129 c1vliA_ Probab=91.60   E-value=1.1  Score=24.54  Aligned_columns=208  Identities=13%

Q ss_pred             CCCEEECC-CCEEEEEEECCCCCCCCCCCCC-CHHHHHHHHHHHHHCCCCEEE---------ECCCCCCCCCCCCCHHHH
Q ss_conf             69674279-9869999856753147886568-989999999999987997999---------878337898766896899
Q batch____         6 QGTSLDLS-HPHVMGILNVTPDSFSDGGTHN-SLIDAVKHANLMINAGATIID---------VGGESTRPGAAEVSVEEE   74 (282)
Q Consensus         6 ~~~~~~~~-~~~imgilN~tpdSFsdgg~~~-~~~~a~~~a~~~~~~GAdiID---------IG~eSTrPga~~v~~~eE   74 (282)
                      +||.+... +|.|.+=+-+.         |. +.+.|.+-...-.+.|||-|-         +-..+..+..+....-+-
T Consensus         6 ~~~~ig~~~~~~IIAEig~N---------H~Gdl~~A~~lI~~A~~aGadaVKFQt~~~~~~~~~~~~~~~~~~~~~~el   76 (358)
T c1vliA_           6 ANKTVGKDAPVFIIAEAGIN---------HDGKLDQAFALIDAAAEAGADAVKFQXFQADRXYQKDPDVSIFSLVQSXEX   76 (358)
T ss_dssp             TTEEEETTSCCEEEEEEETT---------TTTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCCCCCHHHHGGGBSS
T ss_pred             CCEEECCCCCEEEEEECCCC---------CCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCC
T ss_conf             88985799965999762203---------578789999999999971997898420142100156556304577753169


Q ss_pred             HHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCEEECCCCC-CCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC
Q ss_conf             9999999999997449849997799899999997099468707668-888799999972994999878989987110775
Q batch____        75 LQRVIPVVEAIAQRFEVWISVDTSKPEVIRESAKVGAHIINDIRSL-SEPGALEAAAETGLPVCLMHMQGNPKTMQEAPK  153 (282)
Q Consensus        75 ~~rl~p~i~~i~~~~~vpISIDT~~~~v~~aal~~G~~iINdvsg~-~d~~~~~~~a~~~~~vVlmh~~g~p~~~~~~~~  153 (282)
                      -..-...+....+..++...---|+.+-+....+.|++++-=-|+. ++-.++.-++++|.|+|+..=-.+         
T Consensus        77 ~~e~~~~L~~~~~~~Gi~f~sTpfd~~svd~l~~~~v~~~KIaS~el~n~pLL~~~A~~gkPvilSTGmat---------  147 (358)
T c1vliA_          77 PAEWILPLLDYCREKQVIFLSTVCDEGSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPXIFSTAGAE---------  147 (358)
T ss_dssp             CGGGHHHHHHHHHHTTCEEECBCCSHHHHHHHHTTCCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCC---------
T ss_pred             CHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCEEEECHHHCCCHHHHHHHHHCCCCEEEECCCCC---------
T ss_conf             98999999999997598299834799999999863998699841227988999999631897185135468---------


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCC-EEEEECCHHHHHHHHCCCH
Q ss_conf             001799999999999999997699876788807887647978999999989999966998-8996354468776738998
Q batch____       154 YDDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLP-LLVGMSRKSMIGQLLNVGP  232 (282)
Q Consensus       154 ~~~~~~e~~~~l~~~i~~a~~~GI~~~~IilDPGiGf~k~~~~~~~ll~~i~~~~~lg~P-il~G~SrKsfig~~~~~~~  232 (282)
                              ...++..++.+.+.| ..+=+++----++-...++.-  |+.++.+++ -+| +-+|.|--+.     |   
T Consensus       148 --------l~Ei~~Av~~i~~~g-~~~i~llhC~s~YP~p~~~~n--L~~i~~L~~-~f~~~~vG~SDHt~-----g---  207 (358)
T c1vliA_         148 --------ISDVHEAWRTIRAEG-NNQIAIXHCVAKYPAPPEYSN--LSVIPXLAA-AFPEAVIGFSDHSE-----H---  207 (358)
T ss_dssp             --------HHHHHHHHHHHHTTT-CCCEEEEEECSSSSCCGGGCC--TTHHHHHHH-HSTTSEEEEEECCS-----S---
T ss_pred             --------HHHHHHHHHHHHHCC-CCCEEEEECCCCCCCCHHHCC--HHHHHHHHH-HCCCCEECCCCCCC-----C---
T ss_conf             --------899999999999679-984899955888898866737--467899997-51786021477665-----5---


Q ss_pred             HHHHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf             8835579999999997599899919
Q batch____       233 SERLSGSLACAVIAAMQGAHIIRVH  257 (282)
Q Consensus       233 ~~r~~~t~~~~~~a~~~Ga~iiRvH  257 (282)
                            ...+...|+..||.+|--|
T Consensus       208 ------~~~~~~aAvalGA~vIEKH  226 (358)
T c1vliA_         208 ------PTEAPCAAVRLGAKLIEKH  226 (358)
T ss_dssp             ------SSHHHHHHHHTTCSEEEEE
T ss_pred             ------CCHHHHHHHHCCCEEEEEE
T ss_conf             ------4035688863030000224