Job Description P0AC13 Confidence 97.84% Date Thu Jan 5 11:16:53 GMT 2012 Rank 29 Aligned Residues 214 % Identity 14% Template c1rr2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:transcarboxylase 5s subunit; PDBTitle: propionibacterium shermanii transcarboxylase 5s subunit bound to 2-2 ketobutyric acid Resolution 2.00 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																				.				.
Query SS confidence																				.				.
Query Sequence		T	S	L	D	L	S	H	P	H	V	M	G	I	L	N	V	T	P	.	D	S	F	.	S	D	G	G	T	H	N	S	L	I	D	A	V	K	H	A	N	L	M	I	N	A	G	A	T	I	I	D	V	G	G	E	S	T	R	P	G	A	A	E	V	S	V	E	E	E	L	Q	R	V	I	P	V	V	E	A	I
Query Conservation																				.				.
Alig confidence																				.				.
Template Conservation
Template Sequence		R	E	I	E	V	S	E	P	R	E	V	G	I	T	E	L	V	L	R	D	A	H	Q	S	L	M	A	T	R	M	A	M	E	D	M	V	G	A	C	A	D	I	D	A	A	G	Y	W	S	V	E	C	W	G	G	A	T	Y	D	S	C	I	R	F	L	N	E	D	P	W	E	R	L	R	T	F	R	K	L	M
Template Known Secondary structure									S									T	T	T								T	T				G	G	G	T	G	G	G						T	S			S							T	T								T	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100															.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.					.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.																.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.																.	.
Query Sequence		A	Q	R	F	E	V	W	I	S	V	D	T	S	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	I	R	E	S	A	K	V	G	A	H	I	I	N	D	I	R	S	L	S	E	.	.	.	.	P	G	A	L	E	A	A	A	E	T	G	L	P	V	C	.	.	L	M	H	M	Q	G	N	P
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.																.	.
Alig confidence		.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.																.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	P	N	S	R	L	Q	M	L	L	R	G	Q	N	L	L	G	Y	R	H	Y	N	D	E	V	V	D	R	F	V	D	K	S	A	E	N	G	M	D	V	F	R	V	F	D	A	M	N	D	P	R	N	M	A	H	A	M	A	A	V	K	K	A	G	K	H	A	Q	G	T	I	C	Y	T	I	S	P	V
Template Known Secondary structure		.	.	.	T	T	S								G	G	G	T	T	S	S	S																	T	T									T	T			T													T	T													T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		K	T	M	Q	E	A	P	K	Y	D	D	V	F	A	E	V	N	R	Y	F	I	E	Q	I	A	R	C	E	Q	A	G	I	A	K	E	K	L	L	L	D	P	G	F	G	F	G	K	N	L	S	H	N	Y	S	L	L	A	R	L	A	E	F	H	H	F	N	L	P	L	.	L	V	G	M	S	R	K	S	M	I
Query Conservation																																																																							.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.												.																							.					.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.												.																												.	.	.	.	.	.
Template Sequence		H	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	Y	V	K	L	A	G	Q	L	L	D	M	G	A	D	.	.	S	I	A	L	K	D	M	A	A	L	L	.	K	P	Q	P	A	Y	D	I	I	K	A	I	K	D	T	Y	G	Q	K	T	Q	I	N	L	H	C	H	.	.	.	.	.	.
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T		S	.	.							T	T				.																		T	T								B	.	.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.												.																												.	.	.	.	.	.
Template SS confidence
		161	.	.															.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	L	L	N	V	G	P	S	E	R	L	S	G	S	L	A	C	A	V	I	A	A	M	Q	G	A	H	I	I	R	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	S	T	T	G	V	T	E	V	S	L	M	K	A	I	E	A	G	V	D	V	V	D	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.		T	T	S												T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions