein pcor; PDBTitle: solution structure of c-terminal effector domain of2 putative two-component-system response regulator involved3 in copper resistance from klebsiella pneumoniae 41 c1oy8A_ not modelled 6.2 21 PDB header:membrane protein Chain: A: PDB Molecule:acriflavine resistance protein b; PDBTitle: structural basis of multiple drug binding capacity of the acrb2 multidrug efflux pump 42 c2ketA_ not modelled 6.2 29 PDB header:antibiotic Chain: A: PDB Molecule:cathelicidin-6; PDBTitle: solution structure of bmap-27 43 c1lkzB_ not modelled 6.1 26 PDB header:isomerase Chain: B: PDB Molecule:ribose 5-phosphate isomerase a; PDBTitle: crystal structure of d-ribose-5-phosphate isomerase (rpia)2 from escherichia coli. 44 c1dlcA_ not modelled 6.0 21 PDB header:toxin Chain: A: PDB Molecule:delta-endotoxin cryiiia; PDBTitle: crystal structure of insecticidal delta-endotoxin from2 bacillus thuringiensis at 2.5 angstroms resolution 45 d1fzda_ not modelled 6.0 30 Fold:Fibrinogen C-terminal domain-like Superfamily:Fibrinogen C-terminal domain-like Family:Fibrinogen C-terminal domain-like 46 c2kscA_ not modelled 6.0 19 PDB header:unknown function Chain: A: PDB Molecule:cyanoglobin; PDBTitle: solution structure of synechococcus sp. pcc 7002 hemoglobin 47 c3ibwA_ not modelled 5.9 26 PDB header:transferase Chain: A: PDB Molecule:gtp pyrophosphokinase; PDBTitle: crystal structure of the act domain from gtp2 pyrophosphokinase of chlorobium tepidum. northeast3 structural genomics consortium target ctr148a 48 c3aq8A_ not modelled 5.8 22 PDB header:oxygen binding Chain: A: PDB Molecule:group 1 truncated hemoglobin; PDBTitle: crystal structure of truncated hemoglobin from tetrahymena pyriformis,2 q46e mutant, fe(iii) form 49 d2cfxa2 not modelled 5.7 13 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Lrp/AsnC-like transcriptional regulator C-terminal domain 50 c3k8hA_ not modelled 5.5 14 PDB header:membrane protein Chain: A: PDB Molecule:30klp; PDBTitle: structure of crystal form i of tp0453 51 d2cg4a2 not modelled 5.5 13 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Lrp/AsnC-like transcriptional regulator C-terminal domain 52 d1vbka2 not modelled 5.5 12 Fold:THUMP domain Superfamily:THUMP domain-like Family:THUMP domain 53 d1p2fa1 not modelled 5.5 24 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:PhoB-like 54 d1s69a_ not modelled 5.3 19 Fold:Globin-like Superfamily:Globin-like Family:Truncated hemoglobin 55 c2j61B_ not modelled 5.3 39 PDB header:lectin Chain: B: PDB Molecule:ficolin-2; PDBTitle: l-ficolin complexed to n-acetylglucosamine (forme c) 56 d1m1jc1 not modelled 5.1 30 Fold:Fibrinogen C-terminal domain-like Superfamily:Fibrinogen C-terminal domain-like Family:Fibrinogen C-terminal domain-like 57 d1x0pa1 not modelled 5.1 21 Fold:Ferredoxin-like Superfamily:Acylphosphatase/BLUF domain-like Family:BLUF domain 58 d1lwub1 not modelled 5.1 22 Fold:Fibrinogen C-terminal domain-like Superfamily:Fibrinogen C-terminal domain-like Family:Fibrinogen C-terminal domain-like

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0