Job Description P0AC13 Confidence 91.60% Date Thu Jan 5 11:16:53 GMT 2012 Rank 129 Aligned Residues 208 % Identity 13% Template c1vliA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:spore coat polysaccharide biosynthesis protein spse; PDBTitle: crystal structure of spore coat polysaccharide biosynthesis protein2 spse (bsu37870) from bacillus subtilis at 2.38 a resolution Resolution 2.38 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.										.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure										.																							.																						.	.	.	.	.	.	.	.	.
Query SS confidence										.																							.																						.	.	.	.	.	.	.	.	.
Query Sequence		Q	G	T	S	L	D	L	S	.	H	P	H	V	M	G	I	L	N	V	T	P	D	S	F	S	D	G	G	T	H	N	.	S	L	I	D	A	V	K	H	A	N	L	M	I	N	A	G	A	T	I	I	D	.	.	.	.	.	.	.	.	.	V	G	G	E	S	T	R	P	G	A	A	E	V	S	V	E	E	E
Query Conservation										.																							.																						.	.	.	.	.	.	.	.	.
Alig confidence										.												.	.	.	.	.	.	.	.	.			.																						.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.
Template Sequence		A	N	K	T	V	G	K	D	A	P	V	F	I	I	A	E	A	G	I	N	.	.	.	.	.	.	.	.	.	H	D	G	K	L	D	Q	A	F	A	L	I	D	A	A	A	E	A	G	A	D	A	V	K	F	Q	X	F	Q	A	D	R	X	Y	Q	K	D	P	D	V	S	I	F	S	L	V	Q	S	X	E	X
Template Known Secondary structure		T	T					T	T	S										T	T	.	.	.	.	.	.	.	.	.	T	T	T																T		S							B		G	G	G	G	T	S											G	G	G	B	S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.										.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		L	Q	R	V	I	P	V	V	E	A	I	A	Q	R	F	E	V	W	I	S	V	D	T	S	K	P	E	V	I	R	E	S	A	K	V	G	A	H	I	I	N	D	I	R	S	L	.	S	E	P	G	A	L	E	A	A	A	E	T	G	L	P	V	C	L	M	H	M	Q	G	N	P	K	T	M	Q	E	A	P	K
Query Conservation																																																.
Alig confidence																																																.																									.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		P	A	E	W	I	L	P	L	L	D	Y	C	R	E	K	Q	V	I	F	L	S	T	V	C	D	E	G	S	A	D	L	L	Q	S	T	S	P	S	A	F	K	I	A	S	Y	E	I	N	H	L	P	L	L	K	Y	V	A	R	L	N	R	P	X	I	F	S	T	A	G	A	E	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			G	G	G											T	T						B			S									T	T			S						G	G	G	T	T										T	T		S							T	T			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		Y	D	D	V	F	A	E	V	N	R	Y	F	I	E	Q	I	A	R	C	E	Q	A	G	I	A	K	E	K	L	L	L	D	P	G	F	G	F	G	K	N	L	S	H	N	Y	S	L	L	A	R	L	A	E	F	H	H	F	N	L	P	.	L	L	V	G	M	S	R	K	S	M	I	G	Q	L	L	N	V	G	P
Query Conservation																																																														.
Alig confidence		.	.	.	.	.	.	.	.																.																						.	.										.				.											.	.	.	.	.		.	.	.
Template Conservation		.	.	.	.	.	.	.	.																.																						.	.										.															.	.	.	.	.		.	.	.
Template Sequence		.	.	.	.	.	.	.	.	I	S	D	V	H	E	A	W	R	T	I	R	A	E	G	.	N	N	Q	I	A	I	X	H	C	V	A	K	Y	P	A	P	P	E	Y	S	N	.	.	L	S	V	I	P	X	L	A	A	.	A	F	P	E	A	V	I	G	F	S	D	H	S	E	.	.	.	.	.	H	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.													T	T	T	.											S	S	S	S			G	G	G			.	.	T	T								.		S	T	T	S									S	.	.	.	.	.	S	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																.																						.	.										.															.	.	.	.	.		.	.	.
Template SS confidence
										158	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.						.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	R	L	S	G	S	L	A	C	A	V	I	A	A	M	Q	G	A	H	I	I	R	V	H
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	P	T	E	A	P	C	A	A	V	R	L	G	A	K	L	I	E	K	H
Template Known Secondary structure		.	.	.	.	.	.	S	S									T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions